Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g11730 Coffea canephora HOM05D004533 ORTHO05D005347 9.7e-162 573.5 316 100.0
QL03p073504 Quercus lobata HOM05D004533 ORTHO05D005347 1.7e-73 280.4 327 59.0
Haze_11876 Corylus avellana HOM05D004533 ORTHO05D005347 2.1e-71 273.5 331 58.0
Gohir.A13G084500 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.7e-71 273.1 332 56.9
Gohir.D13G084000 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.5e-71 272.7 332 56.9
Gorai.013G095800 Gossypium raimondii HOM05D004533 ORTHO05D005347 3.5e-71 272.7 332 56.9
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.9e-70 269.2 328 52.1
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 3.3e-69 266.2 335 55.8
Manes.01G025900 Manihot esculenta HOM05D004533 ORTHO05D005347 9.6e-69 264.6 331 55.0
Duzib251G0596 Durio zibethinus HOM05D004533 ORTHO05D005347 1.3e-68 264.2 335 55.2
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.4e-67 260.0 328 56.1
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 2.6e-66 256.5 333 55.6
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 7.6e-66 255.0 336 51.2
Dinv20147 Davidia involucrata HOM05D004533 ORTHO05D005347 2.2e-65 253.4 315 59.0
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 4.2e-64 249.2 326 54.9
Sabra10G0118800 Salix brachista HOM05D004533 ORTHO05D005347 2.1e-63 246.9 337 55.8
TAR629G1049 Trochodendron aralioides HOM05D004533 ORTHO05D005347 2.3e-62 243.4 331 49.2
Cfa008857 Carpinus fangiana HOM05D004533 ORTHO05D005347 4.8e-60 235.7 333 54.1
Manes.05G112100 Manihot esculenta HOM05D004533 ORTHO05D005347 4.8e-60 235.7 331 51.7
Oeu048133.1 Olea europaea HOM05D004533 ORTHO05D005347 1.4e-59 234.2 308 56.8
Oeu048134.1 Olea europaea HOM05D004533 ORTHO05D005347 1.4e-59 234.2 308 56.8
CiPaw.05G123000 Carya illinoinensis HOM05D004533 ORTHO05D005347 4.1e-59 232.6 334 52.4
Lalb_Chr10g0099071 Lupinus albus HOM05D004533 ORTHO05D005347 9.0e-59 231.5 328 52.1
Dinv34043 Davidia involucrata HOM05D004533 ORTHO05D005347 1.2e-58 231.1 312 56.7
Lalb_Chr17g0341371 Lupinus albus HOM05D004533 ORTHO05D005347 1.5e-58 230.7 325 52.9
Rhsim09G0125000 Rhododendron simsii HOM05D004533 ORTHO05D005347 2.6e-58 229.9 320 55.6
Potri.010G154200 Populus trichocarpa HOM05D004533 ORTHO05D005347 4.5e-58 229.2 337 51.3
Gorai.008G175700 Gossypium raimondii HOM05D004533 ORTHO05D005347 2.2e-57 226.9 305 49.8
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 4.2e-56 222.6 333 52.3
Phvul.003G039500 Phaseolus vulgaris HOM05D004533 ORTHO05D005347 5.5e-56 222.2 350 51.1
Lj2g0015000 Lotus japonicus HOM05D004533 ORTHO05D005347 2.1e-55 220.3 327 51.7
TAR371G0131 Trochodendron aralioides HOM05D004533 ORTHO05D005347 3.5e-55 219.5 313 54.0
Nn4g23503 Nelumbo nucifera HOM05D004533 ORTHO05D005347 1.3e-54 217.6 341 48.1
MSTRG.2297 Avicennia marina HOM05D004533 ORTHO05D005347 1.5e-53 214.2 341 42.8
Oeu020361.1 Olea europaea HOM05D004533 ORTHO05D005347 1.9e-53 213.8 298 48.7
TAR374G1471 Trochodendron aralioides HOM05D004533 ORTHO05D005347 1.9e-53 213.8 264 49.6
CSS0048067 Camellia sinensis var. sinensis HOM05D004533 ORTHO05D005347 5.7e-53 212.2 320 52.8
Gohir.D12G163100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 7.4e-53 211.8 302 54.0
Hma1.2p1_3075F.1_g332390 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 1.3e-52 211.1 327 46.2
Potri.008G098200 Populus trichocarpa HOM05D004533 ORTHO05D005347 6.3e-52 208.8 336 49.4
Gohir.A12G159800 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.4e-51 206.8 303 53.1
Hma1.2p1_0428F.1_g151070 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 1.2e-50 204.5 276 48.9
Peaxi162Scf00175g00062 Petunia axillaris HOM05D004533 ORTHO05D005347 2.0e-50 203.8 346 45.1
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 2.0e-50 203.8 305 51.1
vmacro01308 Vaccinium macrocarpon HOM05D004533 ORTHO05D005347 2.0e-50 203.8 320 47.5
Rhsim12G0073600 Rhododendron simsii HOM05D004533 ORTHO05D005347 2.6e-50 203.4 325 48.0
Glyma.01G063800 Glycine max HOM05D004533 ORTHO05D005347 4.5e-50 202.6 359 46.2
CiPaw.06G093700 Carya illinoinensis HOM05D004533 ORTHO05D005347 5.9e-50 202.2 339 50.4
Aqoxy3G03701 Aquilegia oxysepala HOM05D004533 ORTHO05D005347 1.3e-49 201.1 337 48.4
Oeu028724.1 Olea europaea HOM05D004533 ORTHO05D005347 1.3e-49 201.1 311 45.0
Hma1.2p1_0473F.1_g160260 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 3.8e-49 199.5 319 44.8
TPR.G38582 Trifolium pratense HOM05D004533 ORTHO05D005347 5.5e-48 195.7 312 50.3
Eucgr.B03139 Eucalyptus grandis HOM05D004533 ORTHO05D005347 7.2e-48 195.3 346 48.3
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 9.4e-48 194.9 305 51.1
COL.COLO4_27845 Corchorus olitorius HOM05D004533 ORTHO05D005347 1.2e-47 194.5 350 47.4
Ca_05043_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 2.7e-47 193.4 303 53.1
Ca_19594_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 2.7e-47 193.4 303 53.1
Actinidia26533 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.4e-46 191.0 311 51.4
Sabra08G0074200 Salix brachista HOM05D004533 ORTHO05D005347 5.1e-46 189.1 322 48.8
MSTRG.13457 Avicennia marina HOM05D004533 ORTHO05D005347 2.5e-45 186.8 321 50.2
ECA233G1177 Erigeron canadensis HOM05D004533 ORTHO05D005347 9.7e-45 184.9 329 48.6
Prupe.1G290400 Prunus persica HOM05D004533 ORTHO05D005347 2.2e-44 183.7 353 46.7
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 4.8e-44 182.6 347 48.4
TWI75G1153 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 1.4e-43 181.0 311 46.9
Nitab4.5_0006154g0010 Nicotiana tabacum HOM05D004533 ORTHO05D005347 2.4e-43 180.3 317 47.9
TWI79G0987 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 4.1e-43 179.5 318 49.7
Atru.chr11.1592 Acer truncatum HOM05D004533 ORTHO05D005347 1.5e-42 177.6 330 47.6
MSTRG.7732 Avicennia marina HOM05D004533 ORTHO05D005347 3.4e-42 176.4 319 46.4
Glyma.02G121400 Glycine max HOM05D004533 ORTHO05D005347 2.2e-41 173.7 359 43.2
Nitab4.5_0000027g0050 Nicotiana tabacum HOM05D004533 ORTHO05D005347 1.1e-40 171.4 320 48.1
Actinidia19907 Actinidia chinensis HOM05D004533 ORTHO05D005347 2.5e-40 170.2 293 50.9
MD16G1058700 Malus domestica HOM05D004533 ORTHO05D005347 4.2e-40 169.5 336 44.0
Sed0020971 Sechium edule HOM05D004533 ORTHO05D005347 7.2e-40 168.7 329 38.9
Solyc05g012030.1 Solanum lycopersicum HOM05D004533 ORTHO05D005347 4.7e-39 166.0 324 47.2
TWI31G0640 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 7.9e-39 165.2 318 46.2
PSO017G3527 Papaver somniferum HOM05D004533 ORTHO05D005347 1.0e-38 164.9 352 39.5
PSO478G4496 Papaver somniferum HOM05D004533 ORTHO05D005347 1.4e-38 164.5 353 39.4
Actinidia16147 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.1e-37 161.4 225 57.3
Lsat_1_v5_gn_4_11700 Lactuca sativa HOM05D004533 ORTHO05D005347 1.1e-37 161.4 336 45.5
Lsat_1_v5_gn_8_45920 Lactuca sativa HOM05D004533 ORTHO05D005347 1.1e-37 161.4 336 44.3
MD13G1059400 Malus domestica HOM05D004533 ORTHO05D005347 3.3e-37 159.8 345 41.2
VMungo1215G1442 Vigna mungo HOM05D004533 ORTHO05D005347 7.4e-37 158.7 208 58.7
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 4.8e-36 156.0 329 40.7
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 4.8e-36 156.0 329 40.7
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 4.8e-36 156.0 329 40.7
MELO3C011411.2 Cucumis melo HOM05D004533 ORTHO05D005347 1.1e-35 154.8 340 38.5
HanXRQChr12g0363201 Helianthus annuus HOM05D004533 ORTHO05D005347 2.4e-35 153.7 331 44.1
DCAR_023748 Daucus carota HOM05D004533 ORTHO05D005347 4.1e-35 152.9 333 41.7
Sc11g0002570 Simmondsia chinensis HOM05D004533 ORTHO05D005347 5.3e-35 152.5 325 46.8
ClCG08G010520 Citrullus lanatus HOM05D004533 ORTHO05D005347 7.0e-35 152.1 333 37.8
ECA234G4159 Erigeron canadensis HOM05D004533 ORTHO05D005347 1.2e-34 151.4 330 41.2
CsaV3_6G033770 Cucumis sativus L. HOM05D004533 ORTHO05D005347 4.5e-34 149.4 344 36.9
PGSC0003DMG400028307 Solanum tuberosum HOM05D004533 ORTHO05D005347 1.7e-33 147.5 338 38.8
Lj6P776T6 Lonicera japonica HOM05D004533 ORTHO05D005347 2.2e-33 147.1 184 50.0
EL10Ac6g15027 Beta vulgaris HOM05D004533 ORTHO05D005347 1.1e-32 144.8 226 42.9
FAN07G1881 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.5e-32 144.4 339 44.2
DCAR_026684 Daucus carota HOM05D004533 ORTHO05D005347 1.9e-32 144.1 349 37.8
arahy.Tifrunner.gnm1.ann1.PV72KB Arachis hypogaea HOM05D004533 ORTHO05D005347 5.5e-32 142.5 372 40.9
FAN22G0793 Fragaria x ananassa HOM05D004533 ORTHO05D005347 9.4e-32 141.7 338 44.1
Ah.03g138730 Amaranthus hybridus HOM05D004533 ORTHO05D005347 1.2e-31 141.4 330 39.1
ClCG05G023610 Citrullus lanatus HOM05D004533 ORTHO05D005347 1.6e-31 141.0 322 40.7
Sopen05g006810 Solanum pennellii HOM05D004533 ORTHO05D005347 1.6e-31 141.0 259 50.6
DCAR_030051 Daucus carota HOM05D004533 ORTHO05D005347 2.7e-31 140.2 330 37.3
FvH4_4g29630 Fragaria vesca HOM05D004533 ORTHO05D005347 2.7e-31 140.2 338 44.1
FAN12G3098 Fragaria x ananassa HOM05D004533 ORTHO05D005347 2.7e-31 140.2 338 44.1
CsaV3_5G033410 Cucumis sativus L. HOM05D004533 ORTHO05D005347 4.7e-31 139.4 317 37.2
Actinidia13399 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.4e-30 137.9 227 55.1
FAN17G0049 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.4e-30 137.9 339 43.7
MBI16_g39936_MAGBIO Magnolia biondii HOM05D004533 ORTHO05D005347 2.3e-30 137.1 313 39.3
arahy.Tifrunner.gnm1.ann1.NK9Z7F Arachis hypogaea HOM05D004533 ORTHO05D005347 5.2e-30 136.0 354 40.7
RcHm_v2.0_Chr4g0437861 Rosa chinensis HOM05D004533 ORTHO05D005347 5.7e-29 132.5 342 42.1
Sed0009680 Sechium edule HOM05D004533 ORTHO05D005347 7.4e-29 132.1 307 36.2
SGA_v2.0_scaffold287G47174 Striga asiatica HOM05D004533 ORTHO05D005347 1.3e-28 131.3 326 38.7
MELO3C012160.2 Cucumis melo HOM05D004533 ORTHO05D005347 3.7e-28 129.8 317 36.0
Ah.02g126770 Amaranthus hybridus HOM05D004533 ORTHO05D005347 1.1e-27 128.3 334 36.8
Nn3g17512 Nelumbo nucifera HOM05D004533 ORTHO05D005347 1.8e-27 127.5 312 40.1
ATR0827G049 Amborella trichopoda HOM05D004533 ORTHO05D005347 4.1e-27 126.3 308 37.0
Carub.0002s1576 Capsella rubella HOM05D004533 ORTHO05D005347 5.9e-26 122.5 324 34.3
THA.LOC104821996 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 1.1e-24 118.2 325 39.7
Sp5g24200 Schrenkiella parvula HOM05D004533 ORTHO05D005347 2.1e-23 114.0 326 34.4
DCAR_007202 Daucus carota HOM05D004533 ORTHO05D005347 8.0e-23 112.1 311 37.0
AL2G28250 Arabidopsis lyrata HOM05D004533 ORTHO05D005347 3.0e-22 110.2 331 35.3
AT1G69160 Arabidopsis thaliana HOM05D004533 ORTHO05D005347 6.8e-22 109.0 316 34.2
BcaB03g15876 Brassica carinata HOM05D004533 ORTHO05D005347 8.8e-22 108.6 328 35.1
A07p35490 Brassica napus HOM05D004533 ORTHO05D005347 8.8e-22 108.6 330 33.9
Aa31LG4G11830 Aethionema arabicum HOM05D004533 ORTHO05D005347 1.2e-21 108.2 285 40.0
C06p40740 Brassica napus HOM05D004533 ORTHO05D005347 1.5e-21 107.8 328 32.9
BcaC08g46370 Brassica carinata HOM05D004533 ORTHO05D005347 2.0e-21 107.5 320 34.7
BolC6t39358H Brassica oleracea HOM05D004533 ORTHO05D005347 2.0e-21 107.5 320 34.7
BraA07t31139Z Brassica rapa HOM05D004533 ORTHO05D005347 2.0e-21 107.5 330 33.6
BraA02t06624Z Brassica rapa HOM05D004533 ORTHO05D005347 2.6e-21 107.1 327 33.6
Thhalv10018878m.g Eutrema salsugineum HOM05D004533 ORTHO05D005347 2.8e-20 103.6 316 33.5
Sc04g0007440 Simmondsia chinensis HOM05D004533 ORTHO05D005347 1.1e-19 101.7 308 40.9
C02p26000 Brassica napus HOM05D004533 ORTHO05D005347 1.4e-19 101.3 329 33.1
CARHR062030 Cardamine hirsuta HOM05D004533 ORTHO05D005347 3.1e-19 100.1 331 34.1
A02p15640 Brassica napus HOM05D004533 ORTHO05D005347 5.4e-19 99.4 327 33.0
BolC2t08676H Brassica oleracea HOM05D004533 ORTHO05D005347 5.4e-19 99.4 329 32.2
PSO782G4709 Papaver somniferum HOM05D004533 ORTHO05D005347 5.9e-18 95.9 328 34.8
BcaC03g15057 Brassica carinata HOM05D004533 ORTHO05D005347 1.0e-17 95.1 329 31.9
PSO063G5982 Papaver somniferum HOM05D004533 ORTHO05D005347 3.8e-17 93.2 315 32.1
Migut.E00039 Erythranthe guttata HOM05D004533 ORTHO05D005347 1.5e-16 91.3 298 36.6
CDE02G4104 Ceratophyllum demersum HOM05D004533 ORTHO05D005347 4.2e-16 89.7 288 31.2
CANSAT64G2295 Cannabis sativa HOM05D004533 ORTHO05D005347 2.1e-15 87.4 393 34.6
PGR102G1315 Punica granatum HOM05D004533 ORTHO05D005347 2.1e-15 87.4 330 31.2
PGR119G0103 Punica granatum HOM05D004533 ORTHO05D005347 3.4e-13 80.1 329 36.5
BcaC08g45911 Brassica carinata HOM05D004533 ORTHO05D005347 3.7e-12 76.6 252 27.8
BcaC08g45912 Brassica carinata HOM05D004533 ORTHO05D005347 3.7e-12 76.6 253 27.7
Migut.L01171 Erythranthe guttata HOM05D004533 ORTHO05D005347 1.8e-11 74.3 163 38.0
TAR381G0317 Trochodendron aralioides HOM05D004533 ORTHO05D005347 1.2e-07 61.6 106 41.5
TAR627G0820 Trochodendron aralioides HOM05D004533 ORTHO05D005347 2.8e-07 60.5 104 43.3
BcaC08g45913 Brassica carinata HOM05D004533 ORTHO05D005347 3.6e-07 60.1 305 25.2
GSVIVG01012248001 Vitis vinifera HOM05D004533 ORTHO05D005347 4.0e-06 56.6 46 58.7
unitig_22.g5564 Utricularia gibba HOM05D004533 ORTHO05D005347 5.2e-06 56.2 290 28.6


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