Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 2.2e-143 512.3 264 100.0
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 2.6e-99 365.9 265 78.1
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 2.0e-67 260.0 208 66.8
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 4.4e-51 205.7 190 61.1
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 2.1e-48 196.8 206 55.8
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 4.6e-48 195.7 199 54.8
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 4.6e-48 195.7 194 59.3
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 4.6e-48 195.7 197 57.9
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 2.3e-47 193.4 197 57.4
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 6.6e-47 191.8 202 54.5
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 6.6e-47 191.8 202 54.5
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 3.3e-46 189.5 172 61.6
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 4.3e-46 189.1 200 54.5
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 7.3e-46 188.3 155 65.8
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 9.6e-46 188.0 191 57.6
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 2.8e-45 186.4 208 55.8
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 2.8e-45 186.4 173 61.8
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 3.6e-45 186.0 203 56.2
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 8.1e-45 184.9 199 54.3
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 8.1e-45 184.9 183 56.3
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 8.1e-45 184.9 183 55.7
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 1.8e-44 183.7 195 55.4
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 1.8e-44 183.7 165 60.0
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 3.1e-44 183.0 175 58.9
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 2.0e-43 180.3 204 52.9
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 2.0e-43 180.3 120 71.7
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 3.4e-43 179.5 200 56.5
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 5.8e-43 178.7 160 56.9
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 5.8e-43 178.7 145 64.1
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 5.8e-43 178.7 128 69.5
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 7.6e-43 178.3 197 54.3
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 9.9e-43 177.9 115 77.4
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 2.2e-42 176.8 198 53.5
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 3.8e-42 176.0 201 52.2
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 1.4e-41 174.1 187 51.3
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 2.4e-41 173.3 202 50.0
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 3.2e-41 172.9 193 53.9
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 5.4e-41 172.2 130 68.5
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 9.3e-41 171.4 120 68.3
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 9.3e-41 171.4 192 52.6
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 1.2e-40 171.0 101 80.2
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.6e-40 170.6 120 69.2
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 1.6e-40 170.6 161 55.3
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.1e-40 170.2 197 52.3
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 2.7e-40 169.9 190 50.5
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 4.6e-40 169.1 202 51.0
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 6.0e-40 168.7 200 55.0
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 6.0e-40 168.7 183 50.3
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 7.8e-40 168.3 197 50.8
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 7.8e-40 168.3 157 56.1
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 1.7e-39 167.2 114 71.1
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 2.3e-39 166.8 186 52.7
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 3.0e-39 166.4 197 49.7
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 3.9e-39 166.0 210 48.6
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 3.9e-39 166.0 195 52.8
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 6.6e-39 165.2 191 51.3
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 6.6e-39 165.2 145 55.9
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 8.7e-39 164.9 194 47.9
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.1e-38 164.5 191 51.8
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 1.9e-38 163.7 97 79.4
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 1.9e-38 163.7 189 53.4
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 1.6e-37 160.6 214 46.7
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 1.6e-37 160.6 200 48.5
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 1.6e-37 160.6 108 74.1
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 2.1e-37 160.2 108 74.1
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 3.6e-37 159.5 182 48.9
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 6.2e-37 158.7 108 72.2
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 1.1e-36 157.9 187 49.2
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.4e-36 157.5 193 51.3
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 1.4e-36 157.5 193 50.3
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.4e-36 157.5 193 51.3
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 1.8e-36 157.1 113 67.3
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 1.8e-36 157.1 186 48.9
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 2.4e-36 156.8 194 47.4
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 3.1e-36 156.4 194 46.4
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 3.1e-36 156.4 197 50.3
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 4.0e-36 156.0 94 80.9
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 6.9e-36 155.2 189 47.1
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 9.0e-36 154.8 176 53.4
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 9.0e-36 154.8 126 62.7
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 2.6e-35 153.3 221 45.2
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 2.9e-34 149.8 157 50.3
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.8e-34 149.4 99 73.7
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 2.4e-33 146.7 124 58.9
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 4.2e-33 146.0 206 43.7
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 1.2e-32 144.4 95 71.6
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 1.0e-31 141.4 96 69.8
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 1.0e-31 141.4 187 45.5
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 1.7e-31 140.6 189 47.6
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 1.5e-30 137.5 97 69.1
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 2.9e-26 123.2 72 80.6
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 3.8e-26 122.9 83 73.5
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 2.4e-25 120.2 187 43.3
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 4.2e-25 119.4 154 41.6
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 7.1e-25 118.6 137 51.8
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 7.1e-25 118.6 102 54.9
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 1.2e-24 117.9 102 55.9
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 6.0e-24 115.5 100 58.0
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 1.1e-22 111.3 88 63.6
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 8.1e-21 105.1 84 50.0
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 8.1e-21 105.1 75 64.0
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 3.1e-20 103.2 106 48.1
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 2.6e-19 100.1 61 73.8
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 4.6e-16 89.4 89 50.6
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 3.8e-10 69.7 101 45.5
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 6.5e-10 68.9 43 72.1
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 1.0e-07 61.6 96 39.6


User provided reference genes

Program Settings