Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 4.5e-189 664.5 341 100.0
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 2.5e-155 552.4 336 82.4
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 1.7e-148 529.6 333 77.8
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 3.7e-143 511.9 340 75.0
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 2.0e-141 506.1 334 74.9
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 2.7e-141 505.8 336 74.4
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 1.9e-139 499.6 338 73.1
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 3.3e-139 498.8 334 73.4
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 3.1e-137 492.3 334 71.9
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 3.7e-135 485.3 336 72.3
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 6.4e-135 484.6 257 97.3
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 2.1e-133 479.6 340 71.2
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 2.7e-133 479.2 337 72.1
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 6.0e-133 478.0 336 70.2
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.3e-132 476.1 337 69.4
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 5.1e-132 474.9 327 71.6
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 1.1e-131 473.8 334 70.4
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 1.9e-131 473.0 338 72.2
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 1.9e-131 473.0 335 70.1
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 3.3e-131 472.2 339 70.5
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 3.3e-131 472.2 336 71.1
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 5.6e-131 471.5 340 68.5
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 2.1e-130 469.5 338 68.6
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 3.6e-130 468.8 316 73.7
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 8.1e-130 467.6 340 68.5
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 1.4e-129 466.8 350 67.4
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 1.4e-129 466.8 337 70.6
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 3.1e-129 465.7 338 68.9
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 1.2e-128 463.8 337 68.0
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 2.6e-128 462.6 335 70.4
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 1.3e-127 460.3 344 67.7
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 2.9e-127 459.1 321 70.1
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 4.9e-127 458.4 337 67.7
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 1.1e-126 457.2 316 71.5
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 3.2e-126 455.7 334 67.7
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 7.1e-126 454.5 338 66.6
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 2.1e-125 453.0 342 67.5
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 2.1e-125 453.0 316 71.8
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 4.6e-125 451.8 338 68.9
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 7.8e-125 451.1 335 68.7
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 1.7e-124 449.9 353 67.1
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 1.7e-124 449.9 353 67.1
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 3.9e-124 448.7 341 67.7
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 5.1e-124 448.4 330 68.2
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 6.6e-124 448.0 318 71.1
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 8.6e-124 447.6 338 66.0
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 8.6e-124 447.6 334 67.7
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 2.5e-123 446.0 332 65.7
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 3.3e-123 445.7 338 65.1
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 4.3e-123 445.3 342 65.2
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 5.6e-123 444.9 335 67.2
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 7.3e-123 444.5 338 62.7
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 9.6e-123 444.1 341 64.8
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.6e-122 443.4 342 65.2
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 1.1e-121 440.7 315 66.7
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 1.8e-121 439.9 314 67.5
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 5.2e-121 438.3 342 65.2
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 5.2e-121 438.3 342 65.2
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 5.2e-121 438.3 347 62.2
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 6.8e-121 438.0 342 65.2
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 6.8e-121 438.0 320 70.0
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.5e-120 436.8 315 66.0
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 1.5e-120 436.8 341 64.5
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 1.5e-120 436.8 341 64.5
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 2.0e-120 436.4 341 64.2
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 4.4e-120 435.3 351 63.2
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 4.4e-120 435.3 351 63.2
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 4.4e-120 435.3 351 63.2
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 9.9e-120 434.1 348 61.5
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 9.9e-120 434.1 345 65.5
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 6.4e-119 431.4 336 64.6
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 5.4e-118 428.3 318 68.2
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 1.6e-117 426.8 343 63.6
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 1.0e-116 424.1 338 66.9
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 3.0e-116 422.5 338 66.6
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 3.9e-116 422.2 336 62.5
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 1.1e-115 420.6 338 64.2
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 7.3e-115 417.9 339 64.3
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 4.8e-114 415.2 343 61.8
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 8.1e-114 414.5 341 64.2
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.1e-113 414.1 323 63.2
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.1e-113 414.1 323 63.2
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 1.5e-112 410.2 320 64.7
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 2.6e-112 409.5 342 60.5
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 3.4e-112 409.1 339 62.8
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 7.6e-112 407.9 339 60.2
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 7.6e-112 407.9 321 64.8
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 1.4e-110 403.7 320 63.8
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 1.9e-110 403.3 337 62.6
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 3.2e-110 402.5 345 60.6
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 7.9e-109 397.9 340 60.6
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.7e-108 396.7 318 61.9
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 5.1e-108 395.2 337 59.1
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 1.9e-107 393.3 337 59.3
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 4.8e-106 388.7 342 57.3
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 8.1e-106 387.9 279 69.5
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 1.4e-105 387.1 270 70.0
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 5.3e-105 385.2 338 60.4
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 2.0e-104 383.3 328 60.4
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.3e-103 380.6 331 60.7
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 1.3e-103 380.6 334 56.9
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 1.1e-102 377.5 255 70.6
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 6.0e-101 371.7 341 56.0
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 2.3e-100 369.8 314 61.1
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 5.1e-100 368.6 340 56.2
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 5.1e-100 368.6 339 55.8
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 6.7e-100 368.2 318 60.1
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.6e-98 363.6 337 54.6
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.4e-97 360.5 273 66.7
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 1.8e-97 360.1 299 62.9
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 6.9e-97 358.2 330 55.5
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 1.2e-96 357.5 339 57.5
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 7.6e-96 354.8 318 56.3
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 7.6e-96 354.8 338 55.6
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 6.5e-95 351.7 335 53.7
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 4.2e-94 349.0 339 51.3
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 4.6e-93 345.5 332 56.0
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 3.0e-92 342.8 307 59.3
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 8.7e-92 341.3 402 48.0
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 8.7e-92 341.3 336 53.3
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 5.7e-91 338.6 336 52.7
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 2.8e-90 336.3 327 56.0
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 3.7e-90 335.9 327 55.7
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 6.3e-90 335.1 337 49.3
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 6.3e-90 335.1 327 56.0
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 1.8e-89 333.6 336 51.8
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 2.9e-87 326.2 332 50.6
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 5.0e-87 325.5 328 52.7
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 5.0e-87 325.5 256 62.5
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 8.5e-87 324.7 339 51.9
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 3.2e-86 322.8 340 48.2
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 4.2e-86 322.4 336 50.9
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 1.2e-85 320.9 317 52.4
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 2.7e-85 319.7 332 49.7
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 1.3e-84 317.4 331 49.8
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 2.3e-84 316.6 319 49.8
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 8.7e-84 314.7 338 47.9
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 4.3e-83 312.4 319 49.5
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 2.2e-82 310.1 331 48.6
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 2.2e-82 310.1 331 48.6
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 1.8e-81 307.0 253 61.7
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 2.4e-81 306.6 315 47.6
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 3.4e-80 302.8 337 48.1
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 4.5e-80 302.4 336 46.4
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 3.6e-77 292.7 271 57.6
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 6.1e-77 292.0 190 73.2
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 2.2e-74 283.5 190 71.6
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 3.7e-74 282.7 177 74.6
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.8e-73 280.4 244 59.0
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 4.5e-72 275.8 189 68.8
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.9e-68 262.7 189 66.1
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.5e-67 260.8 189 66.1
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 8.2e-66 255.0 223 60.5
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 1.7e-63 247.3 344 42.7
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 8.0e-61 238.4 183 64.5
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 2.6e-59 233.4 190 58.4
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.4e-57 227.6 184 60.9
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 3.1e-57 226.5 236 51.7
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 1.9e-54 217.2 336 39.0
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 5.2e-52 209.1 226 52.7
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 3.4e-51 206.5 157 64.3
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 3.5e-48 196.4 327 37.3
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 3.6e-37 159.8 163 55.8
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 5.2e-36 156.0 174 51.1
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 2.4e-33 147.1 104 72.1
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 2.4e-33 147.1 172 44.2
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 2.8e-29 133.7 342 31.9
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 4.7e-29 132.9 92 68.5
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 4.0e-28 129.8 95 67.4
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 6.8e-28 129.0 89 65.2
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 5.8e-27 125.9 80 76.2
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 7.5e-27 125.6 81 71.6
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 2.9e-26 123.6 75 77.3
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 3.3e-22 110.2 76 68.4
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 9.9e-19 98.6 75 68.0
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 1.1e-14 85.1 57 70.2
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 2.5e-14 84.0 54 72.2
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 2.1e-13 80.9 75 53.3
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 4.7e-13 79.7 48 75.0
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 4.7e-13 79.7 74 58.1
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 3.9e-07 60.1 69 43.5


User provided reference genes

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