Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 7.8e-211 736.9 371 100.0
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 6.2e-184 647.5 335 96.4
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 2.2e-181 639.0 363 87.1
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 1.3e-165 586.6 362 78.7
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 8.1e-160 567.4 364 76.4
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 5.3e-159 564.7 362 76.5
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 9.0e-159 563.9 364 76.6
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 1.2e-158 563.5 364 75.5
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 2.0e-158 562.8 364 76.9
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 2.9e-157 558.9 364 76.6
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 4.9e-157 558.1 362 76.0
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 6.5e-157 557.8 364 75.5
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 5.5e-156 554.7 355 75.8
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 5.5e-156 554.7 365 75.3
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 9.3e-156 553.9 362 74.9
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 9.3e-156 553.9 364 74.2
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 4.6e-155 551.6 355 75.8
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 3.0e-154 548.9 366 73.5
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 3.9e-154 548.5 371 72.0
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 8.7e-154 547.4 365 74.8
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.1e-153 547.0 364 74.7
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 3.3e-153 545.4 365 72.9
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 5.7e-153 544.7 366 73.2
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 9.6e-153 543.9 364 74.5
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 1.3e-152 543.5 367 72.2
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 2.1e-152 542.7 369 71.5
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 3.7e-152 542.0 361 74.0
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 6.3e-152 541.2 366 73.2
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 6.3e-152 541.2 367 72.8
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 1.8e-151 539.7 364 72.5
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.4e-151 539.3 368 72.8
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.4e-151 539.3 368 72.8
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 3.1e-151 538.9 364 72.5
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 6.9e-151 537.7 362 72.9
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 6.9e-151 537.7 365 73.7
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 4.5e-150 535.0 363 71.9
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 7.6e-150 534.3 355 73.5
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 7.6e-150 534.3 366 72.1
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 3.8e-149 531.9 359 73.5
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 1.9e-148 529.6 366 71.3
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 4.2e-148 528.5 358 74.3
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 1.6e-147 526.6 361 71.7
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 2.1e-147 526.2 358 72.6
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 2.7e-147 525.8 358 72.3
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 6.1e-147 524.6 358 72.3
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 6.1e-147 524.6 358 72.3
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 6.1e-147 524.6 358 72.3
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 2.3e-146 522.7 358 73.2
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 2.3e-146 522.7 358 73.2
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 6.7e-146 521.2 367 71.1
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 1.1e-145 520.4 355 73.0
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 1.1e-145 520.4 360 69.7
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 3.3e-145 518.8 359 71.9
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 5.7e-145 518.1 355 71.8
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 5.7e-145 518.1 365 71.0
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 1.6e-144 516.5 361 70.1
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 1.6e-144 516.5 360 68.6
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 3.7e-144 515.4 358 71.5
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 8.2e-144 514.2 367 70.6
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 1.8e-143 513.1 354 71.2
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 2.4e-143 512.7 354 72.0
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 5.3e-143 511.5 355 71.8
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 6.9e-143 511.1 339 75.5
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 2.0e-142 509.6 370 68.6
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 2.0e-142 509.6 388 67.0
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 4.5e-142 508.4 365 70.1
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 4.5e-142 508.4 386 67.1
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 4.5e-142 508.4 367 70.0
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 5.0e-141 505.0 363 69.1
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 1.9e-140 503.1 368 67.1
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 3.2e-140 502.3 366 67.8
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 7.2e-140 501.1 360 68.6
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 4.6e-139 498.4 287 86.8
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 6.1e-139 498.0 346 69.7
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 6.1e-139 498.0 364 69.2
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 1.0e-138 497.3 371 66.6
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.8e-138 496.5 340 73.5
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 2.3e-138 496.1 363 66.9
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 3.0e-138 495.7 347 72.3
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 3.0e-138 495.7 360 67.8
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 3.9e-138 495.4 364 69.5
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 1.5e-137 493.4 366 66.9
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 3.3e-137 492.3 338 73.1
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.3e-136 490.3 365 68.2
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 1.7e-136 490.0 370 68.6
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 8.2e-136 487.6 327 72.8
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 1.5e-134 483.4 365 66.6
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 3.4e-134 482.3 364 67.3
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 1.0e-133 480.7 365 66.8
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.2e-133 479.6 315 74.3
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 8.5e-133 477.6 439 57.9
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 9.4e-132 474.2 369 62.6
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 6.1e-131 471.5 361 67.9
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 1.4e-130 470.3 339 68.7
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 2.3e-130 469.5 365 63.3
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 7.4e-129 464.5 363 63.1
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.7e-128 463.4 412 61.4
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 1.3e-125 453.8 350 64.6
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 5.0e-125 451.8 423 58.2
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 1.5e-124 450.3 275 81.1
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 4.7e-123 445.3 314 70.1
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 1.7e-120 436.8 289 75.4
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 1.3e-117 427.2 288 73.3
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 8.5e-117 424.5 282 75.2
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 4.1e-111 405.6 311 68.2
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 2.0e-110 403.3 323 63.5
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 2.7e-107 392.9 357 58.3
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 2.3e-106 389.8 363 56.2
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 8.6e-101 371.3 350 54.6
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 8.9e-98 361.3 268 67.2
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 2.0e-97 360.1 327 60.9
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 2.5e-92 343.2 258 66.3
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 1.0e-90 337.8 268 63.1
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 1.3e-88 330.9 358 49.4
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 1.8e-82 310.5 312 51.0
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 7.8e-78 295.0 445 40.2
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 1.6e-67 260.8 361 45.4
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-58 231.5 175 70.3
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.4e-58 231.1 246 55.7
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.5e-57 227.6 361 39.9
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 7.6e-57 225.3 354 40.1
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 7.1e-55 218.8 240 54.6
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 2.8e-51 206.8 210 57.6
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 2.0e-49 200.7 180 63.3
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-48 198.0 180 62.2
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 6.4e-48 195.7 244 50.4
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 2.5e-39 167.2 113 72.6
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 4.8e-27 126.3 126 56.3
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 2.1e-22 110.9 204 39.7
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 1.1e-18 98.6 69 65.2
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 2.5e-15 87.4 222 29.3
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 7.2e-15 85.9 49 83.7
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 9.4e-15 85.5 64 65.6
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 2.6e-09 67.4 35 88.6
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.7e-08 64.7 83 42.2


User provided reference genes

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