Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 2.8e-255 884.8 458 100.0
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 7.4e-163 577.8 421 69.1
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 3.7e-162 575.5 449 65.7
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 7.0e-161 571.2 410 70.5
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 1.7e-159 566.6 403 70.2
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 2.2e-159 566.2 422 67.3
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 2.1e-157 559.7 461 63.6
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 1.0e-156 557.4 466 63.7
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 4.0e-156 555.4 461 63.8
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 4.0e-156 555.4 404 68.3
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.8e-154 549.3 459 61.4
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 4.5e-152 542.0 464 61.9
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 4.5e-152 542.0 425 65.2
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 3.6e-149 532.3 407 64.6
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 3.6e-149 532.3 407 64.6
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 5.2e-148 528.5 446 59.6
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 2.0e-147 526.6 463 61.1
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 7.0e-145 518.1 413 65.4
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 2.0e-144 516.5 428 62.1
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 2.7e-144 516.2 428 60.7
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 5.9e-144 515.0 411 65.2
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 7.7e-144 514.6 460 59.3
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 1.7e-143 513.5 453 61.1
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 1.7e-143 513.5 468 58.5
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.3e-143 513.1 466 59.7
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 2.9e-143 512.7 450 59.3
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 2.9e-143 512.7 407 63.6
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 3.8e-143 512.3 403 65.5
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 5.0e-143 511.9 406 63.5
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 1.5e-142 510.4 466 59.2
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 1.5e-142 510.4 407 63.1
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 2.5e-142 509.6 374 68.2
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 3.2e-142 509.2 419 61.8
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 2.8e-141 506.1 454 60.4
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 3.6e-141 505.8 448 59.4
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 8.0e-141 504.6 415 62.9
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.4e-140 503.8 408 63.0
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 4.0e-140 502.3 404 64.9
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 4.4e-139 498.8 384 64.6
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 7.5e-139 498.0 463 57.5
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 2.8e-138 496.1 424 59.9
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 3.7e-138 495.7 400 64.0
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 8.3e-138 494.6 405 61.2
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 1.6e-136 490.3 426 60.1
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 1.6e-136 490.3 459 57.1
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 4.5e-136 488.8 422 60.0
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 1.7e-135 486.9 402 62.4
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 3.8e-135 485.7 404 61.9
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 3.8e-135 485.7 453 56.5
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 3.8e-135 485.7 439 59.0
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 1.9e-134 483.4 490 55.3
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 3.6e-133 479.2 470 56.0
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 2.3e-132 476.5 421 59.4
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 3.0e-132 476.1 431 56.6
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 1.2e-131 474.2 400 62.2
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 1.5e-131 473.8 466 56.0
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 2.0e-131 473.4 460 54.8
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 2.6e-131 473.0 421 58.9
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 2.6e-131 473.0 376 64.6
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 4.4e-131 472.2 455 55.4
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 4.4e-131 472.2 459 54.0
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 5.7e-131 471.9 468 56.0
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 1.7e-130 470.3 458 56.3
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 1.7e-130 470.3 459 54.0
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 4.9e-130 468.8 455 54.9
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 3.2e-129 466.1 439 56.3
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 3.2e-129 466.1 421 56.8
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 4.1e-129 465.7 454 54.8
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 5.4e-129 465.3 435 56.6
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 1.2e-128 464.2 407 57.5
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 1.6e-128 463.8 407 57.2
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 5.9e-128 461.8 461 54.9
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 1.3e-127 460.7 419 55.6
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 1.9e-126 456.8 450 55.1
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 1.1e-124 451.1 380 61.1
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 1.7e-122 443.7 360 63.1
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 8.3e-122 441.4 436 55.0
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 3.0e-119 433.0 430 54.2
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 3.9e-119 432.6 425 54.4
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 1.1e-118 431.0 462 51.9
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 2.2e-114 416.8 419 52.0
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 1.4e-113 414.1 332 63.0
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 5.4e-113 412.1 331 63.7
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 5.1e-111 405.6 356 57.3
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 1.5e-107 394.0 381 54.9
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 2.1e-104 383.6 331 61.3
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 1.4e-100 370.9 292 64.7
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 1.8e-100 370.5 329 58.4
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 1.2e-99 367.9 379 52.8
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 1.9e-97 360.5 449 46.1
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 7.1e-97 358.6 402 47.0
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 2.7e-96 356.7 401 48.9
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 1.1e-94 351.3 384 50.0
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 1.1e-92 344.7 405 46.7
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 1.2e-91 341.3 295 59.3
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 2.0e-91 340.5 318 57.2
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 2.6e-91 340.1 318 56.9
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 7.6e-91 338.6 285 61.8
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 7.9e-88 328.6 294 55.8
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 4.5e-83 312.8 230 67.0
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 4.5e-83 312.8 425 43.3
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 4.9e-82 309.3 331 51.1
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 5.3e-52 209.5 290 45.5
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 9.1e-52 208.8 165 63.0
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.1e-49 201.8 132 74.2
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 7.7e-43 179.1 147 64.6
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 3.2e-41 173.7 164 54.9
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 9.1e-36 155.6 154 51.9
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.1e-33 148.7 106 67.9
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 7.5e-30 136.0 146 50.0
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 2.9e-26 124.0 110 56.4
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.1e-25 122.1 123 57.7
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 6.1e-24 116.3 96 58.3
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 7.5e-22 109.4 124 55.6
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 4.9e-21 106.7 91 54.9
CSS0033674 Camellia sinensis var. sinensis HOM05D050661 ORTHO05D112259 4.7e-08 63.5 34 82.4
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.8e-07 61.6 50 56.0


User provided reference genes

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