Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000552 Carpinus fangiana HOM05D000124 ORTHO05D000056 5.2e-44 180.6 90 100.0
Haze_06324 Corylus avellana HOM05D000124 ORTHO05D000056 7.3e-38 160.2 85 91.8
CiPaw.10G054600 Carya illinoinensis HOM05D000124 ORTHO05D000056 7.6e-19 97.1 99 60.6
CiPaw.09G066100 Carya illinoinensis HOM05D000124 ORTHO05D000056 3.0e-15 85.1 102 54.9
RcHm_v2.0_Chr5g0009741 Rosa chinensis HOM05D000124 ORTHO05D000056 6.6e-15 84.0 90 60.0
Prupe.4G055600 Prunus persica HOM05D000124 ORTHO05D000056 9.6e-14 80.1 89 57.3
QL05p043915 Quercus lobata HOM05D000124 ORTHO05D000056 1.2e-13 79.7 92 55.4
Duzib160G0225 Durio zibethinus HOM05D000124 ORTHO05D000056 6.2e-13 77.4 99 44.4
FAN12G2036 Fragaria x ananassa HOM05D000124 ORTHO05D000056 6.2e-13 77.4 90 57.8
FAN12G3507 Fragaria x ananassa HOM05D000124 ORTHO05D000056 6.2e-13 77.4 90 57.8
Potri.011G061800 Populus trichocarpa HOM05D000124 ORTHO05D000056 2.4e-12 75.5 100 42.0
TAR626G0774 Trochodendron aralioides HOM05D000124 ORTHO05D000056 2.4e-12 75.5 75 57.3
FvH4_4g10480 Fragaria vesca HOM05D000124 ORTHO05D000056 3.1e-12 75.1 90 56.7
Gorai.009G165400 Gossypium raimondii HOM05D000124 ORTHO05D000056 2.6e-11 72.0 90 50.0
Gohir.D05G160300 Gossypium hirsutum HOM05D000124 ORTHO05D000056 3.4e-11 71.6 90 48.9
Manes.17G051700 Manihot esculenta HOM05D000124 ORTHO05D000056 5.8e-11 70.9 100 47.0
Potri.004G051800 Populus trichocarpa HOM05D000124 ORTHO05D000056 7.6e-11 70.5 100 47.0
FAN07G2015 Fragaria x ananassa HOM05D000124 ORTHO05D000056 9.9e-11 70.1 90 56.7
MD10G1286200 Malus domestica HOM05D000124 ORTHO05D000056 1.3e-10 69.7 89 56.2
CSS0015392 Camellia sinensis var. sinensis HOM05D000124 ORTHO05D000056 1.7e-10 69.3 86 48.8
Duzib192G0631 Durio zibethinus HOM05D000124 ORTHO05D000056 1.7e-10 69.3 99 44.4
Gohir.A06G135200 Gossypium hirsutum HOM05D000124 ORTHO05D000056 4.9e-10 67.8 90 40.0
MD05G1306800 Malus domestica HOM05D000124 ORTHO05D000056 4.9e-10 67.8 91 54.9
Gohir.D06G134600 Gossypium hirsutum HOM05D000124 ORTHO05D000056 1.1e-09 66.6 90 38.9
Gorai.010G156500 Gossypium raimondii HOM05D000124 ORTHO05D000056 1.1e-09 66.6 90 38.9
Gohir.A05G157500 Gossypium hirsutum HOM05D000124 ORTHO05D000056 1.4e-09 66.2 90 47.8
Thecc.06G177600 Theobroma cacao HOM05D000124 ORTHO05D000056 3.2e-09 65.1 100 43.0
Sabra04G0032600 Salix brachista HOM05D000124 ORTHO05D000056 5.4e-09 64.3 99 44.4
Nn1g06350 Nelumbo nucifera HOM05D000124 ORTHO05D000056 7.1e-09 63.9 105 42.9
Aqoxy1G02227 Aquilegia oxysepala HOM05D000124 ORTHO05D000056 2.7e-08 62.0 67 53.7
Peaxi162Scf00042g00041 Petunia axillaris HOM05D000124 ORTHO05D000056 1.3e-07 59.7 66 51.5
Gohir.A10G029150 Gossypium hirsutum HOM05D000124 ORTHO05D000056 1.7e-07 59.3 87 40.2
Gohir.D10G029650 Gossypium hirsutum HOM05D000124 ORTHO05D000056 2.3e-07 58.9 87 40.2
TWI38G1050 Tripterygium wilfordii HOM05D000124 ORTHO05D000056 3.0e-07 58.5 98 40.8
Gorai.008G219300 Gossypium raimondii HOM05D000124 ORTHO05D000056 3.9e-07 58.2 87 40.2
CANSAT35G1970 Cannabis sativa HOM05D000124 ORTHO05D000056 5.1e-07 57.8 97 39.2
COL.COLO4_31389 Corchorus olitorius HOM05D000124 ORTHO05D000056 6.6e-07 57.4 60 53.3
Manes.16G034200 Manihot esculenta HOM05D000124 ORTHO05D000056 1.1e-06 56.6 90 43.3
Phvul.006G179700 Phaseolus vulgaris HOM05D000124 ORTHO05D000056 1.1e-06 56.6 88 42.0
Solyc02g077360.1 Solanum lycopersicum HOM05D000124 ORTHO05D000056 1.5e-06 56.2 67 50.7
Dinv40626 Davidia involucrata HOM05D000124 ORTHO05D000056 2.5e-06 55.5 87 44.8
PGSC0003DMG400010719 Solanum tuberosum HOM05D000124 ORTHO05D000056 2.5e-06 55.5 67 49.3
Sopen02g022260 Solanum pennellii HOM05D000124 ORTHO05D000056 4.3e-06 54.7 67 49.3
Glyma.13G233800 Glycine max HOM05D000124 ORTHO05D000056 5.6e-06 54.3 89 47.2
ClCG01G023450 Citrullus lanatus HOM05D000124 ORTHO05D000056 7.3e-06 53.9 98 38.8
Ciclev10018130m.g Citrus clementina HOM05D000124 ORTHO05D000056 7.3e-06 53.9 87 46.0
Sed0011732 Sechium edule HOM05D000124 ORTHO05D000056 9.6e-06 53.5 59 54.2


User provided reference genes

Program Settings