Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000047 Carpinus fangiana HOM05D011684 ORTHO05D011224 3.7e-105 384.8 184 100.0
Haze_07006 Corylus avellana HOM05D011684 ORTHO05D011224 7.0e-96 354.0 185 94.1
QL05p068133 Quercus lobata HOM05D011684 ORTHO05D011224 5.1e-54 214.9 150 70.7
Prupe.4G005300 Prunus persica HOM05D011684 ORTHO05D011224 2.4e-43 179.5 154 59.1
CiPaw.09G107800 Carya illinoinensis HOM05D011684 ORTHO05D011224 6.5e-41 171.4 153 61.4
Potri.006G018200 Populus trichocarpa HOM05D011684 ORTHO05D011224 7.9e-39 164.5 154 57.8
RcHm_v2.0_Chr5g0000641 Rosa chinensis HOM05D011684 ORTHO05D011224 3.3e-37 159.1 156 54.5
Sabra06G0013200 Salix brachista HOM05D011684 ORTHO05D011224 1.2e-34 150.6 150 54.7
FAN21G3814 Fragaria x ananassa HOM05D002244 ORTHO05D002269 3.4e-34 149.1 157 52.2
FvH4_3g00481 Fragaria vesca HOM05D011684 ORTHO05D011224 2.2e-33 146.4 152 53.3
Cpa.g.sc27.244 Carica papaya HOM05D011684 ORTHO05D011224 1.9e-32 143.3 154 49.4
FAN25G0603 Fragaria x ananassa HOM05D011684 ORTHO05D011224 5.5e-32 141.7 156 52.6
FAN25G1760 Fragaria x ananassa HOM05D002244 ORTHO05D002269 2.1e-31 139.8 154 51.3
Sabra16G0011700 Salix brachista HOM05D011684 ORTHO05D011224 1.8e-27 126.7 140 49.3
Thecc.06G238700 Theobroma cacao HOM05D011684 ORTHO05D011224 7.2e-24 114.8 123 49.6
Lsat_1_v5_gn_4_63581 Lactuca sativa HOM05D002244 ORTHO05D002269 1.0e-22 110.9 152 44.7
FvH4_3g00440 Fragaria vesca HOM05D002244 ORTHO05D002269 2.7e-15 86.3 62 59.7
Phvul.006G140200 Phaseolus vulgaris HOM05D013456 ORTHO05D011224 2.7e-15 86.3 143 38.5
Atru.chr1.2295 Acer truncatum HOM05D011684 ORTHO05D011224 4.7e-15 85.5 84 42.9
Glyma.09G013200 Glycine max HOM05D013456 ORTHO05D011224 1.8e-14 83.6 154 37.7
Glyma.15G118051 Glycine max HOM05D013456 ORTHO05D011224 5.1e-14 82.0 155 39.4
TPR.G10578 Trifolium pratense HOM05D013456 ORTHO05D011224 2.0e-13 80.1 155 36.8
COL.COLO4_31926 Corchorus olitorius HOM05D027799 ORTHO05D011224 7.4e-13 78.2 150 38.7
VMungo0540G0506 Vigna mungo HOM05D013456 ORTHO05D011224 7.4e-13 78.2 103 45.6
ClCG01G021280 Citrullus lanatus HOM05D029069 ORTHO05D011224 2.2e-12 76.6 154 37.0
ECA234G3997 Erigeron canadensis HOM05D011684 ORTHO05D011224 8.2e-12 74.7 149 35.6
Prupe.2G317800 Prunus persica HOM05D002916 ORTHO05D003152 3.5e-10 69.3 150 30.7
Psat1g174320 Pisum sativum HOM05D013456 ORTHO05D011224 5.9e-10 68.6 155 36.1
Sed0018070 Sechium edule HOM05D029069 ORTHO05D011224 5.9e-10 68.6 157 34.4
Medtr2g026595 Medicago truncatula HOM05D013456 ORTHO05D011224 6.5e-09 65.1 157 35.7
CsaV3_6G048300 Cucumis sativus L. HOM05D029069 ORTHO05D011224 8.5e-09 64.7 149 34.2
Gorai.009G184300 Gossypium raimondii HOM05D027799 ORTHO05D011224 1.1e-08 64.3 159 30.8
Gohir.A05G175800 Gossypium hirsutum HOM05D027799 ORTHO05D011224 1.5e-08 63.9 159 31.4
Gohir.D05G178850 Gossypium hirsutum HOM05D027799 ORTHO05D011224 1.5e-08 63.9 159 31.4
Lj6g0017788 Lotus japonicus HOM05D013456 ORTHO05D011224 7.2e-08 61.6 155 34.2
arahy.Tifrunner.gnm1.ann1.LP2F40 Arachis hypogaea HOM05D013456 ORTHO05D011224 9.4e-08 61.2 154 31.8
arahy.Tifrunner.gnm1.ann1.PMB72Z Arachis hypogaea HOM05D013456 ORTHO05D011224 1.6e-07 60.5 154 31.8
Sed0001048 Sechium edule HOM05D039430 ORTHO05D034713 1.6e-07 60.5 155 33.5
Duzib093G0112 Durio zibethinus HOM05D002916 ORTHO05D003152 2.1e-07 60.1 164 27.4
MELO3C008013.2 Cucumis melo HOM05D029069 ORTHO05D011224 3.6e-07 59.3 154 33.8
ATR0078G023 Amborella trichopoda HOM05D002916 ORTHO05D003152 4.7e-07 58.9 162 28.4
ClCG01G010970 Citrullus lanatus HOM05D039430 ORTHO05D034713 1.0e-06 57.8 71 50.7
Lalb_Chr01g0018131 Lupinus albus HOM05D002916 ORTHO05D003152 2.3e-06 56.6 167 26.9
Ca_00753_v3 Cicer arietinum L. HOM05D013456 ORTHO05D011224 4.0e-06 55.8 94 43.6
ClCG01G000110 Citrullus lanatus HOM05D002916 ORTHO05D003152 4.0e-06 55.8 145 27.6
Glyma.16G177600 Glycine max HOM05D002255 ORTHO05D002288 8.8e-06 54.7 101 36.6


User provided reference genes

Program Settings