Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000076 Carpinus fangiana HOM05D011553 ORTHO05D011499 4.4e-92 341.7 225 100.0
Haze_06968 Corylus avellana HOM05D011553 ORTHO05D011499 5.4e-66 255.0 225 82.7
CiPaw.09G104600 Carya illinoinensis HOM05D011553 ORTHO05D011499 2.8e-62 242.7 223 68.6
QL05p069023 Quercus lobata HOM05D011553 ORTHO05D011499 2.2e-51 206.5 221 63.3
QL05p068658 Quercus lobata HOM05D011553 ORTHO05D011499 1.9e-50 203.4 221 63.8
GSVIVG01003028001 Vitis vinifera HOM05D011553 ORTHO05D011499 1.3e-22 110.9 207 46.9
Prupe.4G007600 Prunus persica HOM05D011553 ORTHO05D011499 1.0e-19 101.3 227 48.9
MD10G1336000 Malus domestica HOM05D011553 ORTHO05D011499 3.6e-17 92.8 208 49.5
Lalb_Chr18g0057111 Lupinus albus HOM05D012373 ORTHO05D011499 1.1e-13 81.3 233 47.6
RcHm_v2.0_Chr5g0000901 Rosa chinensis HOM05D011553 ORTHO05D011499 1.8e-13 80.5 230 42.2
Dinv04415 Davidia involucrata HOM05D011553 ORTHO05D011499 3.1e-13 79.7 163 38.0
Dinv32071 Davidia involucrata HOM05D000063 ORTHO05D000906 4.5e-12 75.9 151 38.4
Rhsim13G0143700 Rhododendron simsii HOM05D011553 ORTHO05D011499 7.7e-12 75.1 144 38.2
Glyma.15G116200 Glycine max HOM05D012373 ORTHO05D011499 1.7e-11 73.9 149 40.9
Glyma.09G011700 Glycine max HOM05D012373 ORTHO05D011499 3.8e-11 72.8 210 45.7
CANSAT56G3989 Cannabis sativa HOM05D011553 ORTHO05D011499 1.5e-10 70.9 101 45.5
FvH4_3g00671 Fragaria vesca HOM05D011553 ORTHO05D011499 1.9e-10 70.5 231 40.7
FAN25G2107 Fragaria x ananassa HOM05D000867 ORTHO05D003703 4.2e-10 69.3 210 43.8
Lalb_Chr20g0119371 Lupinus albus HOM05D012373 ORTHO05D011499 3.6e-09 66.2 238 44.5
FAN21G4011 Fragaria x ananassa HOM05D000063 ORTHO05D000906 4.7e-09 65.9 231 40.3
Lj6g0016935 Lotus japonicus HOM05D012373 ORTHO05D011499 8.8e-08 61.6 138 35.5
Ca_00741_v3 Cicer arietinum L. HOM05D012373 ORTHO05D011499 1.1e-07 61.2 232 44.0
CsaV3_6G048400 Cucumis sativus L. HOM05D056522 ORTHO05D011499 4.4e-07 59.3 135 34.1
VMungo0540G1539 Vigna mungo HOM05D012373 ORTHO05D011499 2.2e-06 57.0 213 41.3
MELO3C007443.2 Cucumis melo HOM05D056522 ORTHO05D011499 4.8e-06 55.8 130 33.1


User provided reference genes

Program Settings