Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 1.7e-137 492.7 243 100.0
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 1.9e-112 409.5 243 85.2
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 8.9e-107 390.6 245 77.6
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 7.8e-95 350.9 245 68.6
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 1.5e-93 346.7 242 67.8
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 4.3e-93 345.1 245 68.2
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 7.3e-93 344.4 246 67.9
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 2.8e-92 342.4 238 67.6
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 8.1e-92 340.9 246 64.2
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 1.4e-91 340.1 234 69.7
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.2e-90 337.0 248 65.3
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 7.6e-90 334.3 246 64.6
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 1.7e-89 333.2 226 69.0
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 3.8e-89 332.0 242 66.1
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 1.2e-87 327.0 248 65.3
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.5e-87 325.5 248 64.5
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 6.0e-87 324.7 223 70.0
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 7.9e-87 324.3 248 64.5
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.0e-86 322.4 248 63.7
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 5.1e-86 321.6 243 60.1
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 6.7e-86 321.2 248 64.1
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 6.7e-86 321.2 244 60.7
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 7.4e-85 317.8 244 60.2
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 2.8e-84 315.8 241 61.0
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 1.1e-83 313.9 247 63.6
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 1.4e-83 313.5 244 61.5
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 1.2e-82 310.5 243 62.6
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 7.6e-82 307.8 242 62.4
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 2.9e-81 305.8 215 64.7
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 2.9e-81 305.8 245 57.1
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 2.5e-80 302.8 217 63.6
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 3.2e-80 302.4 225 62.2
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 4.2e-80 302.0 227 63.0
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 7.1e-80 301.2 242 59.9
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 6.0e-79 298.1 244 58.6
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 7.9e-79 297.7 227 62.1
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 1.8e-78 296.6 240 57.9
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 8.7e-78 294.3 224 61.6
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 2.5e-77 292.7 224 62.1
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 2.5e-77 292.7 234 59.0
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 1.6e-76 290.0 244 57.8
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 2.8e-76 289.3 224 61.6
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 3.7e-76 288.9 244 57.0
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 2.4e-75 286.2 244 56.1
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 2.4e-75 286.2 236 55.1
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 2.4e-75 286.2 238 57.1
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 9.0e-75 284.3 217 61.8
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 2.0e-74 283.1 208 62.5
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 2.0e-74 283.1 210 62.9
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 1.7e-73 280.0 249 57.0
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 6.5e-73 278.1 233 54.5
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 1.1e-72 277.3 241 55.6
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 1.1e-72 277.3 234 55.1
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 4.2e-72 275.4 247 55.5
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 5.5e-72 275.0 247 55.9
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 2.1e-71 273.1 233 57.9
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 3.5e-71 272.3 241 52.3
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 3.0e-70 269.2 221 59.3
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 3.9e-70 268.9 243 57.2
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 6.7e-70 268.1 243 56.8
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 1.1e-69 267.3 242 50.8
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 1.5e-69 266.9 245 52.7
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 6.9e-67 258.1 245 51.8
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 1.2e-66 257.3 245 51.8
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 7.2e-64 248.1 245 52.7
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 2.7e-63 246.1 243 51.4
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 3.6e-63 245.7 232 51.7
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 1.4e-62 243.8 218 52.8
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 3.9e-62 242.3 180 66.7
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 6.7e-62 241.5 238 50.0
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 2.0e-61 240.0 193 59.1
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.3e-60 237.3 236 45.8
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 6.3e-60 235.0 240 48.8
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 1.1e-59 234.2 239 49.8
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 1.2e-58 230.7 210 54.3
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 1.5e-58 230.3 220 50.9
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 5.9e-58 228.4 157 68.2
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 1.4e-56 223.8 217 49.3
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 6.1e-55 218.4 191 53.4
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.8e-54 216.9 226 45.1
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 1.5e-53 213.8 246 46.3
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 7.0e-51 204.9 187 54.0
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 1.2e-50 204.1 233 42.1
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 2.9e-41 172.9 159 56.6
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 1.2e-39 167.5 152 57.2
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 3.5e-34 149.4 166 45.2
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 1.4e-30 137.5 96 65.6
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 5.2e-22 109.0 80 58.8
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 2.6e-21 106.7 107 43.9
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 5.2e-14 82.4 169 28.4


User provided reference genes

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