Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 7.3e-79 297.7 225 100.0
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 2.1e-38 163.3 265 54.7
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 2.6e-36 156.4 104 76.9
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 4.2e-34 149.1 116 69.0
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 9.3e-34 147.9 118 68.6
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.1e-33 146.7 116 69.8
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 2.1e-33 146.7 116 69.8
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.8e-32 143.7 116 65.5
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 2.3e-32 143.3 231 58.0
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 2.3e-32 143.3 231 58.0
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 9.7e-31 137.9 110 70.0
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 9.7e-31 137.9 117 66.7
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.8e-30 136.3 110 70.9
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.8e-30 136.3 110 70.9
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 3.7e-30 136.0 240 49.6
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 6.3e-30 135.2 255 52.2
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 6.3e-30 135.2 116 64.7
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 1.8e-29 133.7 101 66.3
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 1.8e-29 133.7 237 47.7
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 3.1e-29 132.9 106 67.0
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 1.2e-28 131.0 102 67.6
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 2.6e-28 129.8 118 61.9
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.5e-28 129.0 110 67.3
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 4.5e-28 129.0 245 58.8
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 7.7e-28 128.3 114 61.4
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.3e-27 127.5 116 61.2
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 5.0e-27 125.6 142 54.2
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.1e-26 124.4 116 59.5
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 1.1e-26 124.4 101 65.3
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 1.1e-26 124.4 131 56.5
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 1.1e-26 124.4 116 59.5
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 1.4e-26 124.0 104 63.5
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 1.4e-26 124.0 104 61.5
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 2.5e-26 123.2 99 66.7
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 2.5e-26 123.2 116 57.8
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 3.2e-26 122.9 116 61.2
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 4.2e-26 122.5 104 62.5
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 9.4e-26 121.3 116 58.6
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 1.6e-25 120.6 103 61.2
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 1.0e-24 117.9 116 57.8
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.8e-24 117.1 110 64.5
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 1.8e-24 117.1 259 50.6
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 3.0e-24 116.3 106 59.4
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 3.9e-24 115.9 116 57.8
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 9.7e-23 111.3 116 53.4
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 2.2e-22 110.2 101 54.5
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 4.8e-22 109.0 117 53.8
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 1.4e-21 107.5 101 60.4
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 6.9e-21 105.1 226 60.2
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 2.0e-20 103.6 116 50.0
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 2.6e-20 103.2 119 52.9
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 2.6e-20 103.2 96 57.3
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 3.4e-20 102.8 116 51.7
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 3.4e-20 102.8 116 48.3
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 7.7e-20 101.7 116 51.7
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 1.3e-19 100.9 116 51.7
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 1.7e-19 100.5 101 53.5
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 1.7e-19 100.5 101 53.5
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 6.5e-19 98.6 100 53.0
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 8.5e-19 98.2 100 58.0
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 8.5e-19 98.2 116 50.0
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 1.4e-18 97.4 115 52.2
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 2.5e-18 96.7 116 47.4
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 3.2e-18 96.3 99 54.5
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 5.5e-18 95.5 116 48.3
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 5.5e-18 95.5 116 51.7
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 5.5e-18 95.5 117 49.6
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 9.4e-18 94.7 116 50.9
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 1.6e-17 94.0 116 47.4
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 1.6e-17 94.0 116 47.4
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 3.6e-17 92.8 101 50.5
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 3.6e-17 92.8 100 49.0
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 3.6e-17 92.8 116 48.3
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 4.7e-17 92.4 112 48.2
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.0e-16 91.3 116 50.0
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 1.4e-16 90.9 118 50.0
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 1.4e-16 90.9 116 50.0
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 1.8e-16 90.5 87 59.8
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 2.3e-16 90.1 246 53.7
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 2.3e-16 90.1 116 45.7
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 3.9e-16 89.4 116 49.1
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 5.1e-16 89.0 116 47.4
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 6.7e-16 88.6 115 46.1
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 6.7e-16 88.6 116 47.4
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 8.8e-16 88.2 102 47.1
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 8.8e-16 88.2 116 45.7
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 1.1e-15 87.8 75 66.7
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 1.5e-15 87.4 114 46.5
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 1.5e-15 87.4 115 49.6
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 2.6e-15 86.7 113 46.9
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 2.6e-15 86.7 95 51.6
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 2.6e-15 86.7 100 49.0
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.3e-15 86.3 115 48.7
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 5.7e-15 85.5 116 47.4
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 7.4e-15 85.1 115 47.8
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 1.7e-14 84.0 115 48.7
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.2e-14 83.6 116 46.6
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 4.8e-14 82.4 111 41.4
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 8.2e-14 81.6 68 64.7
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 1.4e-13 80.9 116 45.7
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 1.8e-13 80.5 103 43.7
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 3.1e-13 79.7 92 48.9
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 3.1e-13 79.7 78 61.5
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 4.1e-13 79.3 100 45.0
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 7.0e-13 78.6 65 64.6
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 2.6e-12 76.6 73 56.2
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 3.5e-12 76.3 116 45.7
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 3.5e-12 76.3 116 45.7
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 7.7e-12 75.1 116 42.2
MBI18_g32376_MAGBIO Magnolia biondii HOM05D006591 ORTHO05D007861 1.7e-11 73.9 51 70.6
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 1.7e-11 73.9 86 52.3
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 2.2e-11 73.6 96 40.6
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 1.5e-10 70.9 97 39.2
Actinidia22381 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.9e-10 70.5 40 85.0
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 7.2e-10 68.6 94 47.9
A07p05510 Brassica napus HOM05D006591 ORTHO05D007861 3.0e-08 63.2 55 56.4
CAN.G1340.10 Capsicum annuum HOM05D006591 ORTHO05D007861 3.0e-08 63.2 47 66.0
MBI18_g32377_MAGBIO Magnolia biondii HOM05D006591 ORTHO05D007861 4.8e-06 55.8 54 61.1


User provided reference genes

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