Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g10990 Coffea canephora HOM05D007408 ORTHO05D009325 1.9e-89 332.4 162 100.0
Oeu024124.1 Olea europaea HOM05D007408 ORTHO05D009325 2.9e-37 159.1 153 52.3
SalBow8G1270 Salvia bowleyana HOM05D007408 ORTHO05D009325 3.1e-31 139.0 158 49.4
SalBow8G3082 Salvia bowleyana HOM05D007408 ORTHO05D009325 3.1e-31 139.0 158 49.4
Glyma.16G099500 Glycine max HOM05D007408 ORTHO05D009325 1.3e-29 133.7 156 48.7
Manes.06G075900 Manihot esculenta HOM05D007408 ORTHO05D009325 1.1e-28 130.6 155 49.7
CiPaw.06G098200 Carya illinoinensis HOM05D007408 ORTHO05D009325 3.2e-28 129.0 163 46.6
SGA_v2.0_scaffold36G14509 Striga asiatica HOM05D007408 ORTHO05D009325 9.4e-28 127.5 153 47.1
Solyc05g010130.1 Solanum lycopersicum HOM05D007408 ORTHO05D009325 4.7e-27 125.2 158 46.2
Potri.008G111500 Populus trichocarpa HOM05D007408 ORTHO05D009325 1.0e-26 124.0 146 46.6
CANSAT64G2960 Cannabis sativa HOM05D007408 ORTHO05D009325 1.4e-26 123.6 171 46.2
Migut.L01119 Erythranthe guttata HOM05D007408 ORTHO05D009325 2.3e-26 122.9 163 47.9
Sabra08G0084200 Salix brachista HOM05D007408 ORTHO05D009325 3.0e-26 122.5 129 51.9
Cfa008792 Carpinus fangiana HOM05D007408 ORTHO05D009325 1.5e-25 120.2 164 49.4
Phvul.003G281600 Phaseolus vulgaris HOM05D007408 ORTHO05D009325 1.5e-25 120.2 162 46.3
Eucgr.B03072 Eucalyptus grandis HOM05D007408 ORTHO05D009325 2.8e-24 115.9 155 45.8
Atru.chr11.1432 Acer truncatum HOM05D007408 ORTHO05D009325 3.7e-24 115.5 157 46.5
DCAR_026703 Daucus carota HOM05D002818 ORTHO05D003244 1.1e-23 114.0 131 50.4
MD13G1050800 Malus domestica HOM05D007408 ORTHO05D009325 1.4e-23 113.6 150 49.3
VMungo0251G2162 Vigna mungo HOM05D007408 ORTHO05D009325 1.2e-22 110.5 154 46.8
Cpa.g.sc1.248 Carica papaya HOM05D007408 ORTHO05D009325 2.0e-22 109.8 153 46.4
Lalb_Chr20g0122411 Lupinus albus HOM05D007408 ORTHO05D009325 1.0e-21 107.5 159 43.4
TWI79G0837 Tripterygium wilfordii HOM05D007408 ORTHO05D009325 1.7e-21 106.7 154 43.5
Prupe.1G301300 Prunus persica HOM05D007408 ORTHO05D009325 2.2e-21 106.3 158 44.9
RcHm_v2.0_Chr4g0436431 Rosa chinensis HOM05D007408 ORTHO05D009325 2.2e-21 106.3 153 45.1
Thecc.02G364900 Theobroma cacao HOM05D007408 ORTHO05D009325 5.0e-21 105.1 122 50.8
TAR629G0610 Trochodendron aralioides HOM05D007408 ORTHO05D009325 5.0e-21 105.1 154 42.9
PGR119G0146 Punica granatum HOM05D007408 ORTHO05D009325 6.5e-21 104.8 164 43.3
Haze_11804 Corylus avellana HOM05D007408 ORTHO05D009325 2.5e-20 102.8 121 52.1
FAN07G2148 Fragaria x ananassa HOM05D000085 ORTHO05D000274 2.5e-20 102.8 136 47.1
FAN17G1226 Fragaria x ananassa HOM05D000085 ORTHO05D000274 2.5e-20 102.8 136 47.1
FAN22G2286 Fragaria x ananassa HOM05D000227 ORTHO05D001491 4.2e-20 102.1 136 47.1
FAN12G0389 Fragaria x ananassa HOM05D000085 ORTHO05D000274 9.4e-20 100.9 121 49.6
Sc11g0002930 Simmondsia chinensis HOM05D007408 ORTHO05D009325 2.7e-19 99.4 153 40.5
THA.LOC104805235 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 2.7e-19 99.4 160 43.1
AT3G25597 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 3.6e-19 99.0 146 44.5
Gohir.D12G176300 Gossypium hirsutum HOM05D007408 ORTHO05D009325 8.0e-19 97.8 163 39.9
Gorai.008G188700 Gossypium raimondii HOM05D007408 ORTHO05D009325 8.0e-19 97.8 163 39.9
Ciclev10033573m.g Citrus clementina HOM05D007408 ORTHO05D009325 1.0e-18 97.4 118 49.2
Gohir.A12G173800 Gossypium hirsutum HOM05D007408 ORTHO05D009325 1.0e-18 97.4 161 38.5
Lsat_1_v5_gn_3_60200 Lactuca sativa HOM05D007408 ORTHO05D009325 1.4e-18 97.1 157 42.0
HanXRQChr17g0551421 Helianthus annuus HOM05D007408 ORTHO05D009325 2.3e-18 96.3 140 44.3
BcaC06g31130 Brassica carinata HOM05D007408 ORTHO05D009325 4.0e-18 95.5 147 45.6
TPR.G24816 Trifolium pratense HOM05D007408 ORTHO05D009325 6.8e-18 94.7 141 42.6
A02p33920 Brassica napus HOM05D007408 ORTHO05D009325 8.8e-18 94.4 144 42.4
Psat4g113200 Pisum sativum HOM05D007408 ORTHO05D009325 1.2e-17 94.0 145 40.0
HanXRQChr15g0475971 Helianthus annuus HOM05D007408 ORTHO05D009325 1.5e-17 93.6 134 41.0
THA.LOC104822179 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 1.5e-17 93.6 129 45.0
Lj4g0027659 Lotus japonicus HOM05D007408 ORTHO05D009325 2.6e-17 92.8 158 37.3
BcaC03g17274 Brassica carinata HOM05D007408 ORTHO05D009325 3.4e-17 92.4 144 41.0
C02p52180 Brassica napus HOM05D007408 ORTHO05D009325 3.4e-17 92.4 144 41.0
BolC2t11303H Brassica oleracea HOM05D007408 ORTHO05D009325 3.4e-17 92.4 144 41.0
BraA02t08410Z Brassica rapa HOM05D007408 ORTHO05D009325 3.4e-17 92.4 144 41.7
CARHR146570 Cardamine hirsuta HOM05D007408 ORTHO05D009325 5.7e-17 91.7 146 41.8
Medtr8g069910 Medicago truncatula HOM05D007408 ORTHO05D009325 5.7e-17 91.7 145 40.0
arahy.Tifrunner.gnm1.ann1.24G1QJ Arachis hypogaea HOM05D007408 ORTHO05D009325 7.5e-17 91.3 141 43.3
Carub.0005s0338 Capsella rubella HOM05D007408 ORTHO05D009325 2.8e-16 89.4 163 41.1
HanXRQChr12g0365241 Helianthus annuus HOM05D007408 ORTHO05D009325 2.8e-16 89.4 149 41.6
AL5G14110 Arabidopsis lyrata HOM05D007408 ORTHO05D009325 6.3e-16 88.2 147 42.9
BcaB07g30265 Brassica carinata HOM05D007408 ORTHO05D009325 4.1e-15 85.5 156 38.5
Sp2g14870 Schrenkiella parvula HOM05D007408 ORTHO05D009325 4.1e-15 85.5 125 45.6
Thhalv10005058m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 5.4e-15 85.1 124 45.2
A06p42710 Brassica napus HOM05D007408 ORTHO05D009325 7.0e-15 84.7 124 46.0
BraA06t27184Z Brassica rapa HOM05D007408 ORTHO05D009325 7.0e-15 84.7 124 46.0
BcaC06g33976 Brassica carinata HOM05D007408 ORTHO05D009325 1.2e-14 84.0 124 45.2
C07p34420 Brassica napus HOM05D007408 ORTHO05D009325 2.0e-14 83.2 124 43.5
Ah.02g127260 Amaranthus hybridus HOM05D007408 ORTHO05D009325 2.7e-14 82.8 184 33.7
AT1G68700 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 3.5e-14 82.4 144 38.2
CsaV3_2G010890 Cucumis sativus L. HOM05D007408 ORTHO05D009325 5.9e-14 81.6 128 39.8
Peaxi162Scf00198g00024 Petunia axillaris HOM05D007408 ORTHO05D009325 1.0e-13 80.9 114 42.1
C05p24760 Brassica napus HOM05D007408 ORTHO05D009325 1.9e-12 76.6 124 41.1
Manes.14G095101 Manihot esculenta HOM05D007408 ORTHO05D009325 2.5e-12 76.3 70 60.0
BcaC05g26429 Brassica carinata HOM05D007408 ORTHO05D009325 4.2e-12 75.5 124 41.1
C03p72700 Brassica napus HOM05D007408 ORTHO05D009325 1.2e-11 73.9 122 38.5
BolC3t19568H Brassica oleracea HOM05D007408 ORTHO05D009325 1.2e-11 73.9 122 38.5
CARHR061510 Cardamine hirsuta HOM05D007408 ORTHO05D009325 1.2e-11 73.9 118 38.1
A08p27160 Brassica napus HOM05D007408 ORTHO05D009325 3.6e-11 72.4 122 38.5
AL1G39610 Arabidopsis lyrata HOM05D007408 ORTHO05D009325 4.7e-11 72.0 126 34.9
CARHR025780 Cardamine hirsuta HOM05D007408 ORTHO05D009325 6.1e-11 71.6 126 38.9
AT1G26140 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 1.0e-10 70.9 126 34.9
A09p39710 Brassica napus HOM05D007408 ORTHO05D009325 1.4e-10 70.5 122 38.5
BraA08t34661Z Brassica rapa HOM05D007408 ORTHO05D009325 1.4e-10 70.5 127 37.0
BraA09t39470Z Brassica rapa HOM05D007408 ORTHO05D009325 1.4e-10 70.5 122 38.5
Carub.0001s2482 Capsella rubella HOM05D007408 ORTHO05D009325 1.4e-10 70.5 120 37.5
C06p41170 Brassica napus HOM05D000085 ORTHO05D000274 2.3e-10 69.7 143 32.2
Sed0018728 Sechium edule HOM05D007408 ORTHO05D009325 2.3e-10 69.7 143 34.3
BcaC08g46321 Brassica carinata HOM05D000085 ORTHO05D000274 3.0e-10 69.3 143 31.5
BolC6t39308H Brassica oleracea HOM05D000085 ORTHO05D000274 3.0e-10 69.3 143 31.5
BcaB03g15828 Brassica carinata HOM05D007408 ORTHO05D009325 5.2e-10 68.6 118 39.0
Carub.0002s1524 Capsella rubella HOM05D007408 ORTHO05D009325 5.2e-10 68.6 136 32.4
Aqoxy3G03838 Aquilegia oxysepala HOM05D007408 ORTHO05D009325 6.8e-10 68.2 127 38.6
BcaB03g15446 Brassica carinata HOM05D007408 ORTHO05D009325 8.8e-10 67.8 117 33.3
BolC7t43970H Brassica oleracea HOM05D007408 ORTHO05D009325 8.8e-10 67.8 109 42.2
A07p35100 Brassica napus HOM05D000085 ORTHO05D000274 1.2e-09 67.4 144 34.0
BraA07t31103Z Brassica rapa HOM05D000085 ORTHO05D000274 1.2e-09 67.4 144 34.0
PSO782G1144 Papaver somniferum HOM05D007408 ORTHO05D009325 1.2e-09 67.4 148 35.8
Thhalv10009687m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 1.5e-09 67.0 119 36.1
A07p31850 Brassica napus HOM05D007408 ORTHO05D009325 2.6e-09 66.2 117 35.0
Sp5g23800 Schrenkiella parvula HOM05D007408 ORTHO05D009325 2.6e-09 66.2 118 33.9
BraA07t30814Z Brassica rapa HOM05D007408 ORTHO05D009325 4.4e-09 65.5 117 35.0
Sp1g22520 Schrenkiella parvula HOM05D007408 ORTHO05D009325 7.5e-09 64.7 129 34.9
ECA233G1102 Erigeron canadensis HOM05D002818 ORTHO05D003244 1.3e-08 63.9 121 38.8
Lsat_1_v5_gn_8_37901 Lactuca sativa HOM05D007408 ORTHO05D009325 2.8e-08 62.8 118 39.0
C06p37420 Brassica napus HOM05D007408 ORTHO05D009325 1.8e-07 60.1 117 32.5
MELO3C020393.2 Cucumis melo HOM05D007408 ORTHO05D009325 3.5e-06 55.8 129 34.9


User provided reference genes

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