Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 9.2e-167 590.1 292 100.0
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 5.9e-73 278.5 291 55.7
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 8.6e-72 274.6 290 53.8
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 1.8e-69 266.9 296 55.1
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 5.2e-69 265.4 285 57.9
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 9.8e-68 261.2 285 54.7
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 6.4e-67 258.5 291 52.9
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 1.1e-66 257.7 293 52.9
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 1.1e-66 257.7 291 52.6
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.4e-66 257.3 291 52.6
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 3.5e-65 252.7 305 50.2
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 4.6e-65 252.3 278 52.5
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 5.6e-63 245.4 296 51.7
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 1.2e-62 244.2 285 50.9
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 2.1e-62 243.4 279 52.7
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 2.8e-62 243.0 290 52.4
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 3.6e-62 242.7 286 49.7
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 4.7e-62 242.3 299 52.2
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 8.1e-62 241.5 286 51.0
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 4.4e-60 235.7 290 51.4
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 5.8e-60 235.3 296 48.3
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 1.7e-59 233.8 287 49.8
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 2.2e-59 233.4 270 54.1
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 2.9e-59 233.0 291 50.2
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 6.4e-59 231.9 270 53.7
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 8.3e-59 231.5 270 53.7
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 3.2e-58 229.6 293 48.8
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 3.9e-56 222.6 283 47.0
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 3.9e-56 222.6 278 47.1
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.1e-55 221.1 296 48.6
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 1.5e-55 220.7 281 49.8
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 3.3e-55 219.5 271 47.2
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 9.5e-55 218.0 270 51.1
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 2.8e-54 216.5 296 44.9
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 6.2e-54 215.3 266 47.4
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 8.1e-54 214.9 296 44.9
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 2.3e-53 213.4 284 47.5
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 2.0e-52 210.3 290 45.5
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 1.7e-51 207.2 246 54.1
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 3.8e-51 206.1 282 46.8
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 8.4e-51 204.9 284 44.7
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 8.4e-51 204.9 284 47.5
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 1.4e-50 204.1 274 46.7
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 2.4e-50 203.4 197 54.3
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 2.4e-50 203.4 197 54.3
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 5.4e-50 202.2 278 47.8
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 7.1e-50 201.8 305 43.9
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 9.2e-50 201.4 283 45.6
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 1.6e-49 200.7 296 46.6
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 6.0e-49 198.7 278 46.0
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 7.8e-49 198.4 293 43.7
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 2.3e-48 196.8 280 46.4
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 3.9e-48 196.1 280 43.9
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 1.1e-47 194.5 312 46.5
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 1.1e-47 194.5 280 47.9
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.5e-47 194.1 346 39.6
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 1.9e-47 193.7 318 45.9
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 1.9e-47 193.7 343 39.9
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 2.5e-47 193.4 204 54.4
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 3.3e-47 193.0 248 51.2
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 1.2e-46 191.0 356 39.3
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 1.6e-46 190.7 313 46.6
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 2.8e-46 189.9 290 44.8
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 1.1e-45 188.0 269 42.4
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 1.8e-45 187.2 288 41.3
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 5.2e-45 185.7 318 45.3
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 2.6e-44 183.3 306 45.4
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 2.6e-44 183.3 306 45.4
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 2.6e-44 183.3 230 48.3
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 4.4e-44 182.6 305 45.2
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 4.4e-44 182.6 305 45.2
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 4.4e-44 182.6 365 41.6
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 1.7e-43 180.6 297 45.8
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 2.9e-43 179.9 293 43.3
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 3.8e-43 179.5 287 45.6
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 4.9e-43 179.1 285 45.6
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 3.2e-42 176.4 216 48.1
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 5.4e-42 175.6 241 45.2
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 9.3e-42 174.9 258 43.0
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 3.5e-41 172.9 296 41.9
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 6.0e-41 172.2 199 53.8
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.7e-40 170.6 327 38.5
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 3.0e-40 169.9 328 38.1
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.9e-39 167.2 328 38.1
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 1.9e-39 167.2 306 43.1
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 3.3e-39 166.4 337 36.8
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 7.3e-39 165.2 306 42.8
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 1.6e-38 164.1 351 40.5
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 8.1e-38 161.8 229 46.7
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 2.4e-37 160.2 238 47.5
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 5.3e-37 159.1 207 46.9
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 3.4e-36 156.4 241 42.3
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 3.8e-35 152.9 198 46.5
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 3.8e-35 152.9 198 46.5
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 6.4e-35 152.1 274 38.7
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 2.4e-34 150.2 281 39.1
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 2.8e-30 136.7 229 39.3
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 3.0e-24 116.7 198 40.9
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 3.8e-19 99.8 116 53.4
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 9.3e-18 95.1 195 37.4
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 1.2e-17 94.7 118 50.8
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 6.0e-17 92.4 94 51.1
C01p22270 Brassica napus HOM05D007298 ORTHO05D009226 2.1e-09 67.4 124 45.2
SEGI_13333 Sequoiadendron giganteum HOM05D007298 ORTHO05D009226 5.1e-08 62.8 200 32.0
BcaC01g06536 Brassica carinata HOM05D007298 ORTHO05D009226 9.7e-07 58.5 115 42.6


User provided reference genes

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