Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 8.2e-182 640.2 306 100.0
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 1.3e-142 510.0 305 77.7
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.8e-141 506.1 303 79.5
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 7.0e-141 504.2 291 80.1
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 1.6e-140 503.1 302 79.1
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 4.5e-140 501.5 285 79.6
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 4.5e-140 501.5 285 81.4
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 4.5e-140 501.5 293 78.2
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 5.9e-140 501.1 290 79.7
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 2.2e-139 499.2 283 79.5
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 3.8e-139 498.4 285 80.7
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 6.5e-139 497.7 305 76.1
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.1e-138 496.9 285 80.4
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 1.5e-138 496.5 294 78.6
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.5e-138 495.7 285 80.7
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 5.5e-138 494.6 305 75.1
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 5.5e-138 494.6 303 76.2
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 7.2e-138 494.2 285 80.0
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 9.4e-138 493.8 303 75.9
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 1.2e-137 493.4 295 77.3
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 1.6e-137 493.0 290 77.2
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 2.1e-137 492.7 283 78.1
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 2.1e-137 492.7 285 78.9
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 2.7e-137 492.3 303 76.9
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 8.0e-137 490.7 286 77.3
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 8.0e-137 490.7 303 77.9
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 3.0e-136 488.8 283 79.5
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 4.0e-136 488.4 303 74.9
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 6.8e-136 487.6 283 78.8
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 8.8e-136 487.3 283 79.2
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 1.2e-135 486.9 298 77.2
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 2.6e-135 485.7 296 75.7
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 4.4e-135 485.0 299 75.3
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 9.8e-135 483.8 282 79.4
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 9.8e-135 483.8 298 76.8
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 6.3e-134 481.1 285 77.9
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 9.1e-133 477.2 291 74.9
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 9.1e-133 477.2 294 76.5
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 1.2e-132 476.9 288 75.0
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 3.5e-132 475.3 293 74.7
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 1.7e-131 473.0 290 75.2
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 1.7e-131 473.0 291 74.6
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 2.3e-131 472.6 288 75.0
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 2.3e-131 472.6 295 75.3
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 2.9e-131 472.2 300 71.7
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 6.6e-131 471.1 294 71.8
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 1.1e-130 470.3 283 74.2
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 1.1e-130 470.3 285 74.4
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.9e-130 469.5 290 72.4
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 5.5e-130 468.0 288 75.3
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 9.5e-130 467.2 290 74.5
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 1.6e-129 466.5 287 74.6
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 8.0e-129 464.2 301 72.1
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 1.4e-128 463.4 290 71.7
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 5.2e-128 461.5 292 74.7
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 5.2e-128 461.5 283 72.8
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 1.5e-127 459.9 270 77.0
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 1.5e-127 459.9 304 71.7
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 2.0e-127 459.5 290 73.8
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 2.6e-127 459.1 285 73.7
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 1.3e-126 456.8 305 71.8
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 2.8e-126 455.7 294 72.8
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 3.7e-126 455.3 285 74.4
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 6.3e-126 454.5 290 69.7
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 8.3e-126 454.1 291 73.5
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 8.3e-126 454.1 290 73.4
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 8.3e-126 454.1 290 73.1
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 1.4e-125 453.4 290 72.1
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 1.4e-125 453.4 295 71.2
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 1.4e-125 453.4 295 71.2
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 1.4e-125 453.4 290 72.4
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 2.4e-125 452.6 291 73.2
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 5.4e-125 451.4 291 73.2
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 3.5e-124 448.7 306 69.9
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 3.5e-124 448.7 290 72.4
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 3.5e-124 448.7 291 73.2
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 7.3e-122 441.0 283 67.5
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 9.5e-122 440.7 318 66.7
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 2.8e-121 439.1 285 69.1
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 5.8e-119 431.4 299 66.2
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 2.9e-118 429.1 254 77.2
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 1.3e-115 420.2 286 66.1
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 1.5e-114 416.8 248 76.6
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 4.3e-114 415.2 299 67.9
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 1.2e-111 407.1 244 75.8
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 5.8e-111 404.8 293 63.8
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 1.6e-108 396.7 249 73.1
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 1.6e-108 396.7 244 74.2
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 2.7e-108 396.0 283 64.7
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 1.9e-106 389.8 244 71.3
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 2.5e-106 389.4 310 58.4
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 1.2e-105 387.1 285 62.1
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 1.6e-100 370.2 283 58.3
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 6.0e-100 368.2 297 59.3
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 1.5e-95 353.6 282 57.1
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 5.8e-95 351.7 210 77.6
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 3.2e-85 319.3 194 74.2
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 5.1e-75 285.4 297 49.8
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 1.4e-69 267.3 142 83.1
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 7.9e-52 208.4 143 67.8
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.7e-49 200.7 109 78.0
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 4.8e-49 199.1 115 72.2
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.3e-46 191.0 118 78.0
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 4.2e-45 186.0 105 81.9
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 1.4e-43 181.0 281 38.8
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 3.9e-35 152.9 160 51.9
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.7e-33 147.5 111 61.3
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 2.1e-28 130.6 100 61.0
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 4.1e-24 116.3 87 64.4
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 2.1e-20 104.0 126 44.4
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 1.0e-14 85.1 45 80.0
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 1.7e-14 84.3 55 67.3
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 7.5e-10 68.9 40 75.0
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.3e-09 68.2 42 69.0
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 7.0e-08 62.4 69 46.4


User provided reference genes

Program Settings