Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 1.3e-193 679.5 338 100.0
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 3.1e-142 508.8 321 77.3
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 9.1e-142 507.3 337 74.5
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 1.5e-139 500.0 328 75.0
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 2.7e-138 495.7 332 73.2
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 5.2e-137 491.5 302 79.5
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 7.5e-136 487.6 302 79.1
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 7.5e-136 487.6 295 80.7
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 7.5e-136 487.6 320 74.7
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 3.7e-135 485.3 322 75.5
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.8e-135 485.0 295 80.0
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 6.3e-135 484.6 302 78.5
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.1e-134 483.8 326 74.5
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 1.4e-134 483.4 334 73.1
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.4e-134 482.6 391 64.7
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 2.4e-134 482.6 329 73.6
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 5.4e-134 481.5 320 73.4
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.2e-133 480.3 292 79.8
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 2.0e-133 479.6 320 74.4
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 4.5e-133 478.4 309 75.7
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 4.5e-133 478.4 336 70.2
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 1.3e-132 476.9 322 72.7
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 2.9e-132 475.7 338 71.6
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 1.6e-130 469.9 299 77.6
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 4.7e-130 468.4 327 71.9
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 6.1e-130 468.0 294 78.2
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 8.0e-130 467.6 317 72.6
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 5.2e-129 464.9 314 72.9
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 6.8e-129 464.5 283 78.1
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 8.8e-129 464.2 281 80.1
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 9.8e-128 460.7 308 72.7
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 9.8e-128 460.7 311 73.0
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.2e-127 459.5 281 79.0
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.2e-127 459.5 281 79.4
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 6.3e-127 458.0 293 76.1
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 6.3e-127 458.0 335 71.6
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 8.3e-127 457.6 279 76.3
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.4e-126 456.8 329 68.1
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 4.1e-126 455.3 279 76.3
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 1.2e-125 453.8 331 71.0
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.2e-125 453.8 337 67.7
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.6e-125 453.4 337 68.2
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 4.5e-125 451.8 323 70.3
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 5.9e-125 451.4 319 69.9
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 5.9e-125 451.4 306 71.9
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 1.3e-124 450.3 286 76.9
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 2.9e-124 449.1 321 70.4
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 3.8e-124 448.7 324 67.6
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 5.0e-124 448.4 339 67.0
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 5.0e-124 448.4 310 71.6
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 8.6e-124 447.6 283 76.0
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 1.1e-123 447.2 329 68.4
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 1.5e-123 446.8 310 72.9
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 1.9e-123 446.4 319 70.2
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.9e-123 446.4 287 73.2
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 2.5e-123 446.0 330 67.9
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 9.5e-123 444.1 359 64.1
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 1.2e-122 443.7 311 70.7
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 1.2e-122 443.7 317 70.3
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 2.8e-122 442.6 310 69.7
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 4.7e-122 441.8 323 69.3
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 4.7e-122 441.8 310 70.0
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 4.7e-122 441.8 329 69.3
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 1.0e-121 440.7 311 69.5
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.4e-121 440.3 340 65.6
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 1.4e-121 440.3 412 58.7
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.4e-121 440.3 364 63.7
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 3.0e-121 439.1 284 73.6
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 3.0e-121 439.1 292 72.6
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 1.5e-120 436.8 316 70.9
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 3.4e-120 435.6 280 74.6
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 1.3e-119 433.7 317 68.5
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 2.2e-119 433.0 315 68.3
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 3.7e-119 432.2 321 68.5
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 3.7e-119 432.2 321 68.8
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 8.3e-119 431.0 339 65.8
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 8.3e-119 431.0 283 73.1
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.4e-118 430.3 321 68.2
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.4e-118 430.3 315 68.9
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 4.1e-118 428.7 325 67.7
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 7.8e-117 424.5 279 74.9
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 2.3e-116 422.9 330 66.4
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 9.5e-115 417.5 284 72.2
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 1.8e-113 413.3 415 54.7
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.2e-112 410.6 281 71.9
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 1.7e-111 406.8 268 73.1
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 2.7e-109 399.4 327 63.6
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.7e-108 396.7 318 65.7
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 5.0e-108 395.2 317 61.2
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 4.7e-106 388.7 335 59.7
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 9.8e-104 380.9 341 61.9
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 1.3e-100 370.5 284 64.4
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.1e-94 350.9 300 63.0
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 5.4e-94 348.6 257 62.6
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 2.3e-92 343.2 326 51.8
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 2.1e-90 336.7 321 58.3
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 2.0e-88 330.1 275 60.4
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 4.4e-88 328.9 320 56.9
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 9.9e-88 327.8 307 52.4
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 1.6e-82 310.5 253 56.9
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 2.1e-82 310.1 292 55.8
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.8e-71 272.7 157 77.1
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 9.0e-65 251.5 151 80.1
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 3.4e-64 249.6 165 70.3
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 7.4e-59 231.9 134 79.9
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 4.8e-58 229.2 134 82.8
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 2.9e-55 219.9 268 43.7
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 2.5e-54 216.9 135 74.8
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.6e-48 196.8 287 42.5
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.6e-45 187.6 134 63.4
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.5e-40 171.0 97 82.5
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 3.5e-32 143.3 302 33.8
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.3e-31 141.4 315 34.3
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 1.6e-29 134.4 321 28.3
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.4e-17 94.7 107 46.7
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.3e-15 88.2 103 47.6
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.3e-12 77.4 52 63.5


User provided reference genes

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