Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 0.0e+00 1208.7 615 100.0
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 4.5e-280 967.6 661 79.0
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 1.1e-273 946.4 620 77.6
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 7.2e-262 907.1 618 76.2
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 8.9e-228 793.9 609 66.0
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 3.5e-224 781.9 620 65.6
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 4.3e-222 775.0 591 67.0
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 3.7e-218 761.9 616 63.5
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 1.9e-217 759.6 590 65.8
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 7.8e-216 754.2 617 61.9
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 1.7e-215 753.1 627 64.6
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 5.6e-214 748.0 608 61.8
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 9.5e-214 747.3 627 61.6
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 1.4e-212 743.4 602 61.8
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 2.3e-212 742.7 628 62.3
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 3.1e-212 742.3 608 64.5
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 2.2e-210 736.1 608 61.0
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 4.9e-210 734.9 609 61.4
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 1.9e-209 733.0 603 63.7
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 4.1e-209 731.9 599 61.9
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 8.6e-207 724.2 616 60.2
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 1.4e-204 716.8 557 66.4
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 1.7e-202 709.9 605 61.0
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 4.9e-202 708.4 595 61.2
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 8.4e-202 707.6 618 59.5
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.1e-196 690.6 587 61.5
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 1.4e-196 690.3 589 60.3
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 3.4e-195 685.6 610 58.9
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 3.4e-195 685.6 595 60.3
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 3.8e-194 682.2 628 58.8
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 4.9e-194 681.8 593 61.2
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 6.4e-194 681.4 579 58.7
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 6.4e-194 681.4 612 59.0
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 6.0e-192 674.9 606 57.9
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 1.0e-191 674.1 608 58.2
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 4.3e-190 668.7 606 57.9
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 3.6e-189 665.6 624 58.0
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 6.2e-189 664.8 655 55.3
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 1.1e-188 664.1 597 58.8
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 6.9e-188 661.4 643 54.4
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 9.9e-187 657.5 587 60.1
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 1.6e-184 650.2 595 56.8
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 3.5e-184 649.0 619 56.2
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 3.9e-183 645.6 542 60.7
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 3.9e-183 645.6 599 55.4
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 5.1e-183 645.2 596 56.5
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 1.1e-182 644.0 593 55.8
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 1.5e-182 643.7 618 55.8
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 1.9e-182 643.3 571 57.3
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 1.9e-182 643.3 621 54.8
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 4.3e-182 642.1 604 55.1
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 5.6e-182 641.7 584 56.5
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 2.1e-181 639.8 588 57.7
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 2.8e-181 639.4 604 54.8
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 1.1e-180 637.5 604 55.1
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 1.8e-180 636.7 605 55.0
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 3.1e-180 636.0 569 56.6
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 1.3e-178 630.6 572 55.6
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 8.4e-178 627.9 607 54.0
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 5.5e-177 625.2 603 54.9
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 2.7e-176 622.9 451 68.3
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 1.8e-175 620.2 602 53.3
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 6.7e-175 618.2 598 54.3
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 4.8e-173 612.1 589 54.0
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 2.6e-171 606.3 603 53.9
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 7.6e-171 604.7 571 54.5
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 1.0e-170 604.4 572 55.6
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 2.5e-169 599.7 572 55.2
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 7.1e-169 598.2 567 54.7
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 1.2e-168 597.4 681 48.0
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 1.9e-166 590.1 597 52.1
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 8.2e-165 584.7 567 52.7
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 3.4e-163 579.3 717 46.3
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 7.9e-160 568.2 719 45.3
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 2.0e-155 553.5 421 63.9
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 5.0e-154 548.9 643 48.8
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.2e-152 544.3 421 63.4
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 2.2e-146 523.5 618 48.9
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 1.9e-145 520.4 594 47.6
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 7.2e-145 518.5 453 59.8
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 4.7e-144 515.8 444 59.9
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 2.3e-143 513.5 458 58.7
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 1.5e-142 510.8 419 64.7
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 1.3e-141 507.7 614 45.1
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 1.0e-138 498.0 588 46.8
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 2.6e-134 483.4 590 47.5
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 1.7e-133 480.7 437 58.1
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 1.8e-132 477.2 593 48.4
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 8.5e-130 468.4 569 45.0
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 1.0e-127 461.5 409 58.7
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 9.8e-126 454.9 405 59.0
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 2.3e-122 443.7 493 46.0
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 1.6e-120 437.6 599 44.1
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 2.8e-120 436.8 422 54.0
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 1.0e-119 434.9 370 59.2
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 1.8e-119 434.1 488 52.5
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 8.9e-119 431.8 434 53.2
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 3.8e-114 416.4 584 41.8
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 1.2e-102 378.3 579 40.6
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.5e-102 377.9 635 38.6
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 1.8e-95 354.4 577 38.8
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 1.9e-76 291.2 292 51.4
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 4.5e-62 243.4 233 51.5
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 5.8e-62 243.0 584 29.1
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 1.1e-52 212.2 213 54.9
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 9.7e-49 199.1 266 46.6
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 1.2e-46 192.2 627 27.4
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 2.0e-46 191.4 196 53.1
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 2.0e-38 164.9 260 38.5
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 2.0e-30 138.3 211 34.6
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 1.7e-29 135.2 156 46.2
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 1.1e-28 132.5 309 33.0
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 1.3e-21 109.0 143 51.0
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 1.2e-17 95.9 63 76.2
CAN.G638.7 Capsicum annuum HOM05D006452 ORTHO05D008068 5.3e-15 87.0 170 38.8
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 2.0e-14 85.1 372 26.6
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 2.9e-13 81.3 93 51.6
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.5e-12 79.0 156 39.1
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 7.2e-12 76.6 67 62.7
MBI05_g22668_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 8.8e-10 69.7 63 57.1
MBI05_g40582_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D029689 8.8e-10 69.7 70 52.9
MBI05_g44052_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 8.8e-10 69.7 70 52.9
FvH4_3g08350 Fragaria vesca HOM05D003433 ORTHO05D003921 1.5e-09 68.9 49 65.3


User provided reference genes

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