Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000129 Carpinus fangiana HOM05D006508 ORTHO05D003378 6.0e-61 237.3 115 100.0
Cfa000130 Carpinus fangiana HOM05D006508 ORTHO05D003378 6.0e-61 237.3 115 100.0
Cfa000102 Carpinus fangiana HOM05D006508 ORTHO05D003378 7.6e-48 193.7 115 83.5
Cfa000103 Carpinus fangiana HOM05D006508 ORTHO05D003378 9.6e-43 176.8 113 77.0
Haze_06882 Corylus avellana HOM05D006508 ORTHO05D003378 5.3e-41 171.0 112 75.0
Haze_06883 Corylus avellana HOM05D006508 ORTHO05D003378 1.5e-40 169.5 112 74.1
Haze_06893 Corylus avellana HOM05D006508 ORTHO05D003378 2.6e-32 142.1 112 63.4
Cfa000104 Carpinus fangiana HOM05D006508 ORTHO05D003378 6.3e-26 120.9 115 57.4
Cfa000101 Carpinus fangiana HOM05D006508 ORTHO05D003378 1.4e-25 119.8 101 63.4
Cfa000132 Carpinus fangiana HOM05D006508 ORTHO05D003378 1.0e-20 103.6 112 47.3
Haze_06892 Corylus avellana HOM05D006508 ORTHO05D003378 4.3e-19 98.2 112 44.6
Prupe.4G217000 Prunus persica HOM05D000275 ORTHO05D003378 1.6e-18 96.3 112 40.2
Prupe.4G013200 Prunus persica HOM05D000275 ORTHO05D003378 2.2e-18 95.9 113 40.7
QL07p003201 Quercus lobata HOM05D006508 ORTHO05D003378 3.1e-17 92.0 113 42.5
QL04p068109 Quercus lobata HOM05D006508 ORTHO05D003378 9.0e-17 90.5 113 42.5
QL07p003185 Quercus lobata HOM05D006508 ORTHO05D003378 1.2e-16 90.1 113 41.6
FvH4_3g01190 Fragaria vesca HOM05D000275 ORTHO05D003378 1.5e-16 89.7 112 40.2
QL04p068115 Quercus lobata HOM05D006508 ORTHO05D003378 3.4e-16 88.6 113 41.6
Ciclev10018268m.g Citrus clementina HOM05D000275 ORTHO05D003378 4.5e-16 88.2 103 45.6
Cpa.g.c39334 Carica papaya HOM05D000275 ORTHO05D003378 7.7e-16 87.4 112 41.1
Cfa000131 Carpinus fangiana HOM05D006508 ORTHO05D003378 3.8e-15 85.1 111 44.1
TAR626G1122 Trochodendron aralioides HOM05D000275 ORTHO05D003378 3.8e-15 85.1 106 41.5
CiPaw.09G100900 Carya illinoinensis HOM05D006508 ORTHO05D003378 6.5e-15 84.3 112 38.4
MD10G1328900 Malus domestica HOM05D000275 ORTHO05D003378 1.4e-14 83.2 103 34.0
Thecc.04G124500 Theobroma cacao HOM05D000275 ORTHO05D003378 1.4e-14 83.2 114 41.2
COL.COLO4_26709 Corchorus olitorius HOM05D006508 ORTHO05D003378 2.5e-14 82.4 112 38.4
COL.COLO4_26711 Corchorus olitorius HOM05D006508 ORTHO05D003378 2.5e-14 82.4 112 37.5
Nn1g07322 Nelumbo nucifera HOM05D000275 ORTHO05D003378 2.5e-14 82.4 106 37.7
Dinv20118 Davidia involucrata HOM05D006508 ORTHO05D003378 3.2e-14 82.0 107 39.3
TAR629G2992 Trochodendron aralioides HOM05D006508 ORTHO05D003378 4.2e-14 81.6 83 41.0
Dinv20121 Davidia involucrata HOM05D006508 ORTHO05D003378 7.2e-14 80.9 105 40.0
COL.COLO4_26721 Corchorus olitorius HOM05D006508 ORTHO05D003378 1.6e-13 79.7 112 34.8
COL.COLO4_03647 Corchorus olitorius HOM05D006508 ORTHO05D003378 2.1e-13 79.3 86 41.9
Rhsim02G0104700 Rhododendron simsii HOM05D000275 ORTHO05D003378 2.1e-13 79.3 112 38.4
CiPaw.09G100300 Carya illinoinensis HOM05D006508 ORTHO05D003378 4.6e-13 78.2 112 38.4
RcHm_v2.0_Chr5g0047311 Rosa chinensis HOM05D006508 ORTHO05D003378 4.6e-13 78.2 112 33.0
TWI38G0468 Tripterygium wilfordii HOM05D000275 ORTHO05D003378 4.6e-13 78.2 112 37.5
TAR629G3202 Trochodendron aralioides HOM05D000275 ORTHO05D003378 4.6e-13 78.2 94 39.4
CiPaw.10G076000 Carya illinoinensis HOM05D006508 ORTHO05D003378 1.0e-12 77.0 112 35.7
RcHm_v2.0_Chr5g0075671 Rosa chinensis HOM05D006508 ORTHO05D003378 2.3e-12 75.9 110 35.5
TWI38G1593 Tripterygium wilfordii HOM05D006508 ORTHO05D003378 2.3e-12 75.9 112 35.7
CiPaw.10G075800 Carya illinoinensis HOM05D006508 ORTHO05D003378 6.7e-12 74.3 113 35.4
Medtr3g056640 Medicago truncatula HOM05D006508 ORTHO05D003378 8.8e-12 73.9 112 32.1
FAN21G1243 Fragaria x ananassa HOM05D000275 ORTHO05D003378 1.5e-11 73.2 102 33.3
CSS0033505 Camellia sinensis var. sinensis HOM05D000275 ORTHO05D003378 2.5e-11 72.4 108 38.9
FAN21G0761 Fragaria x ananassa HOM05D000275 ORTHO05D003378 2.5e-11 72.4 97 36.1
QL02p077688 Quercus lobata HOM05D006508 ORTHO05D003378 2.5e-11 72.4 98 36.7
TPR.G13489 Trifolium pratense HOM05D006508 ORTHO05D003378 2.5e-11 72.4 107 32.7
Manes.12G052803 Manihot esculenta HOM05D006508 ORTHO05D003378 3.3e-11 72.0 111 34.2
Gohir.D09G067950 Gossypium hirsutum HOM05D000275 ORTHO05D003378 4.3e-11 71.6 116 35.3
CiPaw.09G101000 Carya illinoinensis HOM05D000275 ORTHO05D003378 5.7e-11 71.2 112 33.9
Dinv20119 Davidia involucrata HOM05D006508 ORTHO05D003378 5.7e-11 71.2 108 38.9
Dinv20120 Davidia involucrata HOM05D006508 ORTHO05D003378 5.7e-11 71.2 108 38.9
Dinv20122 Davidia involucrata HOM05D006508 ORTHO05D003378 5.7e-11 71.2 108 38.9
Medtr3g046515 Medicago truncatula HOM05D006508 ORTHO05D003378 5.7e-11 71.2 104 32.7
Medtr3g046590 Medicago truncatula HOM05D006508 ORTHO05D003378 7.4e-11 70.9 104 32.7
SGA_v2.0_scaffold7G03794 Striga asiatica HOM05D005176 ORTHO05D006482 9.7e-11 70.5 112 38.4
TPR.G39085 Trifolium pratense HOM05D006508 ORTHO05D003378 9.7e-11 70.5 108 30.6
Dinv07381 Davidia involucrata HOM05D006508 ORTHO05D003378 1.3e-10 70.1 108 38.0
TPR.G4368 Trifolium pratense HOM05D006508 ORTHO05D003378 1.3e-10 70.1 107 30.8
Medtr0071s0070 Medicago truncatula HOM05D006508 ORTHO05D003378 1.7e-10 69.7 104 32.7
Medtr3g046530 Medicago truncatula HOM05D006508 ORTHO05D003378 1.7e-10 69.7 104 32.7
Thecc.06G230700 Theobroma cacao HOM05D006508 ORTHO05D003378 1.7e-10 69.7 116 34.5
Eucgr.D01379 Eucalyptus grandis HOM05D000275 ORTHO05D003378 2.2e-10 69.3 104 33.7
Medtr3g464130 Medicago truncatula HOM05D006508 ORTHO05D003378 2.2e-10 69.3 93 35.5
HPP92_019919 Vanilla planifolia HOM05D000275 ORTHO05D003378 2.8e-10 68.9 100 33.0
Medtr3g046540 Medicago truncatula HOM05D006508 ORTHO05D003378 3.7e-10 68.6 104 32.7
Gohir.D07G080100 Gossypium hirsutum HOM05D000275 ORTHO05D003378 6.3e-10 67.8 109 35.8
Gorai.001G085000 Gossypium raimondii HOM05D000275 ORTHO05D003378 6.3e-10 67.8 109 35.8
Lalb_Chr07g0188461 Lupinus albus HOM05D000275 ORTHO05D003378 6.3e-10 67.8 115 32.2
Lalb_Chr07g0188521 Lupinus albus HOM05D000275 ORTHO05D003378 6.3e-10 67.8 115 32.2
Medtr3g046580 Medicago truncatula HOM05D006508 ORTHO05D003378 6.3e-10 67.8 104 32.7
Thecc.06G230300 Theobroma cacao HOM05D000275 ORTHO05D003378 6.3e-10 67.8 109 34.9
ECA240G2680 Erigeron canadensis HOM05D006508 ORTHO05D003378 8.2e-10 67.4 102 34.3
Migut.M01353 Erythranthe guttata HOM05D006508 ORTHO05D003378 1.1e-09 67.0 110 34.5
FvH4_2g02840 Fragaria vesca HOM05D006508 ORTHO05D003378 1.1e-09 67.0 108 35.2
CiPaw.09G101100 Carya illinoinensis HOM05D006508 ORTHO05D003378 1.4e-09 66.6 97 35.1
Lalb_Chr12g0203611 Lupinus albus HOM05D006508 ORTHO05D003378 1.4e-09 66.6 120 30.8
Gohir.A07G075600 Gossypium hirsutum HOM05D000275 ORTHO05D003378 1.8e-09 66.2 109 32.1
Thecc.06G230500 Theobroma cacao HOM05D000275 ORTHO05D003378 1.8e-09 66.2 83 38.6
RcHm_v2.0_Chr6g0247621 Rosa chinensis HOM05D006508 ORTHO05D003378 2.4e-09 65.9 113 36.3
Sc18g0007010 Simmondsia chinensis HOM05D000275 ORTHO05D003378 2.4e-09 65.9 104 34.6
HPP92_021879 Vanilla planifolia HOM05D006508 ORTHO05D003378 2.4e-09 65.9 92 30.4
DCAR_003257 Daucus carota HOM05D006508 ORTHO05D003378 3.1e-09 65.5 108 35.2
FAN24G0993 Fragaria x ananassa HOM05D006508 ORTHO05D003378 3.1e-09 65.5 108 35.2
Gohir.A09G067950 Gossypium hirsutum HOM05D006508 ORTHO05D003378 3.1e-09 65.5 116 34.5
Oeu049720.1 Olea europaea HOM05D000275 ORTHO05D003378 3.1e-09 65.5 101 35.6
Migut.M01356 Erythranthe guttata HOM05D000275 ORTHO05D003378 4.1e-09 65.1 109 33.9
FAN20G2281 Fragaria x ananassa HOM05D006508 ORTHO05D003378 4.1e-09 65.1 105 34.3
Hma1.2p1_0660F.1_g197500 Hydrangea macrophylla HOM05D000275 ORTHO05D003378 4.1e-09 65.1 108 38.9
Medtr3g046350 Medicago truncatula HOM05D008977 ORTHO05D003378 4.1e-09 65.1 94 36.2
Thecc.06G230600 Theobroma cacao HOM05D006508 ORTHO05D003378 4.1e-09 65.1 112 34.8
TPR.G25278 Trifolium pratense HOM05D006508 ORTHO05D003378 4.1e-09 65.1 107 29.0
PSO210G2170 Papaver somniferum HOM05D000275 ORTHO05D003378 6.9e-09 64.3 109 33.0
Psat6g066360 Pisum sativum HOM05D006508 ORTHO05D003378 6.9e-09 64.3 104 31.7
Thecc.06G230400 Theobroma cacao HOM05D006508 ORTHO05D003378 6.9e-09 64.3 105 35.2
TPR.G25291 Trifolium pratense HOM05D000275 ORTHO05D003378 6.9e-09 64.3 103 32.0
TPR.G25293 Trifolium pratense HOM05D006508 ORTHO05D003378 6.9e-09 64.3 107 29.0
Gohir.A07G075700 Gossypium hirsutum HOM05D006508 ORTHO05D003378 9.1e-09 63.9 90 34.4
Nn2g13360 Nelumbo nucifera HOM05D000275 ORTHO05D003378 9.1e-09 63.9 84 33.3
PGR044G0303 Punica granatum HOM05D006508 ORTHO05D003378 9.1e-09 63.9 101 31.7
TPR.G16537 Trifolium pratense HOM05D006508 ORTHO05D003378 9.1e-09 63.9 107 28.0
CSS0031389 Camellia sinensis var. sinensis HOM05D000275 ORTHO05D003378 1.5e-08 63.2 108 36.1
COL.COLO4_26712 Corchorus olitorius HOM05D006508 ORTHO05D003378 1.5e-08 63.2 70 42.9
Nitab4.5_0010416g0010 Nicotiana tabacum HOM05D000275 ORTHO05D003378 1.5e-08 63.2 91 33.0
PSO832G3328 Papaver somniferum HOM05D000275 ORTHO05D003378 1.5e-08 63.2 109 33.0
Atru.chr1.2501 Acer truncatum HOM05D000275 ORTHO05D003378 2.6e-08 62.4 115 32.2
Migut.M01349 Erythranthe guttata HOM05D000275 ORTHO05D003378 2.6e-08 62.4 108 32.4
Nitab4.5_0001821g0020 Nicotiana tabacum HOM05D000275 ORTHO05D003378 2.6e-08 62.4 112 32.1
Psat0s13238g0040 Pisum sativum HOM05D000275 ORTHO05D003378 2.6e-08 62.4 80 35.0
Psat0s5273g0040 Pisum sativum HOM05D006508 ORTHO05D003378 2.6e-08 62.4 99 32.3
Duzib235G0581 Durio zibethinus HOM05D006508 ORTHO05D003378 3.4e-08 62.0 117 34.2
FAN25G2169 Fragaria x ananassa HOM05D006508 ORTHO05D003378 3.4e-08 62.0 73 37.0
CSS0012199 Camellia sinensis var. sinensis HOM05D000275 ORTHO05D003378 4.5e-08 61.6 95 35.8
Manes.16G001900 Manihot esculenta HOM05D006508 ORTHO05D003378 4.5e-08 61.6 109 36.7
Dinv07380 Davidia involucrata HOM05D006508 ORTHO05D003378 5.9e-08 61.2 92 41.3
Nitab4.5_0001198g0250 Nicotiana tabacum HOM05D006508 ORTHO05D003378 5.9e-08 61.2 104 33.7
DCAR_013213 Daucus carota HOM05D006508 ORTHO05D003378 2.2e-07 59.3 103 34.0
Phvul.006G186900 Phaseolus vulgaris HOM05D006508 ORTHO05D003378 2.2e-07 59.3 82 32.9
FAN15G1252 Fragaria x ananassa HOM05D020255 ORTHO05D003378 3.8e-07 58.5 68 41.2
MBI16_g26175_MAGBIO Magnolia biondii HOM05D006508 ORTHO05D003378 3.8e-07 58.5 83 36.1
Medtr3g464110 Medicago truncatula HOM05D000275 ORTHO05D003378 3.8e-07 58.5 84 34.5
Sc08g0003000 Simmondsia chinensis HOM05D006508 ORTHO05D003378 6.5e-07 57.8 84 33.3
TWI38G1893 Tripterygium wilfordii HOM05D006508 ORTHO05D003378 6.5e-07 57.8 95 29.5
CSS0009125 Camellia sinensis var. sinensis HOM05D000275 ORTHO05D003378 8.5e-07 57.4 85 35.3
Sopen06g019870 Solanum pennellii HOM05D010533 ORTHO05D003378 1.1e-06 57.0 84 34.5
SGA_v2.0_scaffold4G01900 Striga asiatica HOM05D000275 ORTHO05D003378 1.4e-06 56.6 106 29.2
Actinidia12821 Actinidia chinensis HOM05D000275 ORTHO05D003378 1.9e-06 56.2 104 30.8
TWI38G2037 Tripterygium wilfordii HOM05D006508 ORTHO05D003378 2.5e-06 55.8 83 34.9
TPR.G10946 Trifolium pratense HOM05D006508 ORTHO05D003378 4.2e-06 55.1 70 35.7
TPR.G26582 Trifolium pratense HOM05D006508 ORTHO05D003378 4.2e-06 55.1 97 26.8


User provided reference genes

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