Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 8.5e-105 384.4 323 100.0
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 7.1e-43 178.7 318 67.9
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 9.9e-37 158.3 77 97.4
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 2.2e-36 157.1 271 76.4
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 2.8e-31 140.2 288 71.5
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 6.2e-31 139.0 307 66.4
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 7.9e-26 122.1 282 68.4
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 2.3e-25 120.6 78 67.9
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 8.7e-25 118.6 78 64.1
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.5e-24 117.9 78 65.4
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 1.9e-24 117.5 77 68.8
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 1.3e-23 114.8 78 65.4
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 3.7e-23 113.2 78 69.2
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 6.2e-23 112.5 268 71.3
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 8.2e-23 112.1 78 66.7
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 2.4e-22 110.5 77 64.9
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 2.4e-22 110.5 78 66.7
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 2.4e-22 110.5 78 66.7
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 2.4e-22 110.5 78 65.4
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 4.0e-22 109.8 94 50.0
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 4.0e-22 109.8 78 62.8
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 6.9e-22 109.0 78 66.7
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 9.0e-22 108.6 78 64.1
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 1.2e-21 108.2 78 62.8
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 1.5e-21 107.8 78 65.4
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 1.5e-21 107.8 78 62.8
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 1.5e-21 107.8 77 61.0
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 1.5e-21 107.8 77 61.0
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 2.0e-21 107.5 76 64.5
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 2.6e-21 107.1 270 69.6
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 2.6e-21 107.1 78 61.5
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 4.5e-21 106.3 78 57.7
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 5.8e-21 105.9 262 69.8
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 7.6e-21 105.5 78 60.3
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 1.3e-20 104.8 78 59.0
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 1.7e-20 104.4 78 59.0
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 2.2e-20 104.0 78 60.3
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 2.2e-20 104.0 78 60.3
Rhsim07G0038700 Rhododendron simsii HOM05D001455 ORTHO05D002670 2.2e-20 104.0 140 38.6
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 2.2e-20 104.0 76 61.8
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 2.9e-20 103.6 78 60.3
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 3.8e-20 103.2 78 57.7
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 3.8e-20 103.2 95 50.5
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 4.9e-20 102.8 78 61.5
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 6.5e-20 102.4 74 59.5
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 8.4e-20 102.1 78 57.7
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 8.4e-20 102.1 70 68.6
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 1.1e-19 101.7 78 59.0
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 1.4e-19 101.3 77 58.4
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 1.4e-19 101.3 78 60.3
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 1.9e-19 100.9 262 67.9
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 2.5e-19 100.5 78 60.3
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 3.2e-19 100.1 77 57.1
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 5.5e-19 99.4 74 60.8
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 1.2e-18 98.2 78 57.7
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 2.1e-18 97.4 68 66.2
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 2.1e-18 97.4 77 55.8
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 2.7e-18 97.1 78 57.7
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 2.7e-18 97.1 78 59.0
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 4.6e-18 96.3 78 56.4
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 1.0e-17 95.1 78 57.7
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 1.0e-17 95.1 78 61.5
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 1.3e-17 94.7 78 53.8
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 2.3e-17 94.0 78 53.8
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 3.0e-17 93.6 77 54.5
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 3.9e-17 93.2 70 60.0
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 1.5e-16 91.3 78 51.3
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 1.5e-16 91.3 65 63.1
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 1.9e-16 90.9 78 52.6
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 2.5e-16 90.5 77 54.5
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 3.3e-16 90.1 70 55.7
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 1.6e-15 87.8 78 52.6
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 2.2e-15 87.4 74 52.7
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 2.2e-15 87.4 74 52.7
Zm00001eb224150 Zea mays HOM05D011046 ORTHO05D013342 6.3e-15 85.9 78 51.3
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 2.4e-14 84.0 78 48.7
Zm00001eb272070 Zea mays HOM05D011046 ORTHO05D013342 4.1e-14 83.2 83 48.2
Zm00001eb324030 Zea mays HOM05D011046 ORTHO05D013342 4.1e-14 83.2 83 48.2
Zm00001eb336430 Zea mays HOM05D011046 ORTHO05D013342 4.1e-14 83.2 83 48.2
Zm00001eb427360 Zea mays HOM05D011046 ORTHO05D013342 4.1e-14 83.2 83 48.2
Zm00001eb442860 Zea mays HOM05D011046 ORTHO05D013342 4.1e-14 83.2 83 48.2
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 9.0e-14 82.0 85 48.2
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 9.0e-14 82.0 299 57.9
Zm00001eb059330 Zea mays HOM05D011046 ORTHO05D013342 9.0e-14 82.0 77 49.4
Zm00001eb121340 Zea mays HOM05D011046 ORTHO05D013342 9.0e-14 82.0 77 49.4
Zm00001eb398710 Zea mays HOM05D011046 ORTHO05D013342 9.0e-14 82.0 77 49.4
Zm00001eb191870 Zea mays HOM05D011046 ORTHO05D013342 2.6e-13 80.5 77 48.1
Zm00001eb210080 Zea mays HOM05D011046 ORTHO05D013342 3.8e-12 76.6 71 49.3
Zm00001eb367370 Zea mays HOM05D011046 ORTHO05D013342 3.8e-12 76.6 71 49.3
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 3.2e-11 73.6 56 55.4
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 4.6e-10 69.7 70 48.6
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 1.8e-09 67.8 41 73.2
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 8.8e-09 65.5 60 50.0
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 2.5e-08 63.9 68 45.6
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 1.3e-07 61.6 41 65.9
Eucgr.D01185 Eucalyptus grandis HOM05D007595 ORTHO05D009570 9.1e-06 55.5 43 58.1


User provided reference genes

Program Settings