Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 6.4e-174 614.0 315 100.0
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 5.6e-93 345.1 288 60.4
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 1.2e-92 344.0 321 56.1
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 9.9e-90 334.3 317 58.4
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 1.3e-89 334.0 319 57.1
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 6.4e-89 331.6 290 58.6
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 3.2e-88 329.3 317 57.4
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 4.1e-88 328.9 273 63.7
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 4.6e-87 325.5 302 57.0
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 6.0e-87 325.1 282 61.0
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 1.0e-86 324.3 271 63.5
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 8.6e-86 321.2 290 57.6
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 1.9e-85 320.1 277 63.2
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 3.3e-85 319.3 288 58.0
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 5.6e-85 318.5 288 60.1
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 1.2e-84 317.4 283 59.0
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 1.8e-83 313.5 310 54.5
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 3.4e-82 309.3 273 61.5
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 4.9e-81 305.4 308 54.2
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 4.9e-81 305.4 285 56.5
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 1.9e-80 303.5 275 58.9
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 3.2e-80 302.8 268 60.8
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 4.1e-80 302.4 278 59.7
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 5.4e-80 302.0 196 75.5
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 6.0e-79 298.5 275 57.8
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 1.7e-78 297.0 276 56.9
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 5.1e-78 295.4 325 54.8
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 5.1e-78 295.4 283 59.0
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 1.1e-77 294.3 219 68.5
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 4.3e-77 292.4 232 65.9
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 4.7e-76 288.9 253 58.5
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 4.7e-76 288.9 247 60.7
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 2.4e-75 286.6 269 56.5
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 4.0e-75 285.8 300 56.3
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 6.9e-75 285.0 275 55.3
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 1.5e-74 283.9 275 56.4
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 1.5e-74 283.9 216 65.7
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 5.8e-74 282.0 275 56.4
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 9.9e-74 281.2 274 55.5
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 1.7e-73 280.4 295 53.6
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 2.2e-73 280.0 256 58.2
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 2.9e-73 279.6 268 57.5
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 2.9e-73 279.6 274 54.4
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 3.8e-73 279.3 261 58.2
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 3.8e-73 279.3 289 55.7
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 6.4e-73 278.5 217 63.1
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 1.4e-72 277.3 263 57.4
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 1.4e-72 277.3 308 51.6
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 7.1e-72 275.0 205 66.3
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 3.5e-71 272.7 288 54.2
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 4.6e-71 272.3 205 65.4
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 6.0e-71 271.9 205 64.9
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 1.3e-70 270.8 218 62.8
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 1.7e-70 270.4 309 48.2
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 1.5e-69 267.3 270 52.2
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 2.8e-68 263.1 263 53.6
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 3.6e-68 262.7 263 53.6
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 4.8e-68 262.3 305 47.9
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 1.8e-67 260.4 271 50.9
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 4.0e-67 259.2 264 54.2
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 5.3e-67 258.8 306 48.4
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 6.9e-67 258.5 266 53.0
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 6.9e-67 258.5 278 54.7
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.2e-66 257.7 262 54.2
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 1.2e-66 257.7 262 54.2
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 1.2e-66 257.7 265 51.7
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 2.0e-66 256.9 213 62.4
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 4.5e-66 255.8 267 52.1
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 9.9e-66 254.6 262 52.7
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 4.9e-65 252.3 276 50.4
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 2.4e-64 250.0 265 50.9
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 2.4e-64 250.0 257 54.1
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 2.1e-63 246.9 317 48.9
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 4.6e-63 245.7 297 47.1
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 7.9e-63 245.0 244 57.8
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 7.9e-63 245.0 194 58.8
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 3.3e-61 239.6 261 51.7
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 7.4e-61 238.4 274 47.1
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 9.6e-61 238.0 254 52.4
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 1.3e-60 237.7 276 49.6
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 2.1e-60 236.9 416 38.7
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 4.9e-57 225.7 356 43.8
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 1.4e-56 224.2 263 51.7
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 4.0e-51 206.1 148 65.5
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 1.5e-50 204.1 214 52.8
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 4.9e-49 199.1 275 44.0
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 1.8e-46 190.7 234 43.6
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 3.1e-43 179.9 261 39.1
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 7.9e-39 165.2 258 40.7
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 3.9e-38 162.9 98 76.5
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 3.7e-36 156.4 256 39.8
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 5.9e-34 149.1 212 42.0
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 5.9e-34 149.1 202 44.6
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 1.1e-29 134.8 141 54.6
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 2.2e-28 130.6 119 59.7
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 4.2e-24 116.3 160 41.9
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 5.5e-24 115.9 196 42.3
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 3.6e-23 113.2 224 33.9
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 9.7e-21 105.1 214 33.2
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 4.1e-19 99.8 90 56.7
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 3.8e-17 93.2 62 67.7
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 1.9e-16 90.9 117 41.0
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 2.5e-16 90.5 143 42.7
CiPaw.11G163100 Carya illinoinensis HOM05D002970 ORTHO05D009571 1.7e-12 77.8 151 36.4
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 1.7e-12 77.8 166 40.4
CiPaw.09G014900 Carya illinoinensis HOM05D002970 ORTHO05D009571 2.7e-10 70.5 107 43.9


User provided reference genes

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