Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 2.6e-96 355.5 199 100.0
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 3.4e-72 275.4 198 75.8
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 6.1e-69 264.6 196 74.5
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 6.7e-68 261.2 195 74.4
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 6.7e-68 261.2 191 74.3
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 1.5e-67 260.0 205 70.2
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 3.3e-67 258.8 203 71.4
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 1.6e-66 256.5 202 69.3
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 1.6e-66 256.5 205 70.7
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 2.2e-66 256.1 202 70.3
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 2.2e-66 256.1 204 71.1
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 2.2e-66 256.1 204 71.1
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 6.3e-66 254.6 202 75.2
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 1.1e-65 253.8 184 73.9
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 1.1e-65 253.8 204 70.1
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 2.4e-65 252.7 203 71.9
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 2.4e-65 252.7 203 71.9
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 3.1e-65 252.3 203 69.5
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 4.1e-65 251.9 200 71.0
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 5.3e-65 251.5 206 67.5
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 9.1e-65 250.8 156 79.5
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 1.2e-64 250.4 198 71.2
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 1.5e-64 250.0 204 69.6
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 2.6e-64 249.2 197 69.0
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 2.6e-64 249.2 200 69.5
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 2.6e-64 249.2 201 73.6
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 4.5e-64 248.4 217 65.0
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 5.9e-64 248.1 173 75.7
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 7.7e-64 247.7 171 76.0
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 2.2e-63 246.1 157 82.8
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 2.2e-63 246.1 157 84.1
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 2.2e-63 246.1 197 69.0
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 2.9e-63 245.7 201 69.7
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 2.9e-63 245.7 197 70.6
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 5.0e-63 245.0 157 79.0
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 6.5e-63 244.6 205 69.3
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 8.5e-63 244.2 176 75.0
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 8.5e-63 244.2 200 70.0
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 1.4e-62 243.4 203 68.5
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 1.9e-62 243.0 199 70.4
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 1.9e-62 243.0 194 70.1
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 2.5e-62 242.7 192 64.6
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 2.5e-62 242.7 197 70.1
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 3.2e-62 242.3 197 67.0
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 4.2e-62 241.9 199 69.3
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 5.5e-62 241.5 199 68.3
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 9.4e-62 240.7 218 65.6
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 9.4e-62 240.7 154 81.2
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 1.2e-61 240.4 202 68.3
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 1.6e-61 240.0 200 71.0
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 2.1e-61 239.6 168 73.8
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 2.1e-61 239.6 168 73.8
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 3.6e-61 238.8 210 67.1
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 4.6e-61 238.4 192 70.8
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 6.1e-61 238.0 198 67.7
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 6.1e-61 238.0 158 84.8
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 7.9e-61 237.7 199 65.3
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 1.8e-60 236.5 199 67.3
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 3.0e-60 235.7 194 67.0
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 3.9e-60 235.3 199 71.4
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 3.9e-60 235.3 153 75.8
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 3.9e-60 235.3 153 75.8
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 5.1e-60 235.0 201 64.7
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 5.1e-60 235.0 199 67.3
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 6.7e-60 234.6 195 70.3
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 8.8e-60 234.2 131 87.0
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 2.0e-59 233.0 199 67.8
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 3.3e-59 232.3 200 64.5
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 3.3e-59 232.3 197 64.0
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 4.4e-59 231.9 207 64.3
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 4.4e-59 231.9 208 65.9
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 7.4e-59 231.1 188 67.6
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 7.4e-59 231.1 187 68.4
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 1.7e-58 229.9 195 67.2
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 2.8e-58 229.2 205 65.4
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 2.8e-58 229.2 128 87.5
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 8.2e-58 227.6 199 69.3
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 1.4e-57 226.9 203 63.5
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 4.1e-57 225.3 194 64.4
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 5.3e-57 224.9 203 65.0
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 9.1e-57 224.2 203 65.0
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 9.1e-57 224.2 200 66.0
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 4.5e-56 221.9 217 60.4
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 4.5e-56 221.9 194 64.4
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 5.9e-56 221.5 209 65.1
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 5.9e-56 221.5 200 64.5
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 1.7e-55 219.9 200 67.0
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 3.8e-55 218.8 195 64.1
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 8.5e-55 217.6 173 67.6
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 1.1e-54 217.2 215 64.2
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 1.9e-54 216.5 196 63.8
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 2.5e-54 216.1 121 87.6
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 2.7e-53 212.6 197 63.5
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 1.0e-52 210.7 116 85.3
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 1.7e-50 203.4 116 82.8
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 1.4e-49 200.3 174 61.5
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 4.1e-49 198.7 131 77.9
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 5.9e-48 194.9 193 57.0
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 4.2e-46 188.7 157 65.0
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 9.4e-46 187.6 130 70.8
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 1.0e-44 184.1 113 77.0
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 3.0e-44 182.6 113 77.9
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 4.0e-44 182.2 183 52.5
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 2.6e-43 179.5 111 73.9
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 4.4e-43 178.7 115 73.9
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 1.6e-37 160.2 199 52.8
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 2.1e-37 159.8 129 65.1
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 2.3e-36 156.4 110 62.7
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 5.0e-23 112.1 129 39.5
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 4.4e-19 99.0 109 44.0
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 4.1e-17 92.4 106 46.2
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 3.5e-16 89.4 52 76.9
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 2.8e-13 79.7 144 29.9


User provided reference genes

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