Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 1.7e-61 239.2 122 100.0
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 8.9e-55 216.9 124 91.9
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 5.4e-44 181.0 123 71.5
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 2.1e-40 169.1 129 72.9
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 1.1e-36 156.8 110 70.0
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.0e-34 150.2 109 64.2
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 5.6e-33 144.4 122 63.9
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 1.6e-32 142.9 126 61.9
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 2.8e-32 142.1 102 70.6
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 3.6e-32 141.7 109 61.5
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 4.7e-32 141.4 105 67.6
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 8.1e-32 140.6 97 69.1
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 1.1e-31 140.2 99 71.7
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 2.4e-31 139.0 100 68.0
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 4.0e-31 138.3 97 68.0
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 5.2e-31 137.9 87 74.7
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 6.8e-31 137.5 97 68.0
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 8.9e-31 137.1 102 65.7
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 1.2e-30 136.7 100 64.0
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 1.5e-30 136.3 94 72.3
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 2.6e-30 135.6 97 67.0
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 5.8e-30 134.4 93 67.7
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 9.9e-30 133.7 111 59.5
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.7e-29 132.9 100 67.0
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.7e-29 132.9 100 67.0
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 4.9e-29 131.3 114 60.5
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 4.9e-29 131.3 91 69.2
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 6.4e-29 131.0 83 71.1
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 1.1e-28 130.2 77 74.0
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 1.1e-28 130.2 90 68.9
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 1.4e-28 129.8 83 69.9
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 1.9e-28 129.4 100 62.0
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 1.9e-28 129.4 101 63.4
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 2.4e-28 129.0 113 62.8
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 3.2e-28 128.6 97 67.0
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 4.2e-28 128.3 110 59.1
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 9.3e-28 127.1 76 69.7
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 9.3e-28 127.1 103 58.3
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 1.2e-27 126.7 118 56.8
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 1.6e-27 126.3 100 63.0
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 1.6e-27 126.3 67 80.6
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 1.6e-27 126.3 94 62.8
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 1.6e-27 126.3 94 62.8
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 1.6e-27 126.3 94 62.8
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 2.1e-27 125.9 92 66.3
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 2.1e-27 125.9 80 72.5
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 2.7e-27 125.6 88 68.2
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 3.5e-27 125.2 101 60.4
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 4.6e-27 124.8 90 66.7
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 6.0e-27 124.4 96 62.5
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 6.0e-27 124.4 96 64.6
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 7.8e-27 124.0 101 60.4
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 7.8e-27 124.0 70 78.6
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 1.0e-26 123.6 90 65.6
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 1.0e-26 123.6 109 58.7
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 1.3e-26 123.2 79 69.6
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 1.3e-26 123.2 94 63.8
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.3e-26 123.2 116 54.3
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 1.3e-26 123.2 107 60.7
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 1.7e-26 122.9 93 64.5
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.7e-26 122.9 90 64.4
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 2.3e-26 122.5 105 58.1
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 3.0e-26 122.1 85 69.4
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 3.0e-26 122.1 77 74.0
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 3.0e-26 122.1 115 56.5
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 3.0e-26 122.1 82 69.5
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 3.0e-26 122.1 82 69.5
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 6.6e-26 120.9 107 57.9
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 8.7e-26 120.6 86 67.4
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 8.7e-26 120.6 86 66.3
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 8.7e-26 120.6 99 61.6
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 1.9e-25 119.4 105 60.0
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 1.9e-25 119.4 107 58.9
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.5e-25 119.0 117 57.3
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 4.3e-25 118.2 65 83.1
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 5.6e-25 117.9 116 56.0
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 7.3e-25 117.5 87 64.4
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 9.6e-25 117.1 89 66.3
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 9.6e-25 117.1 100 56.0
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 2.1e-24 115.9 99 55.6
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 2.8e-24 115.5 101 59.4
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 3.6e-24 115.2 93 61.3
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 3.6e-24 115.2 100 58.0
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 6.2e-24 114.4 102 56.9
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 8.1e-24 114.0 85 64.7
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 4.0e-23 111.7 102 54.9
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 4.0e-23 111.7 104 57.7
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 5.3e-23 111.3 83 65.1
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 5.3e-23 111.3 90 58.9
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 5.3e-23 111.3 59 76.3
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 1.5e-22 109.8 59 76.3
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 3.4e-22 108.6 125 48.8
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 5.8e-22 107.8 86 62.8
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 9.9e-22 107.1 61 73.8
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 1.3e-21 106.7 69 65.2
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 2.9e-21 105.5 96 54.2
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.9e-20 102.8 72 63.9
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 4.2e-20 101.7 51 82.4
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 9.3e-20 100.5 89 55.1
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 3.0e-18 95.5 108 47.2
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 3.3e-17 92.0 52 78.8
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 3.6e-16 88.6 77 53.2
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 2.6e-14 82.4 64 56.2


User provided reference genes

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