Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g11230 Coffea canephora HOM05D011353 ORTHO05D009956 3.3e-75 285.0 152 100.0
CAN.G184.15 Capsicum annuum HOM05D011353 ORTHO05D009802 1.6e-16 90.1 129 50.4
Oeu054579.1 Olea europaea HOM05D011353 ORTHO05D009956 7.8e-16 87.8 132 46.2
Oeu024138.1 Olea europaea HOM05D011353 ORTHO05D009956 5.0e-15 85.1 136 43.4
Peaxi162Scf00188g00068 Petunia axillaris HOM05D011353 ORTHO05D009802 3.3e-14 82.4 153 45.1
Nitab4.5_0005310g0050 Nicotiana tabacum HOM05D011353 ORTHO05D014734 9.5e-14 80.9 151 41.7
Sopen05g006040 Solanum pennellii HOM05D011353 ORTHO05D009802 1.8e-12 76.6 132 47.0
Solyc05g010270.1 Solanum lycopersicum HOM05D011353 ORTHO05D009802 4.0e-12 75.5 132 47.0
PGSC0003DMG400025096 Solanum tuberosum HOM05D011353 ORTHO05D009802 4.4e-11 72.0 133 46.6
Lsat_1_v5_gn_0_39381 Lactuca sativa HOM05D001719 ORTHO05D008373 9.8e-11 70.9 140 40.0
Sabra10G0103600 Salix brachista HOM05D018804 ORTHO05D013371 1.1e-09 67.4 130 43.1
Duzib084G1352 Durio zibethinus HOM05D008563 ORTHO05D009802 1.4e-09 67.0 156 37.8
TWI60G1323 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 4.1e-09 65.5 136 39.0
Potri.010G134800 Populus trichocarpa HOM05D018804 ORTHO05D013371 1.6e-08 63.5 150 39.3
Sabra04G0073700 Salix brachista HOM05D008889 ORTHO05D009956 2.0e-08 63.2 112 44.6
Sabra17G0089900 Salix brachista HOM05D008889 ORTHO05D009956 3.5e-08 62.4 137 39.4
Potri.008G113800 Populus trichocarpa HOM05D018804 ORTHO05D013371 4.6e-08 62.0 153 40.5
Nitab4.5_0000027g0500 Nicotiana tabacum HOM05D011353 ORTHO05D009802 5.9e-08 61.6 118 47.5
MD17G1069000 Malus domestica HOM05D008889 ORTHO05D009956 1.3e-07 60.5 126 40.5
Potri.004G108840 Populus trichocarpa HOM05D008889 ORTHO05D009956 1.3e-07 60.5 134 38.8
Sabra08G0086100 Salix brachista HOM05D018804 ORTHO05D013371 1.3e-07 60.5 116 40.5
unitig_21.g20864 Utricularia gibba HOM05D011353 ORTHO05D009956 1.3e-07 60.5 106 41.5
TPR.G15318 Trifolium pratense HOM05D008563 ORTHO05D009802 1.7e-07 60.1 71 52.1
TPR.G2004 Trifolium pratense HOM05D008563 ORTHO05D009802 1.7e-07 60.1 164 35.4
FvH4_6g45950 Fragaria vesca HOM05D008889 ORTHO05D009956 2.3e-07 59.7 119 43.7
FAN05G4365 Fragaria x ananassa HOM05D008889 ORTHO05D009956 2.3e-07 59.7 119 43.7
FAN14G5446 Fragaria x ananassa HOM05D008889 ORTHO05D009956 2.3e-07 59.7 119 43.7
Potri.017G107000 Populus trichocarpa HOM05D008889 ORTHO05D009956 2.3e-07 59.7 132 36.4
CSS0028308 Camellia sinensis var. sinensis HOM05D018052 ORTHO05D009802 3.0e-07 59.3 141 38.3
FAN02G0304 Fragaria x ananassa HOM05D008889 ORTHO05D009956 3.0e-07 59.3 119 44.5
FAN09G2052 Fragaria x ananassa HOM05D008889 ORTHO05D009956 3.0e-07 59.3 119 44.5
TWI60G1620 Tripterygium wilfordii HOM05D014692 ORTHO05D014734 3.9e-07 58.9 77 48.1
Actinidia30176 Actinidia chinensis HOM05D011353 ORTHO05D009802 8.6e-07 57.8 130 43.1
BcaB07g30061 Brassica carinata HOM05D009227 ORTHO05D009956 8.6e-07 57.8 91 41.8
Thhalv10005597m.g Eutrema salsugineum HOM05D009227 ORTHO05D009956 1.1e-06 57.4 106 42.5
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 1.1e-06 57.4 130 40.0
Thecc.03G112200 Theobroma cacao HOM05D008563 ORTHO05D009802 1.1e-06 57.4 154 35.7
Lj1g0007009 Lotus japonicus HOM05D008563 ORTHO05D009802 1.5e-06 57.0 135 39.3
Lj2g0023718 Lotus japonicus HOM05D018202 ORTHO05D020778 1.5e-06 57.0 145 37.2
Oeu048107.1 Olea europaea HOM05D026131 ORTHO05D009956 1.5e-06 57.0 150 36.7
BcaC06g33727 Brassica carinata HOM05D009227 ORTHO05D009956 1.9e-06 56.6 109 38.5
A06p39660 Brassica napus HOM05D009227 ORTHO05D009956 1.9e-06 56.6 109 38.5
C07p38630 Brassica napus HOM05D009227 ORTHO05D009956 1.9e-06 56.6 109 38.5
BolC7t44384H Brassica oleracea HOM05D009227 ORTHO05D009956 1.9e-06 56.6 109 38.5
BraA06t26881Z Brassica rapa HOM05D009227 ORTHO05D009956 1.9e-06 56.6 109 38.5
Sed0005169 Sechium edule HOM05D008563 ORTHO05D009802 1.9e-06 56.6 150 38.0
Migut.E00267 Erythranthe guttata HOM05D011353 ORTHO05D009956 2.5e-06 56.2 164 37.8
Gohir.A13G093400 Gossypium hirsutum HOM05D018013 ORTHO05D013371 2.5e-06 56.2 71 49.3
RcHm_v2.0_Chr2g0164181 Rosa chinensis HOM05D008889 ORTHO05D009956 2.5e-06 56.2 115 40.0
Dinv16571 Davidia involucrata HOM05D017299 ORTHO05D009802 3.3e-06 55.8 153 37.9
ECA246G0644 Erigeron canadensis HOM05D009227 ORTHO05D009956 3.3e-06 55.8 117 41.0
Sed0012187 Sechium edule HOM05D008563 ORTHO05D009802 4.3e-06 55.5 151 35.1
CSS0016849 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 5.6e-06 55.1 135 34.1
FAN17G2419 Fragaria x ananassa HOM05D014692 ORTHO05D014734 5.6e-06 55.1 140 34.3
Manes.01G105700 Manihot esculenta HOM05D008889 ORTHO05D009956 5.6e-06 55.1 150 36.0
Nitab4.5_0010998g0060 Nicotiana tabacum HOM05D011353 ORTHO05D009802 5.6e-06 55.1 119 40.3
VMungo1309G1047 Vigna mungo HOM05D008563 ORTHO05D009802 5.6e-06 55.1 83 45.8
MSTRG.13480 Avicennia marina HOM05D026131 ORTHO05D031628 7.3e-06 54.7 144 38.2
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 7.3e-06 54.7 130 39.2
Phvul.008G023501 Phaseolus vulgaris HOM05D008889 ORTHO05D009956 9.5e-06 54.3 124 37.1


User provided reference genes

Program Settings