Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g11660 Coffea canephora HOM05D008780 ORTHO05D010894 2.0e-83 312.4 154 100.0
TAR622G0759 Trochodendron aralioides HOM05D008780 ORTHO05D010894 1.6e-24 116.7 112 46.4
Actinidia16144 Actinidia chinensis HOM05D008780 ORTHO05D010894 1.3e-21 107.1 129 43.4
Cc11_g11670 Coffea canephora HOM05D008780 ORTHO05D010894 1.6e-21 106.7 119 54.6
TAR721G0001 Trochodendron aralioides HOM05D008780 ORTHO05D010894 8.1e-21 104.4 112 42.0
Rhsim09G0124100 Rhododendron simsii HOM05D008780 ORTHO05D010894 1.5e-19 100.1 114 43.0
RhsimUnG0149600 Rhododendron simsii HOM05D008780 ORTHO05D010894 1.3e-18 97.1 143 39.9
Cc11_g11680 Coffea canephora HOM05D008780 ORTHO05D010894 1.7e-18 96.7 112 42.9
Dinv34033 Davidia involucrata HOM05D008780 ORTHO05D010894 2.2e-18 96.3 93 50.5
Rhsim09G0123600 Rhododendron simsii HOM05D008780 ORTHO05D010894 3.2e-17 92.4 149 37.6
SalBow1G8003 Salvia bowleyana HOM05D008780 ORTHO05D010894 2.1e-16 89.7 113 39.8
Solyc01g010230.2 Solanum lycopersicum HOM05D008780 ORTHO05D010894 2.1e-16 89.7 112 37.5
Sopen01g005830 Solanum pennellii HOM05D008780 ORTHO05D010894 2.1e-16 89.7 112 37.5
Hma1.2p1_0473F.1_g160220 Hydrangea macrophylla HOM05D008780 ORTHO05D010894 4.6e-16 88.6 139 33.8
Nitab4.5_0001118g0100 Nicotiana tabacum HOM05D008780 ORTHO05D010894 4.6e-16 88.6 114 39.5
PGSC0003DMG400021889 Solanum tuberosum HOM05D008780 ORTHO05D010894 4.6e-16 88.6 117 36.8
SalBow2G0298 Salvia bowleyana HOM05D008780 ORTHO05D010894 7.9e-16 87.8 113 38.9
Hma1.2p1_0473F.1_g160210 Hydrangea macrophylla HOM05D008780 ORTHO05D010894 1.0e-15 87.4 107 39.3
Oeu057412.1 Olea europaea HOM05D008780 ORTHO05D010894 1.3e-15 87.0 115 41.7
Migut.L01168 Erythranthe guttata HOM05D008780 ORTHO05D010894 5.1e-15 85.1 120 37.5
Dinv20142 Davidia involucrata HOM05D008780 ORTHO05D010894 8.7e-15 84.3 100 43.0
DCAR_023744 Daucus carota HOM05D008780 ORTHO05D010894 3.3e-14 82.4 110 38.2
RhsimUnG0149900 Rhododendron simsii HOM05D008780 ORTHO05D010894 3.3e-14 82.4 86 46.5
DCAR_023743 Daucus carota HOM05D008780 ORTHO05D010894 5.6e-14 81.6 91 42.9
DCAR_023868 Daucus carota HOM05D008780 ORTHO05D010894 1.6e-13 80.1 91 42.9
vmacro10444 Vaccinium macrocarpon HOM05D008780 ORTHO05D010894 1.6e-13 80.1 110 39.1
MSTRG.774 Avicennia marina HOM05D008780 ORTHO05D010894 5.3e-12 75.1 122 31.1
Sc23g0005060 Simmondsia chinensis HOM05D008780 ORTHO05D010894 1.2e-11 73.9 135 34.8
Rhsim09G0123900 Rhododendron simsii HOM05D008780 ORTHO05D010894 2.0e-11 73.2 95 38.9
Nitab4.5_0000027g0160 Nicotiana tabacum HOM05D008780 ORTHO05D010894 9.9e-11 70.9 108 36.1
Nitab4.5_0000509g0060 Nicotiana tabacum HOM05D008780 ORTHO05D010894 1.3e-10 70.5 84 39.3
Zm00001eb108780 Zea mays HOM05D008780 ORTHO05D010894 4.2e-09 65.5 88 39.8
RhsimUnG0149700 Rhododendron simsii HOM05D008780 ORTHO05D010894 9.3e-09 64.3 157 27.4
PGSC0003DMG400028397 Solanum tuberosum HOM05D008780 ORTHO05D010894 3.5e-08 62.4 123 30.1
Rhsim09G0124000 Rhododendron simsii HOM05D008780 ORTHO05D010894 7.9e-08 61.2 150 27.3
Potri.019G129532 Populus trichocarpa HOM05D014906 ORTHO05D015588 1.8e-07 60.1 66 43.9
Lsat_1_v5_gn_4_24960 Lactuca sativa HOM05D008780 ORTHO05D010894 2.3e-07 59.7 149 26.8
EL10Ac6g14692 Beta vulgaris HOM05D024733 ORTHO05D017492 5.1e-07 58.5 137 29.9
Lsat_1_v5_gn_4_25020 Lactuca sativa HOM05D024733 ORTHO05D010894 6.7e-07 58.2 121 33.1
EL10Ac6g14689 Beta vulgaris HOM05D024733 ORTHO05D017492 1.9e-06 56.6 148 29.7
Potri.019G129820 Populus trichocarpa HOM05D014906 ORTHO05D015588 2.5e-06 56.2 62 50.0


User provided reference genes

Program Settings