Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 2.4e-262 908.3 454 100.0
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 3.4e-216 755.0 447 83.2
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 5.7e-216 754.2 451 82.9
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 1.0e-212 743.4 452 81.2
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 1.5e-211 739.6 449 82.0
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 9.5e-211 736.9 452 80.8
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 1.2e-210 736.5 451 82.0
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 2.1e-210 735.7 448 81.9
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 6.2e-210 734.2 452 80.1
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 1.1e-209 733.4 451 79.8
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 3.1e-209 731.9 450 79.8
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 2.0e-208 729.2 443 81.5
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 3.4e-208 728.4 445 80.9
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 4.4e-208 728.0 443 80.6
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 7.5e-208 727.2 451 79.8
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 9.8e-208 726.9 448 79.2
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 2.2e-207 725.7 451 79.6
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 2.9e-207 725.3 451 80.3
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.1e-206 723.4 446 81.2
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 1.9e-206 722.6 450 78.4
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 2.4e-206 722.2 443 80.8
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 2.4e-206 722.2 450 78.2
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 5.4e-206 721.1 445 79.8
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 9.2e-206 720.3 452 79.6
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.2e-205 719.9 443 80.6
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 1.6e-205 719.5 451 79.8
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 2.7e-205 718.8 416 85.1
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 2.7e-205 718.8 450 78.0
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 2.7e-205 718.8 449 79.1
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 3.5e-205 718.4 450 78.0
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 4.6e-205 718.0 481 75.3
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 6.0e-205 717.6 462 77.5
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 1.0e-204 716.8 434 80.0
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 1.0e-204 716.8 476 78.4
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 1.7e-204 716.1 443 80.4
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.3e-204 715.7 442 79.9
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 3.3e-203 711.8 434 80.0
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 3.3e-203 711.8 469 75.1
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 3.6e-202 708.4 451 78.0
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 1.1e-201 706.8 447 77.6
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 3.1e-201 705.3 448 77.9
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 6.8e-201 704.1 452 75.4
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 6.8e-201 704.1 430 80.9
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 1.3e-199 699.9 454 75.3
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 2.9e-199 698.7 446 76.9
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 4.9e-199 698.0 455 75.8
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 6.4e-199 697.6 448 76.3
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 2.4e-198 695.7 471 73.0
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 5.4e-198 694.5 450 74.4
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 5.4e-198 694.5 450 76.2
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 5.4e-198 694.5 434 76.7
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 7.1e-198 694.1 436 76.1
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 1.6e-197 693.0 448 74.8
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 2.1e-197 692.6 449 75.7
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 2.7e-197 692.2 449 75.5
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 1.3e-196 689.9 446 78.3
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 5.1e-196 688.0 454 74.2
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 6.6e-196 687.6 434 75.8
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 8.6e-196 687.2 451 74.3
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 3.3e-195 685.3 453 74.8
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 3.6e-194 681.8 451 74.1
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 3.6e-194 681.8 448 73.7
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 6.2e-194 681.0 449 75.1
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 8.9e-193 677.2 452 73.9
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 2.6e-192 675.6 448 73.2
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 5.8e-192 674.5 448 73.2
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 7.6e-192 674.1 450 73.6
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 1.3e-191 673.3 451 72.5
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 1.3e-191 673.3 451 74.5
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 1.3e-191 673.3 450 72.4
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 1.7e-191 672.9 470 70.6
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 1.7e-191 672.9 457 72.2
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 4.9e-191 671.4 451 74.7
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 8.4e-191 670.6 462 71.9
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 2.4e-190 669.1 448 73.9
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 3.2e-190 668.7 448 72.3
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 7.1e-190 667.5 442 74.2
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 2.1e-189 666.0 449 73.7
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 2.1e-189 666.0 451 72.1
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 2.7e-189 665.6 451 71.8
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 4.6e-189 664.8 468 70.1
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 4.6e-189 664.8 447 73.8
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 1.0e-188 663.7 477 69.2
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 1.7e-188 662.9 447 72.3
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 2.3e-188 662.5 456 74.1
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 4.3e-187 658.3 503 70.0
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 6.2e-186 654.4 463 73.2
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 4.0e-185 651.7 476 71.0
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 6.9e-185 651.0 450 73.6
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 2.6e-184 649.0 455 70.3
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 5.8e-184 647.9 480 68.5
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 1.4e-182 643.3 406 78.8
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 2.1e-181 639.4 412 75.5
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 7.3e-179 630.9 433 69.5
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 2.8e-178 629.0 447 70.2
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 2.9e-175 619.0 412 73.1
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 1.4e-174 616.7 411 75.4
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 9.3e-174 614.0 372 81.5
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 7.9e-173 610.9 386 75.9
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 4.0e-169 598.6 457 66.5
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 1.2e-168 597.0 450 68.7
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 3.0e-164 582.4 465 65.2
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 1.8e-161 573.2 448 65.6
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 4.3e-155 552.0 440 60.7
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 1.6e-154 550.1 426 62.4
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 2.0e-152 543.1 320 84.1
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 2.2e-151 539.7 426 62.9
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 1.8e-148 530.0 430 59.5
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 1.9e-147 526.6 432 58.8
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 5.2e-132 475.3 454 58.8
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 1.2e-128 464.2 278 79.1
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 1.7e-114 417.2 434 47.2
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 2.8e-114 416.4 447 55.0
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 1.2e-104 384.4 425 48.9
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 1.5e-99 367.5 315 62.2
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 1.6e-96 357.5 370 55.1
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 4.6e-88 329.3 182 87.4
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 3.9e-87 326.2 483 39.5
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 9.0e-60 235.3 181 67.4
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 1.9e-57 227.6 339 42.2
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 1.9e-54 217.6 108 91.7
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 5.6e-54 216.1 369 40.9
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 2.0e-43 181.0 360 36.4
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 2.6e-43 180.6 124 75.0
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 8.4e-42 175.6 124 73.4
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 4.3e-38 163.3 137 62.8
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 3.7e-29 133.7 87 67.8
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 9.1e-28 129.0 85 70.6
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 9.4e-25 119.0 127 48.8
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.1e-22 112.1 83 66.3
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 4.8e-21 106.7 67 71.6
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 1.8e-20 104.8 185 32.4
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 9.1e-20 102.4 104 57.7
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 3.5e-19 100.5 70 70.0
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 5.0e-18 96.7 101 53.5
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 1.9e-17 94.7 67 73.1
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 2.1e-16 91.3 74 58.1
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 1.8e-15 88.2 60 76.7


User provided reference genes

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