Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 1.5e-212 742.7 381 100.0
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 1.8e-133 479.9 363 67.5
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 3.7e-131 472.2 378 64.6
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 4.8e-131 471.9 348 68.7
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 1.4e-130 470.3 378 63.8
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 2.0e-129 466.5 369 64.0
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 2.9e-128 462.6 378 61.6
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 1.2e-126 457.2 370 63.8
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 2.1e-126 456.4 378 61.9
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 3.0e-125 452.6 380 61.6
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 4.8e-123 445.3 364 64.0
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 6.3e-123 444.9 378 59.8
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 8.2e-123 444.5 379 61.2
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 8.2e-123 444.5 379 61.2
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 3.1e-122 442.6 378 60.3
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 9.0e-122 441.0 373 59.2
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 2.0e-121 439.9 377 61.5
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 5.9e-121 438.3 378 58.2
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 7.2e-119 431.4 380 58.2
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 1.8e-117 426.8 379 58.6
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 6.7e-117 424.9 378 55.8
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 8.8e-117 424.5 354 61.3
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 1.1e-116 424.1 379 58.8
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 2.5e-116 422.9 356 59.8
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 3.3e-116 422.5 356 59.6
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 9.7e-116 421.0 378 57.1
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.3e-115 420.6 378 57.1
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 2.8e-115 419.5 378 56.3
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 2.8e-115 419.5 378 56.6
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 2.8e-115 419.5 378 56.3
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 1.1e-114 417.5 379 55.9
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 1.2e-113 414.1 380 55.3
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 7.7e-113 411.4 369 57.5
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 5.0e-112 408.7 379 55.9
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 3.2e-111 406.0 364 58.0
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 1.6e-110 403.7 378 56.9
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 1.0e-109 401.0 379 54.9
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 1.4e-109 400.6 377 56.0
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 1.4e-109 400.6 379 54.1
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 8.8e-109 397.9 378 53.4
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 1.1e-108 397.5 378 53.7
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 4.4e-108 395.6 380 53.7
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 4.4e-108 395.6 378 55.0
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 5.7e-108 395.2 378 54.8
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 4.8e-107 392.1 379 53.3
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 5.3e-106 388.7 379 53.6
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 2.6e-105 386.3 302 62.3
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 1.0e-104 384.4 378 52.6
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.7e-104 383.6 370 54.3
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 3.8e-104 382.5 385 54.5
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 1.4e-103 380.6 363 54.5
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 1.9e-103 380.2 359 55.2
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 2.1e-102 376.7 358 54.7
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 3.0e-101 372.9 263 72.2
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.5e-100 370.5 338 56.5
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 1.5e-100 370.5 373 53.6
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 4.8e-99 365.5 368 51.6
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 3.5e-97 359.4 318 56.0
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 3.5e-97 359.4 368 50.5
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 3.8e-96 355.9 371 50.1
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 5.5e-95 352.1 363 52.9
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 7.2e-95 351.7 377 50.7
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 2.7e-94 349.7 381 49.6
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 1.0e-93 347.8 368 49.2
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 2.0e-92 343.6 367 50.1
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 2.0e-89 333.6 263 65.0
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 7.7e-89 331.6 365 49.3
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 1.3e-88 330.9 369 48.0
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 1.6e-86 323.9 369 46.3
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 2.1e-86 323.6 387 49.1
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 2.3e-85 320.1 363 48.8
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.2e-84 317.8 380 44.5
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 2.0e-84 317.0 254 63.0
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 3.4e-84 316.2 378 45.0
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.3e-83 314.3 380 44.2
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 6.3e-83 312.0 396 42.4
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 8.3e-83 311.6 378 44.7
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 2.0e-81 307.0 378 44.4
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 7.7e-81 305.1 369 45.0
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 1.0e-80 304.7 369 43.1
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 1.3e-80 304.3 369 44.4
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 5.7e-76 288.9 369 42.0
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 1.3e-75 287.7 476 39.1
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 2.2e-75 287.0 262 55.7
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 1.2e-73 281.2 369 40.9
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 1.8e-69 267.3 379 40.1
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 2.0e-68 263.8 368 42.4
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 1.3e-67 261.2 235 60.4
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 3.7e-67 259.6 255 54.9
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 4.9e-59 232.6 377 39.0
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 5.4e-58 229.2 381 37.8
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 8.3e-51 205.3 371 36.7
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 6.6e-48 195.7 368 35.3
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 1.1e-47 194.9 369 35.2
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 3.8e-43 179.9 263 39.9
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 1.6e-41 174.5 143 60.1
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 2.7e-41 173.7 209 48.8
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 4.0e-37 159.8 372 32.8
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 3.8e-35 153.3 322 34.5
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 3.5e-33 146.7 318 34.0
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 6.6e-32 142.5 169 46.2
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.5e-31 141.4 131 54.2
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 9.9e-28 128.6 114 50.9
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.6e-25 121.3 148 43.2
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 6.0e-25 119.4 148 49.3
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 2.5e-23 114.0 419 25.5
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 8.1e-22 109.0 97 55.7
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 4.0e-21 106.7 114 44.7
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 2.6e-20 104.0 115 52.2


User provided reference genes

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