Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000528 Carpinus fangiana HOM05D007286 ORTHO05D008955 2.6e-184 648.7 342 100.0
Cfa010442 Carpinus fangiana HOM05D007286 ORTHO05D008955 9.9e-120 434.1 253 94.5
Haze_03401 Corylus avellana HOM05D007286 ORTHO05D008955 5.1e-116 421.8 253 92.1
CiPaw.13G047300 Carya illinoinensis HOM05D007286 ORTHO05D008955 2.0e-51 207.2 275 53.1
QL04p050581 Quercus lobata HOM05D007286 ORTHO05D008955 7.8e-48 195.3 282 51.1
MD02G1265200 Malus domestica HOM05D007286 ORTHO05D008955 4.7e-37 159.5 275 46.9
FAN06G0358 Fragaria x ananassa HOM05D007286 ORTHO05D008955 1.9e-33 147.5 306 43.5
FAN10G3167 Fragaria x ananassa HOM05D007286 ORTHO05D008955 9.2e-33 145.2 306 43.1
Ciclev10000662m.g Citrus clementina HOM05D007286 ORTHO05D008955 2.1e-32 144.1 293 45.4
FAN03G1022 Fragaria x ananassa HOM05D007286 ORTHO05D008955 2.1e-32 144.1 306 43.1
FvH4_7g04960 Fragaria vesca HOM05D007286 ORTHO05D008955 2.7e-32 143.7 306 43.1
RcHm_v2.0_Chr1g0331161 Rosa chinensis HOM05D007286 ORTHO05D008955 2.7e-32 143.7 317 41.6
Prupe.2G060300 Prunus persica HOM05D007286 ORTHO05D008955 6.0e-32 142.5 300 44.0
GSVIVG01027344001 Vitis vinifera HOM05D007286 ORTHO05D008955 5.1e-31 139.4 253 45.1
Nn7g37274 Nelumbo nucifera HOM05D007286 ORTHO05D008955 1.2e-29 134.8 295 41.4
Hma1.2p1_0233F.1_g097980 Hydrangea macrophylla HOM05D007286 ORTHO05D008955 2.1e-29 134.0 287 40.8
CANSAT56G1680 Cannabis sativa HOM05D007286 ORTHO05D008955 1.4e-28 131.3 249 45.8
CANSAT56G4194 Cannabis sativa HOM05D007286 ORTHO05D008955 1.8e-28 131.0 249 46.6
CSS0007228 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.3e-28 130.6 273 44.0
CSS0046865 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D008955 2.3e-28 130.6 273 44.0
TAR555G0002 Trochodendron aralioides HOM05D007286 ORTHO05D008955 5.2e-28 129.4 296 39.9
Lalb_Chr19g0132561 Lupinus albus HOM05D007286 ORTHO05D008955 8.9e-28 128.6 274 45.3
Rhsim07G0072400 Rhododendron simsii HOM05D007286 ORTHO05D008955 1.7e-26 124.4 267 40.8
TWI38G1128 Tripterygium wilfordii HOM05D007286 ORTHO05D008955 1.7e-26 124.4 278 43.2
FvH4_7g05350 Fragaria vesca HOM05D007286 ORTHO05D008955 2.9e-26 123.6 247 43.3
Glyma.08G227900 Glycine max HOM05D007286 ORTHO05D008955 2.9e-26 123.6 276 44.9
Glyma.15G221400 Glycine max HOM05D007286 ORTHO05D008955 1.4e-25 121.3 276 44.9
FAN03G2081 Fragaria x ananassa HOM05D007286 ORTHO05D008955 4.1e-25 119.8 247 42.5
VMungo1127G0495 Vigna mungo HOM05D007286 ORTHO05D008955 1.6e-24 117.9 269 42.4
arahy.Tifrunner.gnm1.ann1.VD1ICN Arachis hypogaea HOM05D007286 ORTHO05D008955 2.1e-24 117.5 312 40.1
FAN01G1792 Fragaria x ananassa HOM05D007286 ORTHO05D008955 2.1e-24 117.5 247 42.1
FAN10G0279 Fragaria x ananassa HOM05D000139 ORTHO05D008955 6.0e-24 115.9 306 38.6
arahy.Tifrunner.gnm1.ann1.5NH7JH Arachis hypogaea HOM05D007286 ORTHO05D008955 1.1e-22 111.7 312 38.5
Potri.010G247100 Populus trichocarpa HOM05D007286 ORTHO05D008955 1.5e-22 111.3 290 40.3
Sabra10G0192500 Salix brachista HOM05D007286 ORTHO05D008955 4.3e-22 109.8 289 38.8
ClCG05G022150 Citrullus lanatus HOM05D007286 ORTHO05D008955 1.2e-21 108.2 303 37.3
vmacro23447 Vaccinium macrocarpon HOM05D007286 ORTHO05D008955 1.6e-21 107.8 264 39.0
Psat4g141960 Pisum sativum HOM05D007286 ORTHO05D008955 2.1e-21 107.5 245 43.7
Lj3g0009162 Lotus japonicus HOM05D007286 ORTHO05D008955 3.6e-21 106.7 244 42.6
vmacro13789 Vaccinium macrocarpon HOM05D007286 ORTHO05D008955 4.7e-21 106.3 264 38.6
Aqoxy1G00088 Aquilegia oxysepala HOM05D007286 ORTHO05D008955 1.4e-20 104.8 262 37.0
Nitab4.5_0005056g0090 Nicotiana tabacum HOM05D007286 ORTHO05D008955 1.4e-20 104.8 258 39.9
CsaV3_5G034980 Cucumis sativus L. HOM05D007286 ORTHO05D008955 1.8e-20 104.4 300 34.3
Actinidia12136 Actinidia chinensis HOM05D007286 ORTHO05D008955 2.4e-20 104.0 247 41.3
Potri.008G012000 Populus trichocarpa HOM05D007286 ORTHO05D008955 2.4e-20 104.0 289 38.8
PGR142G0126 Punica granatum HOM05D007286 ORTHO05D008955 3.1e-20 103.6 263 38.0
Sabra08G0007300 Salix brachista HOM05D007286 ORTHO05D008955 6.8e-20 102.4 266 39.5
PSO339G4644 Papaver somniferum HOM05D007286 ORTHO05D008955 8.9e-20 102.1 286 36.4
Sed0010854 Sechium edule HOM05D007286 ORTHO05D008955 8.9e-20 102.1 279 36.2
PGSC0003DMG401027501 Solanum tuberosum HOM05D007286 ORTHO05D008955 8.9e-20 102.1 258 39.5
Nitab4.5_0001611g0060 Nicotiana tabacum HOM05D007286 ORTHO05D008955 1.2e-19 101.7 259 38.6
MBI19_g06405_MAGBIO Magnolia biondii HOM05D007286 ORTHO05D008955 2.0e-19 100.9 288 36.8
Phvul.011G187500 Phaseolus vulgaris HOM05D007286 ORTHO05D008955 2.0e-19 100.9 268 39.2
Lsat_1_v5_gn_5_41960 Lactuca sativa HOM05D007286 ORTHO05D008955 2.6e-19 100.5 287 35.2
Medtr8g044120 Medicago truncatula HOM05D007286 ORTHO05D008955 7.6e-19 99.0 238 42.0
Dinv30991 Davidia involucrata HOM05D007286 ORTHO05D008955 1.7e-18 97.8 247 39.3
Dinv31112 Davidia involucrata HOM05D007286 ORTHO05D008955 1.7e-18 97.8 247 39.3
MELO3C012308.2 Cucumis melo HOM05D007286 ORTHO05D008955 2.9e-18 97.1 301 34.6
COL.COLO4_28923 Corchorus olitorius HOM05D007286 ORTHO05D008955 3.8e-18 96.7 301 35.9
ECA246G2791 Erigeron canadensis HOM05D000076 ORTHO05D002730 3.8e-18 96.7 263 39.2
HanXRQChr07g0192711 Helianthus annuus HOM05D007286 ORTHO05D008955 3.8e-18 96.7 253 38.7
AUR62041274 Chenopodium quinoa HOM05D007286 ORTHO05D008955 6.4e-18 95.9 312 35.3
Cc07_g21330 Coffea canephora HOM05D007286 ORTHO05D008955 6.4e-18 95.9 281 37.4
Sopen01g040600 Solanum pennellii HOM05D007286 ORTHO05D008955 8.4e-18 95.5 258 39.1
Peaxi162Scf00647g00320 Petunia axillaris HOM05D007286 ORTHO05D008955 1.4e-17 94.7 258 38.0
Solyc01g096890.4 Solanum lycopersicum HOM05D007286 ORTHO05D008955 1.4e-17 94.7 258 39.5
Eucgr.G02637 Eucalyptus grandis HOM05D007286 ORTHO05D008955 3.2e-17 93.6 262 38.5
Duzib128G1558 Durio zibethinus HOM05D000138 ORTHO05D008955 4.2e-17 93.2 255 39.2
Atru.chr12.1143 Acer truncatum HOM05D007286 ORTHO05D008955 1.2e-16 91.7 229 39.3
CAN.G134.51 Capsicum annuum HOM05D007286 ORTHO05D008955 1.3e-15 88.2 259 37.8
Manes.10G063001 Manihot esculenta HOM05D000188 ORTHO05D000362 1.3e-15 88.2 285 37.5
AUR62034104 Chenopodium quinoa HOM05D007286 ORTHO05D008955 1.7e-15 87.8 311 33.4
Gohir.A05G285500 Gossypium hirsutum HOM05D007286 ORTHO05D008955 6.6e-15 85.9 303 36.0
Gohir.D05G286600 Gossypium hirsutum HOM05D007286 ORTHO05D008955 1.1e-14 85.1 303 36.0
Dinv20486 Davidia involucrata HOM05D007286 ORTHO05D008955 5.6e-14 82.8 72 61.1
Gorai.009G301600 Gossypium raimondii HOM05D007286 ORTHO05D008955 5.6e-14 82.8 303 35.3
Ca_12172_v3 Cicer arietinum L. HOM05D007286 ORTHO05D008955 9.6e-14 82.0 263 38.4
Hund06829 Selenicereus undatus HOM05D007286 ORTHO05D008955 8.1e-13 79.0 300 32.7
Thecc.10G130100 Theobroma cacao HOM05D007286 ORTHO05D008955 8.1e-13 79.0 294 33.7
Sc09g0004920 Simmondsia chinensis HOM05D007286 ORTHO05D008955 5.3e-12 76.3 269 34.2
EL10Ac4g08793 Beta vulgaris HOM05D007286 ORTHO05D008955 2.0e-11 74.3 267 32.2
DCAR_025313 Daucus carota HOM05D007286 ORTHO05D008955 5.8e-11 72.8 315 34.0
ATR0307G001 Amborella trichopoda HOM05D007286 ORTHO05D008955 7.6e-11 72.4 309 33.0
TPR.G36317 Trifolium pratense HOM05D007286 ORTHO05D008955 3.8e-10 70.1 88 55.7
Aqoxy386s001 Aquilegia oxysepala HOM05D007286 ORTHO05D008955 1.1e-06 58.5 241 32.8
CDE04G1177 Ceratophyllum demersum HOM05D007286 ORTHO05D008955 4.3e-06 56.6 299 31.4


User provided reference genes

Program Settings