Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g15640 Coffea canephora HOM05D000434 ORTHO05D153700 2.6e-32 141.4 67 100.0
Cc11_g16010 Coffea canephora HOM05D000434 ORTHO05D001445 4.8e-10 67.4 48 75.0
Hma1.2p1_0079F.1_g041170 Hydrangea macrophylla HOM05D000434 ORTHO05D001445 7.6e-08 60.1 48 66.7
TAR629G2949 Trochodendron aralioides HOM05D000434 ORTHO05D001445 2.2e-07 58.5 48 64.6
Dinv20585 Davidia involucrata HOM05D000434 ORTHO05D001445 2.9e-07 58.2 48 64.6
Lj3C1061G3 Lonicera japonica HOM05D000434 ORTHO05D001445 2.9e-07 58.2 46 65.2
Eucgr.H02471 Eucalyptus grandis HOM05D000434 ORTHO05D001445 3.8e-07 57.8 46 63.0
Manes.12G020700 Manihot esculenta HOM05D000434 ORTHO05D001445 3.8e-07 57.8 46 63.0
Peaxi162Scf00089g01227 Petunia axillaris HOM05D000434 ORTHO05D001445 3.8e-07 57.8 47 61.7
Rhsim12G0039100 Rhododendron simsii HOM05D000434 ORTHO05D001445 3.8e-07 57.8 41 70.7
DCAR_007453 Daucus carota HOM05D000434 ORTHO05D001445 4.9e-07 57.4 48 62.5
vmacro01115 Vaccinium macrocarpon HOM05D000434 ORTHO05D001445 4.9e-07 57.4 41 70.7
QL03p056826 Quercus lobata HOM05D000434 ORTHO05D001445 6.5e-07 57.0 46 63.0
SalBow6G3285 Salvia bowleyana HOM05D000434 ORTHO05D001445 6.5e-07 57.0 46 65.2
Nitab4.5_0003736g0040 Nicotiana tabacum HOM05D000434 ORTHO05D001445 1.1e-06 56.2 46 63.0
Nitab4.5_0008037g0040 Nicotiana tabacum HOM05D000434 ORTHO05D001445 1.1e-06 56.2 46 63.0
Solyc03g112050.4 Solanum lycopersicum HOM05D000434 ORTHO05D001445 1.1e-06 56.2 46 63.0
Sopen03g031150 Solanum pennellii HOM05D000434 ORTHO05D001445 1.1e-06 56.2 46 63.0
PGSC0003DMG400018195 Solanum tuberosum HOM05D000434 ORTHO05D001445 1.1e-06 56.2 46 63.0
Cc04_g11320 Coffea canephora HOM05D000434 ORTHO05D001445 1.4e-06 55.8 48 64.6
CSS0044990 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D001445 1.9e-06 55.5 46 60.9
Dinv38517 Davidia involucrata HOM05D000434 ORTHO05D001445 1.9e-06 55.5 48 62.5
Nitab4.5_0000524g0070 Nicotiana tabacum HOM05D000434 ORTHO05D001445 1.9e-06 55.5 45 62.2
TAR622G0022 Trochodendron aralioides HOM05D000434 ORTHO05D001445 1.9e-06 55.5 48 60.4
CiPaw.12G032400 Carya illinoinensis HOM05D000434 ORTHO05D001445 2.5e-06 55.1 46 63.0
FvH4_4g25400 Fragaria vesca HOM05D000434 ORTHO05D001445 2.5e-06 55.1 46 63.0
FAN07G0821 Fragaria x ananassa HOM05D000434 ORTHO05D001445 2.5e-06 55.1 46 63.0
FAN12G0774 Fragaria x ananassa HOM05D000434 ORTHO05D001445 2.5e-06 55.1 46 63.0
Peaxi162Scf00128g00447 Petunia axillaris HOM05D000434 ORTHO05D001445 2.5e-06 55.1 46 63.0
Solyc05g013770.4 Solanum lycopersicum HOM05D000434 ORTHO05D001445 2.5e-06 55.1 46 63.0
Sopen05g008690 Solanum pennellii HOM05D000434 ORTHO05D001445 2.5e-06 55.1 46 63.0
PGSC0003DMG400011725 Solanum tuberosum HOM05D000434 ORTHO05D001445 2.5e-06 55.1 46 63.0
Aa31LG7G11110 Aethionema arabicum HOM05D000434 ORTHO05D001445 3.2e-06 54.7 46 63.0
Cfa009239 Carpinus fangiana HOM05D000434 ORTHO05D001445 3.2e-06 54.7 46 60.9
ECA232G0736 Erigeron canadensis HOM05D000434 ORTHO05D001445 3.2e-06 54.7 46 63.0
FAN17G2230 Fragaria x ananassa HOM05D000434 ORTHO05D001445 3.2e-06 54.7 46 63.0
FAN22G0849 Fragaria x ananassa HOM05D000434 ORTHO05D001445 3.2e-06 54.7 46 63.0
MD16G1103500 Malus domestica HOM05D000434 ORTHO05D001445 3.2e-06 54.7 46 63.0
RcHm_v2.0_Chr4g0432711 Rosa chinensis HOM05D000434 ORTHO05D001445 3.2e-06 54.7 46 63.0
Atru.chr11.2168 Acer truncatum HOM05D000434 ORTHO05D001445 4.2e-06 54.3 46 60.9
CAN.G436.4 Capsicum annuum HOM05D000434 ORTHO05D001445 4.2e-06 54.3 46 60.9
CDE08G1119 Ceratophyllum demersum HOM05D000434 ORTHO05D001445 4.2e-06 54.3 55 54.5
Ciclev10020223m.g Citrus clementina HOM05D000434 ORTHO05D001445 4.2e-06 54.3 46 60.9
Eucgr.B00211 Eucalyptus grandis HOM05D000434 ORTHO05D001445 4.2e-06 54.3 46 63.0
Oeu023455.2 Olea europaea HOM05D000434 ORTHO05D001445 4.2e-06 54.3 48 60.4
Oeu049172.1 Olea europaea HOM05D000434 ORTHO05D001445 4.2e-06 54.3 45 62.2
MSTRG.9695 Avicennia marina HOM05D000434 ORTHO05D001445 5.5e-06 53.9 41 65.9
CANSAT80G1614 Cannabis sativa HOM05D000434 ORTHO05D001445 5.5e-06 53.9 46 60.9
HanXRQChr16g0504781 Helianthus annuus HOM05D000434 ORTHO05D001445 5.5e-06 53.9 46 60.9
Peaxi162Scf00801g00048 Petunia axillaris HOM05D000434 ORTHO05D001445 5.5e-06 53.9 46 60.9
Potri.010G049100 Populus trichocarpa HOM05D000434 ORTHO05D001445 5.5e-06 53.9 43 58.1
Prupe.1G242500 Prunus persica HOM05D000434 ORTHO05D001445 5.5e-06 53.9 46 60.9
Hund25402 Selenicereus undatus HOM05D000434 ORTHO05D001445 5.5e-06 53.9 45 57.8
GSVIVG01007619001 Vitis vinifera HOM05D000434 ORTHO05D001445 5.5e-06 53.9 48 62.5
Aqoxy5G03700 Aquilegia oxysepala HOM05D000434 ORTHO05D001445 7.1e-06 53.5 47 59.6
Haze_12274 Corylus avellana HOM05D000434 ORTHO05D001445 7.1e-06 53.5 46 58.7
Duzib128G1901 Durio zibethinus HOM05D000434 ORTHO05D001445 7.1e-06 53.5 45 60.0
FvH4_5g06570 Fragaria vesca HOM05D000434 ORTHO05D001445 7.1e-06 53.5 46 63.0
FAN08G0959 Fragaria x ananassa HOM05D000434 ORTHO05D001445 7.1e-06 53.5 46 63.0
FAN18G2892 Fragaria x ananassa HOM05D000434 ORTHO05D001445 7.1e-06 53.5 46 63.0
MD13G1103300 Malus domestica HOM05D000434 ORTHO05D001445 7.1e-06 53.5 46 60.9
Manes.06G111800 Manihot esculenta HOM05D000434 ORTHO05D001445 7.1e-06 53.5 46 60.9
RcHm_v2.0_Chr7g0192261 Rosa chinensis HOM05D000434 ORTHO05D001445 7.1e-06 53.5 46 63.0
TWI36G1613 Tripterygium wilfordii HOM05D000434 ORTHO05D001445 7.1e-06 53.5 45 60.0
MSTRG.4346 Avicennia marina HOM05D000434 ORTHO05D001445 9.3e-06 53.1 47 57.4
CAN.G126.49 Capsicum annuum HOM05D000434 ORTHO05D001445 9.3e-06 53.1 46 60.9
Gohir.A03G075100 Gossypium hirsutum HOM05D000434 ORTHO05D001445 9.3e-06 53.1 46 60.9
Gohir.D03G101900 Gossypium hirsutum HOM05D000434 ORTHO05D001445 9.3e-06 53.1 46 60.9
Gorai.003G107300 Gossypium raimondii HOM05D000434 ORTHO05D001445 9.3e-06 53.1 46 60.9
Hma1.2p1_1092F.1_g255920 Hydrangea macrophylla HOM05D000434 ORTHO05D001445 9.3e-06 53.1 46 60.9
Lj9A441T90 Lonicera japonica HOM05D000434 ORTHO05D001445 9.3e-06 53.1 48 60.4
Nn4g22558 Nelumbo nucifera HOM05D000434 ORTHO05D001445 9.3e-06 53.1 46 60.9
Oeu044592.1 Olea europaea HOM05D000434 ORTHO05D001445 9.3e-06 53.1 46 58.7
PGR119G2073 Punica granatum HOM05D000434 ORTHO05D001445 9.3e-06 53.1 46 56.5
SalBow3G1647 Salvia bowleyana HOM05D000434 ORTHO05D001445 9.3e-06 53.1 41 63.4
Hund06042 Selenicereus undatus HOM05D000434 ORTHO05D001445 9.3e-06 53.1 43 60.5
SGA_v2.0_scaffold75G24919 Striga asiatica HOM05D000434 ORTHO05D001445 9.3e-06 53.1 41 65.9
Thecc.03G116800 Theobroma cacao HOM05D000434 ORTHO05D001445 9.3e-06 53.1 46 60.9


User provided reference genes

Program Settings