Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 2.2e-155 552.4 299 100.0
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 3.0e-128 462.2 284 90.8
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 1.1e-127 460.3 284 90.5
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.7e-83 313.5 301 59.8
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 1.8e-64 250.4 284 51.1
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 7.5e-63 245.0 295 54.2
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.0e-60 236.9 281 52.0
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 2.7e-60 236.5 269 51.3
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 2.9e-59 233.0 281 50.5
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 1.2e-57 227.6 279 54.8
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.2e-57 227.6 279 54.8
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 2.1e-57 226.9 268 52.2
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 5.2e-56 222.2 285 48.8
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 7.5e-55 218.4 264 51.9
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.3e-54 217.6 275 49.8
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 2.8e-54 216.5 285 47.4
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 2.8e-54 216.5 253 53.4
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 8.3e-54 214.9 274 49.3
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 7.0e-53 211.8 285 48.1
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 1.2e-52 211.1 255 48.6
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 1.6e-52 210.7 285 47.0
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 2.7e-52 209.9 270 48.1
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 2.7e-52 209.9 270 48.1
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 2.3e-51 206.8 305 44.3
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 2.3e-51 206.8 271 47.6
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 8.6e-51 204.9 253 49.0
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 5.5e-50 202.2 269 46.8
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 1.2e-49 201.1 276 46.4
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 8.9e-48 194.9 266 49.2
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 2.6e-47 193.4 285 45.6
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 3.4e-47 193.0 286 49.0
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.2e-46 190.3 273 48.0
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 2.8e-46 189.9 287 46.0
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 2.8e-46 189.9 278 46.0
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 2.4e-45 186.8 268 47.0
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 1.6e-44 184.1 285 43.9
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 2.0e-44 183.7 262 48.1
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 1.0e-43 181.4 264 47.0
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 6.6e-43 178.7 226 49.6
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 8.6e-43 178.3 259 49.4
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 2.5e-42 176.8 243 46.1
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 3.3e-42 176.4 275 45.5
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.6e-41 174.1 268 47.0
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 2.8e-41 173.3 275 44.4
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 4.7e-41 172.6 262 49.6
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 6.1e-41 172.2 257 48.2
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 1.0e-40 171.4 281 43.4
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 1.2e-39 167.9 262 44.3
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 7.5e-39 165.2 265 44.2
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 9.8e-39 164.9 264 43.2
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.3e-38 164.5 284 44.7
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.3e-38 164.5 265 43.8
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 3.7e-38 162.9 265 43.8
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 3.7e-38 162.9 268 42.9
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 4.9e-38 162.5 265 42.6
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 2.4e-37 160.2 249 44.2
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 1.2e-36 157.9 264 42.0
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 1.2e-36 157.9 258 43.8
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 2.7e-36 156.8 258 41.9
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.3e-35 153.7 163 54.0
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 3.9e-35 152.9 151 56.3
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 8.6e-35 151.8 252 44.8
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 1.9e-34 150.6 271 43.5
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 1.9e-34 150.6 268 42.9
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 4.3e-34 149.4 279 39.4
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.2e-33 147.9 230 43.0
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 1.6e-33 147.5 256 46.9
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 3.6e-33 146.4 280 38.2
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 1.1e-32 144.8 267 40.1
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.4e-32 144.4 270 41.9
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 6.8e-32 142.1 264 45.8
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 5.8e-31 139.0 257 42.0
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 5.8e-31 139.0 278 36.7
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 7.5e-31 138.7 294 37.4
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 4.9e-30 136.0 268 38.8
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 6.4e-30 135.6 266 38.7
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 3.2e-29 133.3 266 39.1
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 1.2e-28 131.3 258 40.7
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 2.1e-28 130.6 280 38.2
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 2.1e-28 130.6 332 34.0
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 6.0e-28 129.0 262 38.5
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 7.8e-28 128.6 288 37.8
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 5.1e-27 125.9 285 37.9
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 6.6e-27 125.6 136 55.9
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 4.3e-26 122.9 261 37.2
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 1.2e-25 121.3 262 38.2
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 2.8e-25 120.2 271 36.9
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 2.8e-25 120.2 247 36.0
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 4.7e-25 119.4 265 36.2
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 8.1e-25 118.6 274 36.5
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 5.2e-24 115.9 252 38.5
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 6.8e-24 115.5 257 39.3
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 3.4e-23 113.2 259 35.9
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.8e-23 112.5 250 38.4
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 1.3e-22 111.3 273 35.5
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.7e-22 110.9 248 38.7
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.7e-22 110.9 154 44.8
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 2.2e-22 110.5 270 38.1
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 3.7e-22 109.8 259 35.5
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 3.7e-22 109.8 267 36.3
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 6.4e-22 109.0 269 34.2
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 8.3e-22 108.6 131 47.3
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 1.9e-21 107.5 256 35.9
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 9.2e-21 105.1 269 33.1
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 1.6e-20 104.4 355 30.4
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 6.0e-20 102.4 132 47.0
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 7.8e-20 102.1 257 33.9
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 1.7e-19 100.9 225 38.2
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.1e-19 99.4 256 37.5
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 5.1e-19 99.4 256 37.5
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 8.6e-19 98.6 321 31.5
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 6.2e-17 92.4 153 45.8
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 6.2e-17 92.4 222 33.8
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 1.7e-14 84.3 164 43.3
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.7e-11 74.3 229 30.1
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 5.1e-11 72.8 82 50.0
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 4.3e-10 69.7 155 41.3
Ah.09g236140 Amaranthus hybridus HOM05D006486 ORTHO05D007888 5.3e-08 62.8 156 35.9
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 2.6e-07 60.5 73 49.3


User provided reference genes

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