Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 3.6e-169 598.2 306 100.0
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 1.1e-109 400.6 251 80.1
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 9.2e-109 397.5 253 79.1
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 1.2e-108 397.1 301 70.4
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 1.2e-108 397.1 248 80.6
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 1.6e-108 396.7 251 79.3
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 2.7e-108 396.0 301 71.8
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 1.1e-106 390.6 302 69.5
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 1.5e-106 390.2 242 79.8
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 7.3e-106 387.9 266 73.3
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 9.5e-106 387.5 260 75.8
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 9.5e-106 387.5 285 71.2
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 2.8e-105 386.0 255 76.5
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 6.2e-105 384.8 264 75.4
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 1.1e-104 384.0 281 70.1
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 1.8e-104 383.3 308 68.2
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 4.0e-104 382.1 256 73.4
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 6.8e-104 381.3 270 71.5
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 6.8e-104 381.3 301 65.4
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 8.9e-104 380.9 266 74.1
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 2.0e-103 379.8 243 77.8
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.3e-102 377.1 305 67.5
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 2.9e-102 375.9 281 71.2
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 3.7e-102 375.6 305 67.5
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 6.4e-102 374.8 305 67.2
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 6.4e-102 374.8 301 66.1
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 1.9e-101 373.2 268 71.3
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 2.4e-101 372.9 298 66.4
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 4.1e-101 372.1 283 68.9
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 7.1e-101 371.3 250 74.0
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.2e-100 370.5 249 72.7
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 1.6e-100 370.2 256 72.7
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 1.6e-100 370.2 259 74.1
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 2.1e-100 369.8 284 66.5
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 2.7e-100 369.4 282 69.1
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 2.7e-100 369.4 309 66.3
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 7.8e-100 367.9 297 67.7
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 7.8e-100 367.9 297 67.7
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 7.8e-100 367.9 302 66.2
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 1.7e-99 366.7 249 73.5
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 3.0e-99 365.9 274 70.1
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 5.1e-99 365.2 241 74.7
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 8.6e-99 364.4 267 70.8
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 8.6e-99 364.4 275 68.0
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 8.6e-99 364.4 284 65.8
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 1.5e-98 363.6 262 70.6
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 1.5e-98 363.6 300 66.0
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.9e-98 363.2 277 68.6
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.9e-98 363.2 277 68.6
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 1.6e-97 360.1 250 73.2
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 2.8e-97 359.4 258 70.9
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 8.1e-97 357.8 269 67.3
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.1e-96 357.5 241 75.9
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 1.1e-96 357.5 264 71.6
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.8e-96 356.7 296 66.6
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 5.2e-96 355.1 308 61.4
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 5.8e-95 351.7 307 62.5
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 7.6e-95 351.3 255 68.6
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 7.6e-95 351.3 265 67.2
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 1.3e-94 350.5 261 69.0
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 1.7e-94 350.1 288 63.9
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 4.9e-94 348.6 254 68.5
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 1.1e-93 347.4 272 64.7
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 1.9e-93 346.7 253 68.8
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 7.1e-93 344.7 275 63.6
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 1.6e-92 343.6 259 66.4
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 2.1e-92 343.2 292 63.0
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 2.1e-92 343.2 282 67.7
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 2.7e-92 342.8 263 66.5
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 3.5e-92 342.4 267 65.5
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 7.8e-92 341.3 286 63.6
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 1.0e-91 340.9 312 61.2
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 6.6e-91 338.2 283 62.5
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 1.1e-90 337.4 298 63.4
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.1e-90 337.4 254 70.5
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 1.2e-89 334.0 223 74.4
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 2.1e-89 333.2 291 62.2
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 6.2e-89 331.6 269 65.1
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 8.1e-89 331.3 257 66.9
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 2.4e-88 329.7 266 63.9
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 5.3e-88 328.6 297 61.6
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 6.4e-86 321.6 237 68.4
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 3.2e-85 319.3 228 70.6
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 7.1e-85 318.2 247 66.4
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 9.3e-85 317.8 248 66.1
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 6.6e-83 311.6 254 59.8
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 1.5e-82 310.5 264 60.6
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 1.8e-80 303.5 259 60.6
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 8.4e-78 294.7 237 65.0
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 2.1e-76 290.0 256 59.0
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 6.0e-76 288.5 227 67.4
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 6.0e-76 288.5 244 63.5
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 1.8e-75 287.0 195 74.9
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 9.0e-72 274.6 247 59.1
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 1.3e-67 260.8 185 68.6
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 3.8e-62 242.7 276 51.8
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.5e-61 240.0 305 49.5
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 3.0e-59 233.0 227 52.4
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 3.9e-59 232.6 226 51.8
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 9.4e-53 211.5 254 42.1
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 3.0e-43 179.9 132 68.2
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.7e-41 174.1 291 43.3
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 3.7e-41 172.9 235 39.6
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 1.4e-40 171.0 234 38.0
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 3.5e-31 139.8 244 34.0
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 1.3e-30 137.9 87 74.7
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 1.8e-27 127.5 134 53.7
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 2.7e-20 103.6 131 45.0
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 4.4e-18 96.3 85 56.5
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 8.3e-17 92.0 70 65.7
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 4.2e-13 79.7 52 69.2
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 9.5e-13 78.6 62 64.5
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.5e-10 71.2 104 44.2
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 7.5e-10 68.9 73 56.2
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 7.5e-10 68.9 73 56.2
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 9.8e-10 68.6 90 41.1
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-09 67.8 53 58.5
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 2.2e-09 67.4 73 54.8
Rhsim03G0260900 Rhododendron simsii HOM05D021265 ORTHO05D339689 1.7e-06 57.8 49 57.1


User provided reference genes

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