Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 4.9e-97 357.8 185 100.0
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 1.5e-50 203.4 179 60.3
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 1.5e-50 203.4 182 58.2
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 3.4e-50 202.2 193 58.0
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 2.2e-49 199.5 124 76.6
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 6.5e-49 198.0 183 56.8
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 1.1e-48 197.2 125 75.2
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 1.4e-48 196.8 123 77.2
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 1.9e-48 196.4 123 74.8
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 5.5e-48 194.9 183 55.7
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 9.3e-48 194.1 168 62.5
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 1.2e-47 193.7 172 60.5
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 1.6e-47 193.4 126 74.6
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 3.6e-47 192.2 124 72.6
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 4.6e-47 191.8 172 59.9
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 4.6e-47 191.8 124 74.2
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 1.0e-46 190.7 120 75.8
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 1.0e-46 190.7 193 54.9
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.0e-46 190.7 120 75.0
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 1.8e-46 189.9 123 74.0
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 1.8e-46 189.9 123 71.5
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 2.3e-46 189.5 151 62.9
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 2.3e-46 189.5 182 57.1
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 3.9e-46 188.7 108 81.5
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 5.1e-46 188.3 124 71.8
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 6.7e-46 188.0 143 66.4
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 6.7e-46 188.0 181 56.9
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 1.1e-45 187.2 125 70.4
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 1.1e-45 187.2 123 70.7
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 1.9e-45 186.4 175 56.0
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 3.3e-45 185.7 123 74.0
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 3.3e-45 185.7 169 58.6
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 4.3e-45 185.3 180 54.4
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 7.4e-45 184.5 124 73.4
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 7.4e-45 184.5 180 53.9
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 1.6e-44 183.3 122 72.1
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 2.2e-44 183.0 121 72.7
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 2.8e-44 182.6 124 71.8
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 3.7e-44 182.2 124 68.5
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 4.8e-44 181.8 120 73.3
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 4.8e-44 181.8 131 67.9
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 4.8e-44 181.8 120 68.3
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 6.3e-44 181.4 127 68.5
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 6.3e-44 181.4 130 65.4
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 6.3e-44 181.4 125 70.4
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 6.3e-44 181.4 125 68.8
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 6.3e-44 181.4 171 57.3
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 8.2e-44 181.0 130 70.0
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 8.2e-44 181.0 121 71.1
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 1.4e-43 180.3 119 71.4
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 1.8e-43 179.9 122 70.5
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 1.8e-43 179.9 130 65.4
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 2.4e-43 179.5 166 56.0
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 3.1e-43 179.1 164 57.9
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 5.3e-43 178.3 122 70.5
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 9.1e-43 177.6 118 69.5
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 9.1e-43 177.6 120 69.2
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 1.2e-42 177.2 167 55.1
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 1.2e-42 177.2 120 71.7
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 1.3e-41 173.7 123 68.3
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 2.2e-41 172.9 118 70.3
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 2.9e-41 172.6 125 65.6
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 2.9e-41 172.6 116 72.4
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 3.8e-41 172.2 125 64.8
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 3.8e-41 172.2 120 68.3
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.0e-41 171.8 125 64.8
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.9e-40 169.9 189 50.3
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 2.5e-40 169.5 123 65.9
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 4.2e-40 168.7 117 70.1
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 7.2e-40 167.9 152 54.6
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 4.6e-39 165.2 120 65.0
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 4.6e-39 165.2 152 53.3
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 1.8e-38 163.3 119 63.9
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 1.8e-38 163.3 110 70.9
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 2.3e-38 162.9 139 58.3
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 2.3e-38 162.9 120 63.3
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 3.0e-38 162.5 161 54.0
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 5.1e-38 161.8 120 65.0
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 5.1e-38 161.8 120 65.0
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 5.1e-38 161.8 120 65.0
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 5.1e-38 161.8 120 65.0
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 5.1e-38 161.8 120 65.0
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 5.1e-38 161.8 119 62.2
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 5.1e-38 161.8 118 61.9
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 6.7e-38 161.4 120 60.8
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 8.8e-38 161.0 119 65.5
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 8.8e-38 161.0 120 65.0
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 1.1e-37 160.6 120 65.0
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 1.1e-37 160.6 120 65.0
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 1.1e-37 160.6 120 65.0
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 1.1e-37 160.6 148 54.1
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 3.3e-37 159.1 116 64.7
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 4.4e-37 158.7 116 63.8
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 1.3e-36 157.1 99 71.7
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 1.7e-36 156.8 179 53.1
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 1.7e-36 156.8 164 50.0
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 2.2e-36 156.4 120 60.8
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 2.8e-36 156.0 120 60.8
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 6.5e-33 144.8 122 58.2
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.5e-29 133.7 96 62.5
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 3.8e-25 119.0 90 65.6
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 3.8e-25 119.0 90 65.6
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 3.8e-25 119.0 90 65.6
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 5.0e-25 118.6 79 75.9
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 1.2e-23 114.0 81 63.0
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 3.0e-22 109.4 145 41.4
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 2.0e-21 106.7 85 63.5
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 1.4e-19 100.5 121 44.6
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 1.6e-18 97.1 123 39.8
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 5.0e-17 92.0 129 38.0
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 4.2e-16 89.0 108 47.2
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 4.4e-13 79.0 114 36.0
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.7e-12 77.0 52 61.5
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 2.1e-07 60.1 126 34.1
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 2.1e-07 60.1 42 61.9


User provided reference genes

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