Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000858 Carpinus fangiana HOM05D000041 ORTHO05D124165 8.2e-82 307.0 153 100.0
Haze_25478 Corylus avellana HOM05D000166 ORTHO05D001532 1.0e-60 236.9 138 84.1
Cfa002291 Carpinus fangiana HOM05D000041 ORTHO05D001532 2.4e-57 225.7 138 84.1
CiPaw.03G249700 Carya illinoinensis HOM05D000041 ORTHO05D001532 2.0e-32 142.9 139 56.1
QL02p090175 Quercus lobata HOM05D000041 ORTHO05D001532 3.5e-32 142.1 138 57.2
CiPaw.04G176100 Carya illinoinensis HOM05D000041 ORTHO05D001532 1.5e-30 136.7 139 54.7
TWI63G0329 Tripterygium wilfordii HOM05D000041 ORTHO05D001532 9.5e-30 134.0 149 53.0
Dinv36468 Davidia involucrata HOM05D000041 ORTHO05D001532 8.9e-28 127.5 122 54.9
Dinv36470 Davidia involucrata HOM05D000041 ORTHO05D001532 8.9e-28 127.5 122 54.9
Prupe.7G250000 Prunus persica HOM05D000041 ORTHO05D001532 5.8e-27 124.8 137 48.2
Actinidia21940 Actinidia chinensis HOM05D000041 ORTHO05D001532 3.7e-26 122.1 122 56.6
Potri.018G124600 Populus trichocarpa HOM05D000041 ORTHO05D001532 6.4e-26 121.3 141 49.6
PGR083G1447 Punica granatum HOM05D000041 ORTHO05D001532 8.3e-26 120.9 140 48.6
FAN26G2277 Fragaria x ananassa HOM05D000166 ORTHO05D001532 1.9e-25 119.8 138 49.3
Actinidia07327 Actinidia chinensis HOM05D000041 ORTHO05D001532 5.4e-25 118.2 122 55.7
FAN23G1148 Fragaria x ananassa HOM05D000041 ORTHO05D001532 5.4e-25 118.2 138 47.8
FAN23G3037 Fragaria x ananassa HOM05D000166 ORTHO05D001532 5.4e-25 118.2 138 47.8
DCAR_017775 Daucus carota HOM05D000041 ORTHO05D001532 2.0e-24 116.3 141 46.8
RcHm_v2.0_Chr2g0087441 Rosa chinensis HOM05D000041 ORTHO05D001532 7.8e-24 114.4 139 47.5
Cpa.g.c33874 Carica papaya HOM05D000166 ORTHO05D001532 1.0e-23 114.0 138 47.1
HanXRQChr03g0063171 Helianthus annuus HOM05D000041 ORTHO05D001532 1.0e-23 114.0 143 48.3
CSS0030995 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D001532 1.3e-23 113.6 122 51.6
CANSAT11G1406 Cannabis sativa HOM05D000041 ORTHO05D001532 1.3e-23 113.6 140 45.0
FvH4_1g02470 Fragaria vesca HOM05D000041 ORTHO05D001532 1.3e-23 113.6 138 46.4
FAN28G2082 Fragaria x ananassa HOM05D000041 ORTHO05D001532 1.3e-23 113.6 138 46.4
Potri.006G064200 Populus trichocarpa HOM05D000041 ORTHO05D001532 1.7e-23 113.2 136 47.1
FAN19G0477 Fragaria x ananassa HOM05D000041 ORTHO05D001532 2.3e-23 112.8 138 46.4
ECA240G3078 Erigeron canadensis HOM05D000041 ORTHO05D001532 3.9e-23 112.1 142 46.5
Hma1.2p1_0343F.1_g130870 Hydrangea macrophylla HOM05D000041 ORTHO05D001532 1.5e-22 110.2 140 49.3
Sabra06G0046900 Salix brachista HOM05D000041 ORTHO05D001532 2.5e-22 109.4 142 45.8
Duzib187G0922 Durio zibethinus HOM05D000041 ORTHO05D001532 4.3e-22 108.6 139 46.8
Oeu052753.1 Olea europaea HOM05D000041 ORTHO05D001532 4.3e-22 108.6 120 48.3
Oeu055958.1 Olea europaea HOM05D000166 ORTHO05D001532 4.3e-22 108.6 117 47.9
CSS0015295 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D001532 7.3e-22 107.8 123 50.4
Manes.14G117100 Manihot esculenta HOM05D000041 ORTHO05D001532 2.1e-21 106.3 144 45.1
Lsat_1_v5_gn_7_44381 Lactuca sativa HOM05D000166 ORTHO05D001532 4.7e-21 105.1 142 46.5
Lj7A436G59 Lonicera japonica HOM05D000166 ORTHO05D001532 1.1e-20 104.0 141 46.1
Glyma.13G161700 Glycine max HOM05D000041 ORTHO05D001532 1.4e-20 103.6 138 46.4
VMungo1215G2068 Vigna mungo HOM05D000041 ORTHO05D001532 1.4e-20 103.6 139 46.0
Glyma.17G109600 Glycine max HOM05D000041 ORTHO05D001532 2.3e-20 102.8 106 51.9
Lj4g0013035 Lotus japonicus HOM05D000041 ORTHO05D001532 4.0e-20 102.1 139 46.8
arahy.Tifrunner.gnm1.ann1.Z11XNF Arachis hypogaea HOM05D000041 ORTHO05D001532 6.8e-20 101.3 140 47.1
Eucgr.E03523 Eucalyptus grandis HOM05D000041 ORTHO05D001532 8.9e-20 100.9 145 44.8
arahy.Tifrunner.gnm1.ann1.LA756D Arachis hypogaea HOM05D000041 ORTHO05D001532 1.2e-19 100.5 140 44.3
Lsat_1_v5_gn_5_93661 Lactuca sativa HOM05D000041 ORTHO05D001532 2.0e-19 99.8 134 43.3
ClCG06G011630 Citrullus lanatus HOM05D000041 ORTHO05D001532 2.6e-19 99.4 114 50.0
Eucgr.C04322 Eucalyptus grandis HOM05D000166 ORTHO05D001532 2.6e-19 99.4 153 45.8
Oeu000518.1 Olea europaea HOM05D000041 ORTHO05D001532 2.6e-19 99.4 144 43.1
TAR626G1875 Trochodendron aralioides HOM05D000041 ORTHO05D001532 2.6e-19 99.4 102 51.0
GSVIVG01012827001 Vitis vinifera HOM05D000041 ORTHO05D001532 3.4e-19 99.0 141 42.6
TPR.G7620 Trifolium pratense HOM05D000041 ORTHO05D001532 5.8e-19 98.2 137 43.8
Medtr4g115630 Medicago truncatula HOM05D000041 ORTHO05D001532 1.3e-18 97.1 137 43.1
vmacro07732 Vaccinium macrocarpon HOM05D000041 ORTHO05D001532 1.3e-18 97.1 135 43.0
TAR625G1015 Trochodendron aralioides HOM05D000041 ORTHO05D001532 1.7e-18 96.7 121 45.5
MELO3C010298.2 Cucumis melo HOM05D000041 ORTHO05D001532 2.9e-18 95.9 124 46.0
CsaV3_1G027920 Cucumis sativus L. HOM05D000041 ORTHO05D001532 2.9e-18 95.9 137 44.5
Lalb_Chr07g0179321 Lupinus albus HOM05D000041 ORTHO05D001532 2.9e-18 95.9 137 44.5
Cc06_g07900 Coffea canephora HOM05D000041 ORTHO05D001532 8.3e-18 94.4 152 39.5
MBI15_g16752_MAGBIO Magnolia biondii HOM05D000041 ORTHO05D001532 1.4e-17 93.6 138 38.4
PGR102G2728 Punica granatum HOM05D000166 ORTHO05D001532 1.4e-17 93.6 149 42.3
Sabra18G0106000 Salix brachista HOM05D000041 ORTHO05D001532 1.4e-17 93.6 114 50.0
HPP92_022032 Vanilla planifolia HOM05D000041 ORTHO05D001532 1.4e-17 93.6 140 36.4
Hma1.2p1_0497F.1_g166490 Hydrangea macrophylla HOM05D000041 ORTHO05D001532 2.4e-17 92.8 123 45.5
Duzib168G0103 Durio zibethinus HOM05D000041 ORTHO05D001532 4.1e-17 92.0 104 48.1
Sed0023441 Sechium edule HOM05D000041 ORTHO05D001532 5.4e-17 91.7 114 47.4
Phvul.003G170200 Phaseolus vulgaris HOM05D000041 ORTHO05D001532 7.1e-17 91.3 137 43.1
Oeu052180.1 Olea europaea HOM05D000041 ORTHO05D001532 1.2e-16 90.5 139 38.8
Atru.chr7.1965 Acer truncatum HOM05D000041 ORTHO05D001532 1.6e-16 90.1 154 38.3
MD15G1164700 Malus domestica HOM05D000041 ORTHO05D001532 2.1e-16 89.7 162 34.6
Thecc.09G134400 Theobroma cacao HOM05D000041 ORTHO05D001532 2.7e-16 89.4 139 38.8
Ciclev10008662m.g Citrus clementina HOM05D000041 ORTHO05D001532 6.0e-16 88.2 102 49.0
ECA234G4719 Erigeron canadensis HOM05D000041 ORTHO05D001532 7.8e-16 87.8 103 46.6
Gohir.A08G237900 Gossypium hirsutum HOM05D000041 ORTHO05D001532 2.3e-15 86.3 135 38.5
HanXRQChr10g0314461 Helianthus annuus HOM05D000041 ORTHO05D001532 2.3e-15 86.3 99 49.5
MSTRG.26347 Avicennia marina HOM05D000041 ORTHO05D001532 3.0e-15 85.9 123 41.5
Gorai.004G275500 Gossypium raimondii HOM05D000041 ORTHO05D001532 3.0e-15 85.9 122 41.0
Migut.K00418 Erythranthe guttata HOM05D000041 ORTHO05D001532 3.9e-15 85.5 127 40.2
Peaxi162Scf00088g01117 Petunia axillaris HOM05D000041 ORTHO05D001532 3.9e-15 85.5 126 38.9
SGA_v2.0_scaffold63G21802 Striga asiatica HOM05D000041 ORTHO05D001532 8.6e-15 84.3 112 43.8
Gohir.D08G258300 Gossypium hirsutum HOM05D000041 ORTHO05D001532 1.9e-14 83.2 135 39.3
PGSC0003DMG400027940 Solanum tuberosum HOM05D000041 ORTHO05D001532 2.5e-14 82.8 126 37.3
Solyc07g007780.3 Solanum lycopersicum HOM05D000041 ORTHO05D001532 3.3e-14 82.4 126 37.3
Sopen07g001070 Solanum pennellii HOM05D000041 ORTHO05D001532 7.3e-14 81.3 126 37.3
Nitab4.5_0011105g0010 Nicotiana tabacum HOM05D000041 ORTHO05D001532 9.5e-14 80.9 114 41.2
Rhsim01G0060300 Rhododendron simsii HOM05D000041 ORTHO05D001532 9.5e-14 80.9 174 34.5
HanXRQChr12g0356841 Helianthus annuus HOM05D000041 ORTHO05D001532 1.2e-13 80.5 108 42.6
Gohir.D06G052100 Gossypium hirsutum HOM05D000041 ORTHO05D001532 2.1e-13 79.7 139 35.3
Gorai.010G060400 Gossypium raimondii HOM05D000041 ORTHO05D001532 2.1e-13 79.7 139 35.3
CAN.G1504.1 Capsicum annuum HOM05D000041 ORTHO05D001532 2.8e-13 79.3 126 36.5
Aqoxy7G03621 Aquilegia oxysepala HOM05D000041 ORTHO05D001532 4.7e-13 78.6 138 37.0
Gohir.A06G053100 Gossypium hirsutum HOM05D000041 ORTHO05D001532 6.2e-13 78.2 139 34.5
Sc18g0000260 Simmondsia chinensis HOM05D000166 ORTHO05D001532 6.2e-13 78.2 145 40.7
THA.LOC104808959 Tarenaya hassleriana HOM05D000041 ORTHO05D001532 8.1e-13 77.8 115 35.7
TAR636G0444 Trochodendron aralioides HOM05D000041 ORTHO05D001532 1.4e-12 77.0 110 44.5
MD02G1022200 Malus domestica HOM05D000041 ORTHO05D001532 3.1e-12 75.9 150 32.0
Duzib150G1053 Durio zibethinus HOM05D000041 ORTHO05D001532 4.0e-12 75.5 139 36.7
Hund21572 Selenicereus undatus HOM05D000041 ORTHO05D001532 6.8e-12 74.7 162 35.8
CARHR104950 Cardamine hirsuta HOM05D000041 ORTHO05D001532 1.2e-11 73.9 145 32.4
PSO210G5474 Papaver somniferum HOM05D000041 ORTHO05D001532 1.2e-11 73.9 123 38.2
Psat4g035960 Pisum sativum HOM05D000166 ORTHO05D001532 1.2e-11 73.9 137 38.0
Hund09294 Selenicereus undatus HOM05D000041 ORTHO05D001532 2.0e-11 73.2 142 40.1
THA.LOC104826557 Tarenaya hassleriana HOM05D000041 ORTHO05D001532 2.6e-11 72.8 110 37.3
A03p44810 Brassica napus HOM05D000041 ORTHO05D001532 3.4e-11 72.4 103 39.8
BraA03t13616Z Brassica rapa HOM05D000041 ORTHO05D001532 3.4e-11 72.4 103 39.8
BcaC01g03140 Brassica carinata HOM05D000041 ORTHO05D001532 4.4e-11 72.0 103 39.8
Nn8g39577 Nelumbo nucifera HOM05D000041 ORTHO05D001532 4.4e-11 72.0 146 34.9
Carub.0003s2770 Capsella rubella HOM05D000041 ORTHO05D001532 9.9e-11 70.9 144 31.2
PSO210G2809 Papaver somniferum HOM05D000041 ORTHO05D001532 9.9e-11 70.9 150 31.3
Ca_21661_v3 Cicer arietinum L. HOM05D000041 ORTHO05D001532 1.7e-10 70.1 143 35.0
AT2G11520 Arabidopsis thaliana HOM05D000041 ORTHO05D001532 2.2e-10 69.7 144 31.2
BolC3t17844H Brassica oleracea HOM05D000041 ORTHO05D001532 2.9e-10 69.3 103 38.8
Gohir.A05G014000 Gossypium hirsutum HOM05D000041 ORTHO05D001532 6.4e-10 68.2 100 41.0
Sed0011966 Sechium edule HOM05D000041 ORTHO05D001532 1.1e-09 67.4 123 37.4
SEGI_33196 Sequoiadendron giganteum HOM05D000166 ORTHO05D001532 1.4e-09 67.0 140 31.4
AUR62011195 Chenopodium quinoa HOM05D000041 ORTHO05D001532 1.9e-09 66.6 170 32.4
Gohir.D05G015100 Gossypium hirsutum HOM05D000041 ORTHO05D001532 1.9e-09 66.6 100 40.0
Nn2g12139 Nelumbo nucifera HOM05D000041 ORTHO05D001532 2.4e-09 66.2 118 36.4
Aa31LG8G12120 Aethionema arabicum HOM05D000041 ORTHO05D001532 4.1e-09 65.5 124 32.3
AUR62013293 Chenopodium quinoa HOM05D000041 ORTHO05D001532 1.6e-08 63.5 170 32.9
EL10Ac8g18750 Beta vulgaris HOM05D000041 ORTHO05D001532 3.5e-08 62.4 162 30.2
Os09g0123300 Oryza sativa ssp. japonica HOM05D000041 ORTHO05D001532 4.6e-08 62.0 102 31.4
C03p55670 Brassica napus HOM05D000041 ORTHO05D001532 5.1e-07 58.5 102 33.3
BcaB08g34518 Brassica carinata HOM05D000041 ORTHO05D001532 2.5e-06 56.2 102 31.4
COL.COLO4_15567 Corchorus olitorius HOM05D000041 ORTHO05D001532 3.3e-06 55.8 84 41.7
Zm00001eb025560 Zea mays HOM05D000166 ORTHO05D001532 3.3e-06 55.8 140 27.9
HPP92_021719 Vanilla planifolia HOM05D000041 ORTHO05D001532 4.3e-06 55.5 121 31.4


User provided reference genes

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