Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g12880 Coffea canephora HOM05D007106 ORTHO05D007770 1.0e-38 162.9 82 100.0
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 2.1e-15 85.5 81 50.6
Oeu022764.1 Olea europaea HOM05D007106 ORTHO05D007770 9.6e-13 76.6 88 48.9
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 2.4e-11 72.0 84 45.2
Actinidia35002 Actinidia chinensis HOM05D007106 ORTHO05D007770 6.9e-11 70.5 81 45.7
Peaxi162Scf01256g00221 Petunia axillaris HOM05D007106 ORTHO05D007770 3.4e-10 68.2 81 45.7
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 7.6e-10 67.0 81 44.4
Haze_12000 Corylus avellana HOM05D007106 ORTHO05D007770 1.3e-09 66.2 81 43.2
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 1.7e-09 65.9 76 46.1
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 1.7e-09 65.9 76 46.1
vmacro16544 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 3.8e-09 64.7 81 44.4
Hma1.2p1_1936F.1_g308220 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 5.0e-09 64.3 85 48.2
Hma1.2p1_2516F.1_g323695 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 5.0e-09 64.3 85 48.2
HanXRQChr17g0570821 Helianthus annuus HOM05D021717 ORTHO05D022533 6.5e-09 63.9 87 43.7
Nitab4.5_0000121g0170 Nicotiana tabacum HOM05D007106 ORTHO05D007770 6.5e-09 63.9 83 41.0
PGR083G1166 Punica granatum HOM05D007106 ORTHO05D007770 8.4e-09 63.5 88 46.6
Actinidia19038 Actinidia chinensis HOM05D007106 ORTHO05D007770 2.5e-08 62.0 81 39.5
ECA234G3064 Erigeron canadensis HOM05D021717 ORTHO05D022533 3.2e-08 61.6 88 44.3
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 4.2e-08 61.2 82 43.9
Solyc07g150120.1 Solanum lycopersicum HOM05D007106 ORTHO05D007770 4.2e-08 61.2 77 40.3
ClCG04G012220 Citrullus lanatus HOM05D007106 ORTHO05D007770 9.3e-08 60.1 76 44.7
MD06G1194400 Malus domestica HOM05D007106 ORTHO05D007770 1.2e-07 59.7 82 45.1
TAR371G0193 Trochodendron aralioides HOM05D007106 ORTHO05D007770 1.2e-07 59.7 77 39.0
Nitab4.5_0008269g0020 Nicotiana tabacum HOM05D007106 ORTHO05D007770 1.6e-07 59.3 81 43.2
SalBow7G1857 Salvia bowleyana HOM05D007106 ORTHO05D007770 2.7e-07 58.5 82 40.2
Sopen06g004820 Solanum pennellii HOM05D007106 ORTHO05D007770 2.7e-07 58.5 77 40.3
PGSC0003DMG400019989 Solanum tuberosum HOM05D007106 ORTHO05D007770 2.7e-07 58.5 80 43.8
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 3.5e-07 58.2 81 39.5
HanXRQChr12g0380811 Helianthus annuus HOM05D021717 ORTHO05D022533 6.1e-07 57.4 88 39.8
Eucgr.B00514 Eucalyptus grandis HOM05D007106 ORTHO05D007770 7.9e-07 57.0 79 40.5
Glyma.03G007400 Glycine max HOM05D007691 ORTHO05D008758 7.9e-07 57.0 84 40.5
Sopen12g025630 Solanum pennellii HOM05D007106 ORTHO05D007770 7.9e-07 57.0 77 36.4
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 1.0e-06 56.6 83 43.4
GSVIVG01007993001 Vitis vinifera HOM05D007106 ORTHO05D007770 1.0e-06 56.6 78 38.5
Cc04_g16540 Coffea canephora HOM05D007106 ORTHO05D007770 1.3e-06 56.2 89 41.6
Sc04g0008030 Simmondsia chinensis HOM05D024185 ORTHO05D023810 1.8e-06 55.8 80 36.2
Actinidia37624 Actinidia chinensis HOM05D007106 ORTHO05D007770 2.3e-06 55.5 81 39.5
Dinv38719 Davidia involucrata HOM05D007106 ORTHO05D007770 2.3e-06 55.5 83 41.0
Rhsim12G0155900 Rhododendron simsii HOM05D007106 ORTHO05D007770 3.0e-06 55.1 83 38.6
Manes.14G078900 Manihot esculenta HOM05D007106 ORTHO05D007770 3.9e-06 54.7 83 39.8
Sed0002642 Sechium edule HOM05D007106 ORTHO05D007770 3.9e-06 54.7 80 43.8
Sed0016719 Sechium edule HOM05D007106 ORTHO05D007770 6.7e-06 53.9 77 42.9
CSS0008414 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 8.7e-06 53.5 76 38.2
Nitab4.5_0006000g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 8.7e-06 53.5 85 38.8


User provided reference genes

Program Settings