Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000511 Carpinus fangiana HOM05D008668 ORTHO05D010653 3.3e-89 331.6 163 100.0
Haze_06401 Corylus avellana HOM05D008668 ORTHO05D010653 2.5e-73 278.9 163 87.1
QL05p041791 Quercus lobata HOM05D008668 ORTHO05D010653 7.0e-31 137.9 185 47.0
Thecc.06G183300 Theobroma cacao HOM05D008668 ORTHO05D010653 1.8e-26 123.2 188 43.1
Prupe.4G050900 Prunus persica HOM05D008668 ORTHO05D010653 9.8e-25 117.5 188 43.6
COL.COLO4_31435 Corchorus olitorius HOM05D008668 ORTHO05D010653 1.8e-23 113.2 176 43.8
Dinv17338 Davidia involucrata HOM05D008668 ORTHO05D010653 2.9e-21 105.9 184 43.5
Eucgr.E03256 Eucalyptus grandis HOM05D008668 ORTHO05D010653 2.5e-20 102.8 172 41.3
Gohir.D10G027650 Gossypium hirsutum HOM05D008668 ORTHO05D010653 2.5e-20 102.8 163 44.2
Gorai.011G029500 Gossypium raimondii HOM05D008668 ORTHO05D010653 3.3e-20 102.4 163 44.2
Gohir.A10G027250 Gossypium hirsutum HOM05D008668 ORTHO05D010653 7.3e-20 101.3 169 43.8
Cpa.g.sc373.2 Carica papaya HOM05D008668 ORTHO05D010653 9.5e-20 100.9 176 40.3
Glyma.13G236900 Glycine max HOM05D008668 ORTHO05D010653 5.2e-18 95.1 187 39.6
Dinv40588 Davidia involucrata HOM05D008668 ORTHO05D010653 8.9e-18 94.4 179 39.7
Ciclev10017813m.g Citrus clementina HOM05D008668 ORTHO05D010653 1.5e-17 93.6 173 39.9
Manes.17G048000 Manihot esculenta HOM05D008668 ORTHO05D010653 5.8e-17 91.7 172 35.5
Lj6g0024090 Lotus japonicus HOM05D008668 ORTHO05D010653 1.3e-16 90.5 193 35.2
FAN21G3728 Fragaria x ananassa HOM05D008668 ORTHO05D010653 2.9e-16 89.4 177 37.9
FAN25G1913 Fragaria x ananassa HOM05D008668 ORTHO05D010653 6.4e-16 88.2 177 37.3
FvH4_3g08820 Fragaria vesca HOM05D008668 ORTHO05D010653 1.1e-15 87.4 167 38.9
FAN11G1694 Fragaria x ananassa HOM05D008668 ORTHO05D010653 1.1e-15 87.4 167 38.9
CSS0028958 Camellia sinensis var. sinensis HOM05D008668 ORTHO05D010653 4.1e-15 85.5 173 38.7
CSS0023827 Camellia sinensis var. sinensis HOM05D008668 ORTHO05D010653 2.0e-14 83.2 173 38.2
Glyma.15G076600 Glycine max HOM05D008668 ORTHO05D010653 2.7e-14 82.8 169 37.9
FAN16G1191 Fragaria x ananassa HOM05D008668 ORTHO05D010653 3.5e-14 82.4 177 35.6
Ca_00351_v3 Cicer arietinum L. HOM05D008668 ORTHO05D010653 6.0e-14 81.6 191 32.5
Psat0s1495g0120 Pisum sativum HOM05D008668 ORTHO05D010653 8.6e-13 77.8 169 34.3
TPR.G16527 Trifolium pratense HOM05D008668 ORTHO05D010653 5.6e-12 75.1 192 33.3
Psat1g203600 Pisum sativum HOM05D008668 ORTHO05D010653 1.6e-11 73.6 191 33.0
Medtr2g014250 Medicago truncatula HOM05D008668 ORTHO05D010653 2.1e-11 73.2 194 34.0
Medtr4g088510 Medicago truncatula HOM05D008668 ORTHO05D010653 2.1e-11 73.2 178 33.1
Ca_18577_v3 Cicer arietinum L. HOM05D008668 ORTHO05D010653 1.8e-10 70.1 165 33.9
TPR.G16328 Trifolium pratense HOM05D008668 ORTHO05D010653 1.8e-10 70.1 180 33.3
Lalb_Chr16g0383941 Lupinus albus HOM05D008668 ORTHO05D010653 2.0e-09 66.6 190 30.5
Potri.011G056500 Populus trichocarpa HOM05D008668 ORTHO05D010653 2.0e-09 66.6 183 32.8
Glyma.13G177100 Glycine max HOM05D008668 ORTHO05D010653 5.8e-09 65.1 156 34.0
Lj4g0022764 Lotus japonicus HOM05D008668 ORTHO05D010653 8.3e-08 61.2 191 31.9
Sopen02g022720 Solanum pennellii HOM05D018325 ORTHO05D010653 2.4e-07 59.7 146 35.6
PGSC0003DMG400029711 Solanum tuberosum HOM05D018325 ORTHO05D010653 3.2e-07 59.3 141 32.6
ECA248G1054 Erigeron canadensis HOM05D008668 ORTHO05D010653 5.4e-07 58.5 151 35.1
VMungo0251G3566 Vigna mungo HOM05D008668 ORTHO05D010653 5.4e-07 58.5 156 29.5
DCAR_003388 Daucus carota HOM05D008668 ORTHO05D010653 9.2e-07 57.8 161 33.5


User provided reference genes

Program Settings