Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g11680 Coffea canephora HOM05D008780 ORTHO05D010894 1.9e-62 242.3 120 100.0
PGSC0003DMG400021889 Solanum tuberosum HOM05D008780 ORTHO05D010894 7.2e-33 144.1 120 59.2
SalBow1G8003 Salvia bowleyana HOM05D008780 ORTHO05D010894 1.6e-32 142.9 121 63.6
Nitab4.5_0001118g0100 Nicotiana tabacum HOM05D008780 ORTHO05D010894 2.1e-32 142.5 120 61.7
Solyc01g010230.2 Solanum lycopersicum HOM05D008780 ORTHO05D010894 3.6e-32 141.7 118 58.5
Sopen01g005830 Solanum pennellii HOM05D008780 ORTHO05D010894 3.6e-32 141.7 118 58.5
SalBow2G0298 Salvia bowleyana HOM05D008780 ORTHO05D010894 6.1e-32 141.0 121 62.8
Oeu057412.1 Olea europaea HOM05D008780 ORTHO05D010894 3.9e-31 138.3 122 59.0
MSTRG.774 Avicennia marina HOM05D008780 ORTHO05D010894 4.4e-30 134.8 123 56.9
Migut.L01168 Erythranthe guttata HOM05D008780 ORTHO05D010894 1.5e-25 119.8 128 53.9
Nitab4.5_0000509g0060 Nicotiana tabacum HOM05D008780 ORTHO05D010894 8.0e-24 114.0 95 62.1
Actinidia16144 Actinidia chinensis HOM05D008780 ORTHO05D010894 1.4e-20 103.2 115 49.6
Dinv34033 Davidia involucrata HOM05D008780 ORTHO05D010894 1.4e-20 103.2 92 63.0
TAR622G0759 Trochodendron aralioides HOM05D008780 ORTHO05D010894 5.3e-20 101.3 109 48.6
Cc11_g11660 Coffea canephora HOM05D008780 ORTHO05D010894 7.7e-19 97.4 112 42.9
Rhsim09G0124100 Rhododendron simsii HOM05D008780 ORTHO05D010894 1.3e-18 96.7 110 46.4
Dinv20142 Davidia involucrata HOM05D008780 ORTHO05D010894 2.9e-18 95.5 89 60.7
DCAR_023743 Daucus carota HOM05D008780 ORTHO05D010894 8.5e-18 94.0 93 46.2
DCAR_023744 Daucus carota HOM05D008780 ORTHO05D010894 8.5e-18 94.0 109 46.8
DCAR_023868 Daucus carota HOM05D008780 ORTHO05D010894 1.9e-17 92.8 93 46.2
RhsimUnG0149900 Rhododendron simsii HOM05D008780 ORTHO05D010894 3.2e-17 92.0 90 51.1
PGSC0003DMG400028397 Solanum tuberosum HOM05D008780 ORTHO05D010894 4.2e-17 91.7 122 37.7
Nitab4.5_0000027g0160 Nicotiana tabacum HOM05D008780 ORTHO05D010894 2.1e-16 89.4 115 41.7
TAR721G0001 Trochodendron aralioides HOM05D008780 ORTHO05D010894 1.0e-15 87.0 109 47.7
Rhsim09G0123600 Rhododendron simsii HOM05D008780 ORTHO05D010894 1.4e-15 86.7 114 49.1
RhsimUnG0149600 Rhododendron simsii HOM05D008780 ORTHO05D010894 1.4e-15 86.7 114 48.2
Sc23g0005060 Simmondsia chinensis HOM05D008780 ORTHO05D010894 1.4e-15 86.7 104 51.9
vmacro10444 Vaccinium macrocarpon HOM05D008780 ORTHO05D010894 2.8e-13 79.0 114 47.4
Hma1.2p1_0473F.1_g160220 Hydrangea macrophylla HOM05D008780 ORTHO05D010894 1.8e-12 76.3 137 35.8
Zm00001eb108780 Zea mays HOM05D008780 ORTHO05D010894 1.8e-12 76.3 106 43.4
Hma1.2p1_0473F.1_g160210 Hydrangea macrophylla HOM05D008780 ORTHO05D010894 8.6e-10 67.4 106 38.7
Lsat_1_v5_gn_4_24960 Lactuca sativa HOM05D008780 ORTHO05D010894 4.2e-09 65.1 122 34.4
Peaxi162Scf00175g00101 Petunia axillaris HOM05D015166 ORTHO05D015285 9.5e-09 63.9 135 34.1
Cc11_g11670 Coffea canephora HOM05D008780 ORTHO05D010894 1.6e-08 63.2 115 34.8
Rhsim09G0123900 Rhododendron simsii HOM05D008780 ORTHO05D010894 4.7e-08 61.6 90 44.4
Rhsim09G0124500 Rhododendron simsii HOM05D008780 ORTHO05D010894 4.7e-08 61.6 117 41.0
Lsat_1_v5_gn_4_25000 Lactuca sativa HOM05D008780 ORTHO05D010894 8.0e-08 60.8 95 34.7
EL10Ac6g14689 Beta vulgaris HOM05D024733 ORTHO05D017492 1.4e-07 60.1 140 33.6
EL10Ac6g14692 Beta vulgaris HOM05D024733 ORTHO05D017492 8.9e-07 57.4 142 31.7
Rhsim09G0124000 Rhododendron simsii HOM05D008780 ORTHO05D010894 1.2e-06 57.0 131 35.9
Potri.019G129820 Populus trichocarpa HOM05D014906 ORTHO05D015588 5.7e-06 54.7 60 53.3
Nitab4.5_0000027g0150 Nicotiana tabacum HOM05D015166 ORTHO05D015285 7.5e-06 54.3 156 30.1
Nitab4.5_0006082g0010 Nicotiana tabacum HOM05D015166 ORTHO05D015285 7.5e-06 54.3 137 32.8
RhsimUnG0149700 Rhododendron simsii HOM05D008780 ORTHO05D010894 9.8e-06 53.9 122 36.1


User provided reference genes

Program Settings