Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000439 Carpinus fangiana HOM05D007781 ORTHO05D009769 2.9e-37 157.9 73 100.0
Lj1A1206T64 Lonicera japonica HOM05D021202 ORTHO05D009769 3.4e-17 91.3 58 65.5
Ca_18542_v3 Cicer arietinum L. HOM05D021202 ORTHO05D009769 2.8e-16 88.2 56 66.1
Haze_06475 Corylus avellana HOM05D007781 ORTHO05D009769 1.8e-15 85.5 97 45.4
Zm00001eb161950 Zea mays HOM05D021202 ORTHO05D009769 9.5e-12 73.2 67 50.7
MD05G1313200 Malus domestica HOM05D007781 ORTHO05D009769 2.8e-11 71.6 97 40.2
MD10G1295400 Malus domestica HOM05D007781 ORTHO05D009769 2.8e-11 71.6 97 40.2
Prupe.4G046600 Prunus persica HOM05D007781 ORTHO05D009769 1.0e-10 69.7 97 40.2
Ciclev10017149m.g Citrus clementina HOM05D007781 ORTHO05D009769 2.3e-10 68.6 97 40.2
Rhsim13G0177700 Rhododendron simsii HOM05D021202 ORTHO05D009769 2.3e-10 68.6 47 66.0
RcHm_v2.0_Chr5g0008291 Rosa chinensis HOM05D007781 ORTHO05D009769 1.2e-09 66.2 97 38.1
TAR627G0113 Trochodendron aralioides HOM05D007781 ORTHO05D009769 1.2e-09 66.2 97 39.2
Thecc.06G188400 Theobroma cacao HOM05D007781 ORTHO05D009769 1.5e-09 65.9 97 40.2
Manes.16G027000 Manihot esculenta HOM05D007781 ORTHO05D009769 2.0e-09 65.5 97 37.1
CiPaw.09G059400 Carya illinoinensis HOM05D007781 ORTHO05D009769 2.6e-09 65.1 97 39.2
Dinv40553 Davidia involucrata HOM05D007781 ORTHO05D009769 2.6e-09 65.1 97 39.2
Duzib235G1462 Durio zibethinus HOM05D007781 ORTHO05D009769 2.6e-09 65.1 97 40.2
FvH4_3g09310 Fragaria vesca HOM05D007781 ORTHO05D009769 2.6e-09 65.1 97 38.1
FAN11G2776 Fragaria x ananassa HOM05D007781 ORTHO05D009769 2.6e-09 65.1 97 38.1
FAN21G0375 Fragaria x ananassa HOM05D007781 ORTHO05D009769 2.6e-09 65.1 97 38.1
FAN16G0963 Fragaria x ananassa HOM05D007781 ORTHO05D009769 4.4e-09 64.3 97 38.1
Actinidia05631 Actinidia chinensis HOM05D007781 ORTHO05D009769 7.5e-09 63.5 95 38.9
COL.COLO4_31480 Corchorus olitorius HOM05D007781 ORTHO05D009769 7.5e-09 63.5 91 39.6
Gorai.009G169900 Gossypium raimondii HOM05D007781 ORTHO05D009769 7.5e-09 63.5 97 39.2
Lj4g0009430 Lotus japonicus HOM05D007781 ORTHO05D009769 1.3e-08 62.8 90 38.9
Gohir.A05G161900 Gossypium hirsutum HOM05D007781 ORTHO05D009769 1.7e-08 62.4 97 38.1
Gohir.D05G164700 Gossypium hirsutum HOM05D007781 ORTHO05D009769 1.7e-08 62.4 97 38.1
CANSAT35G1759 Cannabis sativa HOM05D007781 ORTHO05D009769 2.2e-08 62.0 93 37.6
CDE10G1000 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 2.2e-08 62.0 106 35.8
Nn1g06568 Nelumbo nucifera HOM05D007781 ORTHO05D009769 2.2e-08 62.0 94 37.2
Nitab4.5_0007940g0030 Nicotiana tabacum HOM05D007781 ORTHO05D009769 4.9e-08 60.8 97 38.1
Nitab4.5_0003432g0040 Nicotiana tabacum HOM05D007781 ORTHO05D009769 1.1e-07 59.7 97 37.1
Phvul.002G234100 Phaseolus vulgaris HOM05D007781 ORTHO05D009769 1.4e-07 59.3 90 37.8
Sed0016416 Sechium edule HOM05D007781 ORTHO05D009769 1.4e-07 59.3 93 36.6
Oeu053970.1 Olea europaea HOM05D007781 ORTHO05D009769 1.9e-07 58.9 93 36.6
Hma1.2p1_0126F.1_g059410 Hydrangea macrophylla HOM05D007781 ORTHO05D009769 2.4e-07 58.5 107 32.7
PGSC0003DMG400029720 Solanum tuberosum HOM05D007781 ORTHO05D009769 2.4e-07 58.5 97 37.1
Cc02_g13310 Coffea canephora HOM05D007781 ORTHO05D009769 4.1e-07 57.8 97 37.1
Glyma.07G196200 Glycine max HOM05D007781 ORTHO05D009769 4.1e-07 57.8 87 37.9
ClCG03G006020 Citrullus lanatus HOM05D007781 ORTHO05D009769 5.4e-07 57.4 93 35.5
TPR.G625 Trifolium pratense HOM05D002138 ORTHO05D002106 5.4e-07 57.4 42 50.0
MELO3C002600.2 Cucumis melo HOM05D007781 ORTHO05D009769 7.0e-07 57.0 93 35.5
VMungo0251G3178 Vigna mungo HOM05D007781 ORTHO05D009769 7.0e-07 57.0 90 35.6
Potri.004G043100 Populus trichocarpa HOM05D007781 ORTHO05D009769 9.2e-07 56.6 97 36.1
PGR042G1810 Punica granatum HOM05D007781 ORTHO05D009769 9.2e-07 56.6 92 35.9
ClCG09G012100 Citrullus lanatus HOM05D002138 ORTHO05D002106 1.2e-06 56.2 36 58.3
DCAR_005621 Daucus carota HOM05D002138 ORTHO05D002106 1.2e-06 56.2 35 60.0
CAN.G1164.27 Capsicum annuum HOM05D007781 ORTHO05D009769 2.0e-06 55.5 92 37.0
CsaV3_1G012280 Cucumis sativus L. HOM05D007781 ORTHO05D009769 2.0e-06 55.5 93 34.4
Sopen02g023130 Solanum pennellii HOM05D007781 ORTHO05D009769 2.0e-06 55.5 97 36.1
TPR.G12128 Trifolium pratense HOM05D007781 ORTHO05D009769 2.0e-06 55.5 87 36.8
Sabra04G0026700 Salix brachista HOM05D007781 ORTHO05D009769 2.7e-06 55.1 97 36.1
MSTRG.14698 Avicennia marina HOM05D007781 ORTHO05D009769 3.5e-06 54.7 93 35.5
Sabra01G0112300 Salix brachista HOM05D002138 ORTHO05D002106 3.5e-06 54.7 35 60.0
Psat7g113680 Pisum sativum HOM05D007781 ORTHO05D009769 4.6e-06 54.3 87 35.6
THA.LOC104812795 Tarenaya hassleriana HOM05D007781 ORTHO05D009769 4.6e-06 54.3 87 35.6
BolC7t45586H Brassica oleracea HOM05D002138 ORTHO05D002106 7.8e-06 53.5 43 51.2
Nitab4.5_0016624g0010 Nicotiana tabacum HOM05D002138 ORTHO05D002106 7.8e-06 53.5 39 48.7
Hund21227 Selenicereus undatus HOM05D007781 ORTHO05D009769 7.8e-06 53.5 95 35.8
Solyc02g078270.3 Solanum lycopersicum HOM05D007781 ORTHO05D009769 7.8e-06 53.5 97 35.1


User provided reference genes

Program Settings