Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000584 Carpinus fangiana HOM05D004704 ORTHO05D005384 3.7e-307 1057.4 533 100.0
CiPaw.09G067800 Carya illinoinensis HOM05D004704 ORTHO05D005384 7.4e-239 830.5 549 78.0
Thecc.06G174000 Theobroma cacao HOM05D004704 ORTHO05D005384 2.0e-236 822.4 553 76.1
CiPaw.09G067900 Carya illinoinensis HOM05D004704 ORTHO05D005384 1.0e-235 820.1 545 78.5
Manes.17G053900 Manihot esculenta HOM05D004704 ORTHO05D005384 3.8e-235 818.1 552 76.4
COL.COLO4_31331 Corchorus olitorius HOM05D004704 ORTHO05D005384 1.4e-234 816.2 555 76.2
TWI38G0698 Tripterygium wilfordii HOM05D004704 ORTHO05D005384 3.9e-232 808.1 550 74.5
Potri.004G054500 Populus trichocarpa HOM05D004704 ORTHO05D005384 1.5e-231 806.2 549 75.4
Potri.011G064300 Populus trichocarpa HOM05D004704 ORTHO05D005384 7.0e-229 797.3 547 75.3
Sabra11G0046100 Salix brachista HOM05D004704 ORTHO05D005384 1.5e-228 796.2 548 75.5
PGR004G2343 Punica granatum HOM05D004704 ORTHO05D005384 4.5e-228 794.7 555 73.9
Gorai.010G156000 Gossypium raimondii HOM05D004704 ORTHO05D005384 7.7e-228 793.9 555 73.5
Sabra04G0035600 Salix brachista HOM05D004704 ORTHO05D005384 2.2e-227 792.3 548 73.9
Gohir.D06G134300 Gossypium hirsutum HOM05D004704 ORTHO05D005384 6.5e-227 790.8 555 73.5
PGR004G2271 Punica granatum HOM05D004704 ORTHO05D005384 7.2e-226 787.3 557 73.2
QL05p046090 Quercus lobata HOM05D004704 ORTHO05D005384 7.2e-226 787.3 546 73.6
Glyma.13G231200 Glycine max HOM05D004704 ORTHO05D005384 5.2e-224 781.2 551 73.1
QL05p045074 Quercus lobata HOM05D004704 ORTHO05D005384 5.7e-223 777.7 546 72.9
Cc02_g14600 Coffea canephora HOM05D004704 ORTHO05D005384 1.3e-222 776.5 553 72.9
Eucgr.D00532 Eucalyptus grandis HOM05D004704 ORTHO05D005384 2.4e-221 772.3 559 73.2
Nn1g04361 Nelumbo nucifera HOM05D004704 ORTHO05D005384 5.9e-220 767.7 552 71.2
MBI06_g18005_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 1.2e-215 753.4 558 69.2
TAR629G2327 Trochodendron aralioides HOM05D004704 ORTHO05D005384 9.7e-215 750.4 542 70.1
DCAR_028021 Daucus carota HOM05D004704 ORTHO05D005384 1.3e-214 750.0 545 71.4
TAR629G2609 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.7e-214 748.4 542 70.1
arahy.Tifrunner.gnm1.ann1.IMTX5S Arachis hypogaea HOM05D004704 ORTHO05D005384 4.8e-214 748.0 549 70.1
Aqoxy1G03204 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 2.7e-212 742.3 557 68.2
ClCG01G023620 Citrullus lanatus HOM05D004704 ORTHO05D005384 3.5e-212 741.9 543 70.9
TAR627G0020 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.5e-212 741.9 543 70.5
TAR706G0003 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.5e-212 741.9 543 70.5
Lsat_1_v5_gn_7_23201 Lactuca sativa HOM05D004704 ORTHO05D005384 4.5e-212 741.5 551 70.6
Nitab4.5_0002076g0080 Nicotiana tabacum HOM05D004704 ORTHO05D005384 4.5e-212 741.5 554 69.5
arahy.Tifrunner.gnm1.ann1.7UF87C Arachis hypogaea HOM05D004704 ORTHO05D005384 5.0e-211 738.0 548 68.6
SalBow8G1161 Salvia bowleyana HOM05D004704 ORTHO05D005384 5.0e-211 738.0 485 76.7
DCAR_004019 Daucus carota HOM05D004704 ORTHO05D005384 1.5e-210 736.5 554 69.5
HanXRQChr04g0115831 Helianthus annuus HOM05D004704 ORTHO05D005384 1.5e-210 736.5 553 70.2
CsaV3_6G050770 Cucumis sativus L. HOM05D004704 ORTHO05D005384 5.5e-210 734.6 548 69.7
Duzib192G0914 Durio zibethinus HOM05D004704 ORTHO05D005384 1.6e-209 733.0 554 69.1
DCAR_004020 Daucus carota HOM05D004704 ORTHO05D005384 8.8e-208 727.2 555 69.0
Migut.M01052 Erythranthe guttata HOM05D004704 ORTHO05D005384 8.8e-208 727.2 556 68.9
Eucgr.D00531 Eucalyptus grandis HOM05D004704 ORTHO05D005384 1.5e-207 726.5 553 68.5
Peaxi162Scf00200g00121 Petunia axillaris HOM05D004704 ORTHO05D005384 3.4e-207 725.3 559 66.9
ECA236G1293 Erigeron canadensis HOM05D004704 ORTHO05D005384 8.3e-206 720.7 548 68.6
MBI06_g18007_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 3.1e-205 718.8 554 68.1
Sed0013784 Sechium edule HOM05D004704 ORTHO05D005384 4.1e-205 718.4 536 69.2
MELO3C007223.2 Cucumis melo HOM05D004704 ORTHO05D005384 2.0e-204 716.1 544 67.8
A03p51400 Brassica napus HOM05D004704 ORTHO05D005384 2.7e-204 715.7 567 66.1
BcaC06g30574 Brassica carinata HOM05D004704 ORTHO05D005384 4.5e-204 714.9 567 65.8
BcaNung02719 Brassica carinata HOM05D004704 ORTHO05D005384 1.0e-203 713.8 567 65.8
C07p49820 Brassica napus HOM05D004704 ORTHO05D005384 1.3e-203 713.4 566 65.5
BolC7t45484H Brassica oleracea HOM05D004704 ORTHO05D005384 1.3e-203 713.4 566 65.5
PGSC0003DMG400018011 Solanum tuberosum HOM05D004704 ORTHO05D005384 1.7e-203 713.0 549 67.8
Dinv04632 Davidia involucrata HOM05D004704 ORTHO05D005384 2.9e-203 712.2 435 82.1
PSO063G2883 Papaver somniferum HOM05D004704 ORTHO05D005384 8.6e-203 710.7 568 65.7
PGSC0003DMG400004386 Solanum tuberosum HOM05D004704 ORTHO05D005384 8.6e-203 710.7 557 67.9
CARHR225390 Cardamine hirsuta HOM05D004704 ORTHO05D005384 1.5e-202 709.9 571 64.8
Thhalv10024794m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 3.3e-202 708.8 565 65.1
Solyc03g006230.1 Solanum lycopersicum HOM05D004704 ORTHO05D005384 4.2e-202 708.4 557 67.5
CSS0042475 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 1.2e-201 706.8 548 70.4
Sp7g15490 Schrenkiella parvula HOM05D004704 ORTHO05D005384 2.8e-201 705.7 576 64.1
Aa31LG6G1280 Aethionema arabicum HOM05D004704 ORTHO05D005384 4.7e-201 704.9 567 65.1
AL7G35740 Arabidopsis lyrata HOM05D004704 ORTHO05D005384 6.1e-201 704.5 570 64.6
Aqoxy4G00468 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 8.0e-201 704.1 536 67.9
Rhsim13G0106100 Rhododendron simsii HOM05D004704 ORTHO05D005384 1.8e-200 703.0 524 69.7
A01p10560 Brassica napus HOM05D004704 ORTHO05D005384 2.0e-199 699.5 545 66.4
BraA08t33364Z Brassica rapa HOM05D004704 ORTHO05D005384 7.5e-199 697.6 567 64.0
BcaNung03813 Brassica carinata HOM05D004704 ORTHO05D005384 6.3e-198 694.5 553 65.3
Manes.17G053800 Manihot esculenta HOM05D004704 ORTHO05D005384 1.1e-197 693.7 568 64.3
Nitab4.5_0001375g0020 Nicotiana tabacum HOM05D004704 ORTHO05D005384 1.1e-197 693.7 540 66.7
Rhsim13G0106000 Rhododendron simsii HOM05D004704 ORTHO05D005384 1.8e-197 693.0 585 62.2
A08p13850 Brassica napus HOM05D004704 ORTHO05D005384 4.1e-197 691.8 567 63.5
Carub.0007s2269 Capsella rubella HOM05D004704 ORTHO05D005384 4.1e-197 691.8 567 64.2
C01p12500 Brassica napus HOM05D004704 ORTHO05D005384 5.4e-197 691.4 545 65.7
BraA01t01002Z Brassica rapa HOM05D004704 ORTHO05D005384 5.4e-197 691.4 545 65.9
SGA_v2.0_scaffold1G00019 Striga asiatica HOM05D004704 ORTHO05D005384 1.6e-196 689.9 558 64.5
Thhalv10023013m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 2.0e-196 689.5 543 64.5
BolC1t01223H Brassica oleracea HOM05D004704 ORTHO05D005384 5.9e-196 688.0 549 64.5
CAN.G2115.3 Capsicum annuum HOM05D004704 ORTHO05D005384 5.0e-195 684.9 557 65.2
BcaC09g51493 Brassica carinata HOM05D004704 ORTHO05D005384 1.5e-194 683.3 542 64.4
BcaB04g18480 Brassica carinata HOM05D004704 ORTHO05D005384 1.9e-194 682.9 566 63.4
QL04p061454 Quercus lobata HOM05D004704 ORTHO05D005384 5.6e-194 681.4 550 68.9
ATR0602G038 Amborella trichopoda HOM05D004704 ORTHO05D005384 1.6e-193 679.9 547 64.2
BraA03t14222Z Brassica rapa HOM05D004704 ORTHO05D005384 6.1e-193 677.9 565 63.7
SGA_v2.0_scaffold1G00026 Striga asiatica HOM05D004704 ORTHO05D005384 6.8e-192 674.5 552 63.9
Lj3g0017096 Lotus japonicus HOM05D004704 ORTHO05D005384 9.8e-191 670.6 544 64.5
Phvul.005G096400 Phaseolus vulgaris HOM05D004704 ORTHO05D005384 1.7e-190 669.8 539 64.2
unitig_578.g16444 Utricularia gibba HOM05D004704 ORTHO05D005384 1.7e-190 669.8 554 64.3
VMungo1080G1587 Vigna mungo HOM05D004704 ORTHO05D005384 2.9e-190 669.1 539 64.4
Aqoxy4G00469 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 1.6e-188 663.3 461 71.1
BcaC09g51492 Brassica carinata HOM05D004704 ORTHO05D005384 2.7e-188 662.5 557 62.3
Glyma.13G291900 Glycine max HOM05D004704 ORTHO05D005384 6.0e-188 661.4 543 64.5
Glyma.12G209400 Glycine max HOM05D004704 ORTHO05D005384 7.8e-188 661.0 542 64.2
Lalb_Chr20g0121271 Lupinus albus HOM05D004704 ORTHO05D005384 8.6e-187 657.5 441 73.0
Medtr2g091155 Medicago truncatula HOM05D004704 ORTHO05D005384 8.6e-187 657.5 541 63.4
Lalb_Chr24g0400061 Lupinus albus HOM05D004704 ORTHO05D005384 7.3e-186 654.4 547 64.2
SGA_v2.0_scaffold1G00021 Striga asiatica HOM05D004704 ORTHO05D005384 1.2e-185 653.7 542 62.9
MBI06_g45390_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 3.6e-185 652.1 398 79.4
Lj1P1195T10 Lonicera japonica HOM05D004704 ORTHO05D005384 3.1e-184 649.0 432 76.6
BcaC01g00546 Brassica carinata HOM05D004704 ORTHO05D005384 4.0e-184 648.7 563 61.1
Psat5g275720 Pisum sativum HOM05D004704 ORTHO05D005384 1.3e-182 643.7 537 61.5
Oeu041801.1 Olea europaea HOM05D004704 ORTHO05D005384 2.2e-182 642.9 548 63.3
Oeu041796.1 Olea europaea HOM05D004704 ORTHO05D005384 3.7e-182 642.1 548 63.3
DCAR_013058 Daucus carota HOM05D004704 ORTHO05D005384 4.9e-182 641.7 539 63.1
Lalb_Chr14g0367381 Lupinus albus HOM05D004704 ORTHO05D005384 4.9e-182 641.7 544 62.7
Medtr2g091165 Medicago truncatula HOM05D004704 ORTHO05D005384 8.3e-182 641.0 532 62.0
Zm00001eb161990 Zea mays HOM05D004704 ORTHO05D005384 1.7e-179 633.3 564 59.0
PSO782G0987 Papaver somniferum HOM05D004704 ORTHO05D005384 1.5e-178 630.2 568 60.7
C03p81280 Brassica napus HOM05D004704 ORTHO05D005384 3.1e-176 622.5 527 62.0
CSS0042208 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 3.4e-175 619.0 551 63.9
Oeu062343.1 Olea europaea HOM05D004704 ORTHO05D005384 3.2e-173 612.5 550 60.5
PSO063G6793 Papaver somniferum HOM05D004704 ORTHO05D005384 1.1e-170 604.0 554 60.8
BcaNung03810 Brassica carinata HOM05D004704 ORTHO05D005384 6.2e-169 598.2 401 72.3
Os01g0613100 Oryza sativa ssp. japonica HOM05D004704 ORTHO05D005384 2.4e-168 596.3 580 56.2
TAR627G1005 Trochodendron aralioides HOM05D004704 ORTHO05D005384 2.2e-166 589.7 543 59.9
BolC3t20394H Brassica oleracea HOM05D004704 ORTHO05D005384 2.7e-164 582.8 384 72.7
Ca_01465_v3 Cicer arietinum L. HOM05D004704 ORTHO05D005384 5.1e-163 578.6 545 58.0
Sopen03g002240 Solanum pennellii HOM05D004704 ORTHO05D005384 1.5e-162 577.0 537 57.9
Oeu041804.1 Olea europaea HOM05D004704 ORTHO05D005384 2.8e-161 572.8 338 80.5
Oeu012062.1 Olea europaea HOM05D004704 ORTHO05D005384 1.1e-154 550.8 550 57.5
Rhsim13G0186500 Rhododendron simsii HOM05D004704 ORTHO05D005384 6.2e-153 545.0 516 58.3
TPR.G11553 Trifolium pratense HOM05D004704 ORTHO05D005384 2.0e-151 540.0 538 53.9
GSVIVG01021187001 Vitis vinifera HOM05D004704 ORTHO05D005384 2.0e-151 540.0 539 57.5
CDE02G3156 Ceratophyllum demersum HOM05D004704 ORTHO05D005384 4.2e-149 532.3 502 56.0
SalBow8G4518 Salvia bowleyana HOM05D004704 ORTHO05D005384 4.0e-144 515.8 301 81.7
AT4G18540 Arabidopsis thaliana HOM05D004704 ORTHO05D005384 1.4e-128 464.2 473 55.6
Pp3c12_12860 Physcomitrium patens HOM05D004704 ORTHO05D005384 1.2e-124 451.1 444 47.5
PSO782G0854 Papaver somniferum HOM05D004704 ORTHO05D005384 1.1e-104 384.8 385 57.7
Duzib235G1356 Durio zibethinus HOM05D004704 ORTHO05D005384 4.5e-103 379.4 330 66.1
GSVIVG01021186001 Vitis vinifera HOM05D004704 ORTHO05D000303 2.3e-99 367.1 493 46.9
Pp3c12_12910 Physcomitrium patens HOM05D004704 ORTHO05D005384 1.2e-98 364.8 376 45.2
Sabra11G0045900 Salix brachista HOM05D004704 ORTHO05D005384 2.5e-93 347.1 197 83.8
Solyc02g032600.1 Solanum lycopersicum HOM05D004704 ORTHO05D005384 5.4e-88 329.3 390 49.0
Rhsim13G0105800 Rhododendron simsii HOM05D004704 ORTHO05D005384 2.9e-86 323.6 358 51.4
TAR627G0576 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.8e-86 323.2 255 65.1
Aqoxy1G03203 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 1.4e-83 314.7 206 71.4
TAR627G1161 Trochodendron aralioides HOM05D004704 ORTHO05D005384 5.4e-72 276.2 155 82.6
SGA_v2.0_scaffold1G00016 Striga asiatica HOM05D004704 ORTHO05D005384 1.2e-60 238.4 207 58.0
Sabra11G0046000 Salix brachista HOM05D004704 ORTHO05D005384 1.4e-51 208.4 205 60.5
Lj1C1195T2 Lonicera japonica HOM05D004704 ORTHO05D005384 1.3e-49 201.8 263 51.3
SalBow2G1262 Salvia bowleyana HOM05D004704 ORTHO05D005384 2.4e-48 197.6 169 65.7
SEGI_01061 Sequoiadendron giganteum HOM05D004704 ORTHO05D005384 7.6e-42 176.0 288 40.3
SMO351G0588 Selaginella moellendorffii HOM05D020388 ORTHO05D005384 7.6e-34 149.4 434 27.2
arahy.Tifrunner.gnm1.ann1.EBKJ9L Arachis hypogaea HOM05D004704 ORTHO05D005384 2.4e-32 144.4 91 73.6
arahy.Tifrunner.gnm1.ann1.UG6603 Arachis hypogaea HOM05D004704 ORTHO05D005384 2.1e-31 141.4 91 72.5
COL.COLO4_31332 Corchorus olitorius HOM05D004704 ORTHO05D005384 3.5e-23 114.0 79 68.4
Rhsim06G0194600 Rhododendron simsii HOM05D000067 ORTHO05D005384 3.9e-22 110.5 115 51.3
Nitab4.5_0008860g0010 Nicotiana tabacum HOM05D004704 ORTHO05D005384 8.7e-22 109.4 152 44.7
arahy.Tifrunner.gnm1.ann1.E2ZA7R Arachis hypogaea HOM05D004704 ORTHO05D005384 1.9e-21 108.2 69 71.0
arahy.Tifrunner.gnm1.ann1.96JZXU Arachis hypogaea HOM05D004704 ORTHO05D005384 2.5e-21 107.8 76 67.1
arahy.Tifrunner.gnm1.ann1.V1RFD3 Arachis hypogaea HOM05D004704 ORTHO05D005384 5.7e-21 106.7 69 71.0
Cfa023998 Carpinus fangiana HOM05D004704 ORTHO05D005384 1.5e-18 98.6 180 31.7
Rhsim06G0194700 Rhododendron simsii HOM05D000067 ORTHO05D000097 6.7e-14 83.2 73 56.2
arahy.Tifrunner.gnm1.ann1.ESA3XA Arachis hypogaea HOM05D004704 ORTHO05D005384 2.5e-13 81.3 51 74.5
Nitab4.5_0008860g0020 Nicotiana tabacum HOM05D004704 ORTHO05D005384 6.3e-12 76.6 79 53.2
SEGI_17553 Sequoiadendron giganteum HOM05D004704 ORTHO05D005384 6.3e-12 76.6 170 32.9
SEGI_32787 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 6.5e-09 66.6 51 62.7


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