Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 2.9e-210 734.9 365 100.0
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 1.3e-173 613.2 365 81.9
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 3.5e-171 605.1 365 81.1
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 3.8e-170 601.7 363 80.4
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 3.8e-170 601.7 365 79.5
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 3.2e-169 598.6 365 78.9
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 1.6e-168 596.3 365 78.9
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 2.7e-168 595.5 365 78.6
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 2.7e-168 595.5 365 79.2
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 1.0e-167 593.6 373 78.6
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 2.3e-167 592.4 365 78.6
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 2.3e-167 592.4 365 79.2
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 2.3e-167 592.4 365 78.6
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 3.0e-167 592.0 361 78.7
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 5.2e-167 591.3 365 78.6
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 5.2e-167 591.3 365 78.6
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 6.8e-167 590.9 365 78.6
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 8.8e-167 590.5 364 78.8
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 8.8e-167 590.5 365 78.1
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 1.2e-166 590.1 365 79.5
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 1.5e-166 589.7 365 79.2
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 3.4e-166 588.6 365 77.3
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 3.4e-166 588.6 365 77.8
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 5.7e-166 587.8 365 77.5
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 1.3e-165 586.6 379 76.8
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 1.7e-165 586.3 365 77.5
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 2.2e-165 585.9 365 78.9
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 2.2e-165 585.9 365 77.8
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 8.3e-165 583.9 365 77.0
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 1.4e-164 583.2 365 77.0
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 1.4e-164 583.2 403 73.0
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 1.8e-164 582.8 365 78.1
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 1.2e-163 580.1 365 77.8
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 4.5e-163 578.2 365 76.4
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 7.7e-163 577.4 365 76.4
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 2.9e-162 575.5 389 74.3
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 3.8e-162 575.1 365 75.3
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 1.1e-161 573.5 365 76.7
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 1.5e-161 573.2 365 76.2
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 1.9e-161 572.8 365 75.9
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 4.2e-161 571.6 395 71.4
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 4.2e-161 571.6 364 75.8
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 5.5e-161 571.2 394 71.6
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 7.2e-161 570.9 398 71.4
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 7.2e-161 570.9 364 75.3
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 7.2e-161 570.9 368 76.4
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.2e-160 570.1 348 79.6
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.8e-160 568.9 365 74.5
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 8.0e-160 567.4 365 74.8
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 1.8e-159 566.2 365 74.5
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.0e-159 565.5 395 71.1
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 4.0e-159 565.1 335 80.9
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 6.8e-159 564.3 365 75.1
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 2.2e-157 559.3 365 73.4
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 1.6e-155 553.1 438 65.8
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 1.0e-154 550.4 365 72.1
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 1.1e-153 547.0 397 68.8
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 1.5e-153 546.6 447 64.4
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 1.9e-153 546.2 361 71.5
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 7.3e-153 544.3 365 70.7
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 3.6e-152 542.0 333 79.3
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 8.0e-152 540.8 368 72.6
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 2.0e-150 536.2 346 73.7
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 5.6e-145 518.1 363 67.2
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 6.2e-144 514.6 455 59.6
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 8.0e-144 514.2 364 67.0
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 2.3e-143 512.7 364 67.0
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.2e-142 510.4 305 80.0
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 3.4e-142 508.8 365 66.3
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.1e-136 489.6 365 69.0
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.8e-135 486.5 304 78.0
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.8e-135 486.5 304 78.0
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 5.8e-134 481.5 365 67.1
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 7.8e-131 471.1 319 71.5
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 2.3e-130 469.5 365 64.7
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 2.5e-129 466.1 282 79.8
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 2.5e-129 466.1 365 64.9
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.6e-126 456.1 272 81.6
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 3.4e-126 455.7 278 78.4
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 6.6e-122 441.4 268 78.7
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 1.1e-105 387.5 224 83.0
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 4.2e-60 236.1 143 80.4
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 1.1e-55 221.5 235 54.9
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 8.5e-53 211.8 356 32.3
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 1.5e-52 211.1 124 81.5
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 3.2e-52 209.9 159 67.9
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 4.4e-25 119.8 69 84.1
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 3.5e-22 110.2 77 64.9
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 8.9e-18 95.5 295 28.1
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 5.1e-13 79.7 57 68.4
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 2.4e-07 60.8 261 28.4
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 1.6e-06 58.2 281 24.2


User provided reference genes

Program Settings