Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 7.9e-258 893.3 454 100.0
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 3.6e-234 814.7 454 91.6
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.8e-145 520.0 429 63.6
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 9.1e-145 517.7 447 63.3
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 1.5e-144 516.9 394 67.0
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 7.7e-144 514.6 398 68.1
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-143 513.8 392 68.1
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 2.9e-143 512.7 472 60.4
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 3.8e-143 512.3 397 66.2
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 6.5e-143 511.5 393 69.2
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 6.5e-143 511.5 437 62.5
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 1.9e-142 510.0 379 68.3
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 7.2e-142 508.1 383 67.4
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.1e-141 506.5 392 67.3
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 4.7e-141 505.4 440 63.2
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 1.4e-140 503.8 379 68.3
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 8.8e-140 501.1 372 69.1
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 2.0e-139 500.0 376 66.8
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 3.3e-139 499.2 460 60.0
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 7.4e-139 498.0 439 62.0
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 1.7e-138 496.9 428 62.4
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.7e-138 496.9 460 59.8
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 8.2e-138 494.6 501 55.7
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 2.4e-137 493.0 321 75.1
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 5.3e-137 491.9 358 67.9
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 2.0e-136 490.0 370 68.4
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.1e-134 484.2 427 61.6
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 1.1e-134 484.2 448 59.2
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 2.5e-134 483.0 377 64.7
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 4.2e-134 482.3 438 58.2
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 1.6e-133 480.3 422 60.4
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.0e-133 478.0 470 56.2
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 1.4e-132 477.2 350 67.7
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 6.7e-132 474.9 411 62.8
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 6.7e-132 474.9 357 66.4
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 8.8e-132 474.6 455 57.1
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 1.5e-131 473.8 363 66.4
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 2.0e-131 473.4 380 64.2
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 9.7e-131 471.1 420 59.8
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 1.7e-130 470.3 347 68.3
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 2.8e-130 469.5 362 65.5
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 4.8e-130 468.8 433 57.5
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 4.8e-130 468.8 337 70.0
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 4.8e-130 468.8 465 56.8
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 8.2e-130 468.0 414 58.2
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 1.8e-129 466.8 378 62.7
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 2.4e-129 466.5 453 55.0
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 3.1e-129 466.1 325 70.2
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 4.1e-129 465.7 345 67.0
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 7.0e-129 464.9 351 65.8
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 9.1e-129 464.5 449 56.1
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.2e-128 464.2 395 63.0
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 1.6e-128 463.8 369 64.2
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.6e-128 463.0 350 67.4
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 3.5e-128 462.6 432 56.5
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 4.5e-128 462.2 390 60.8
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 7.7e-128 461.5 359 64.6
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 1.0e-127 461.1 359 67.7
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.2e-127 459.9 345 68.1
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 3.8e-127 459.1 404 59.9
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 8.5e-127 458.0 348 65.8
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.1e-126 457.6 345 68.1
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 1.9e-126 456.8 374 62.8
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 1.9e-126 456.8 428 57.9
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.2e-126 456.1 354 66.4
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 1.2e-125 454.1 404 59.7
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 3.6e-125 452.6 376 61.4
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 6.1e-125 451.8 346 65.6
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 8.0e-125 451.4 398 57.5
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.0e-124 451.1 408 58.8
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 1.8e-124 450.3 399 58.6
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 2.3e-124 449.9 342 65.5
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.0e-124 449.5 371 62.8
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 4.0e-124 449.1 481 52.0
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 1.7e-122 443.7 463 54.2
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 8.2e-122 441.4 452 55.3
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 8.2e-122 441.4 324 70.1
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 4.5e-120 435.6 314 68.2
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.7e-119 433.7 329 67.2
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 6.5e-119 431.8 356 58.7
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 6.5e-119 431.8 345 62.0
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 2.1e-117 426.8 349 60.5
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 4.4e-115 419.1 364 60.7
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 4.4e-115 419.1 375 58.4
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 2.8e-114 416.4 346 59.5
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 3.8e-111 406.0 319 62.7
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.4e-108 397.5 299 64.5
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 2.3e-108 396.7 267 71.9
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 3.0e-108 396.4 515 46.0
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.2e-106 390.2 330 62.7
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 2.8e-106 389.8 294 63.6
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 8.3e-106 388.3 330 60.9
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 7.8e-104 381.7 256 69.9
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.8e-103 379.4 398 52.5
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 4.3e-102 375.9 251 70.9
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.0e-100 369.8 371 55.0
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 2.1e-85 320.5 382 51.3
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.3e-82 311.2 212 72.6
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 6.0e-80 302.4 314 54.1
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 6.6e-79 298.9 235 64.7
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 6.4e-74 282.3 341 41.9
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 3.2e-73 280.0 205 67.8
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.7e-71 274.2 282 54.6
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 1.5e-67 261.2 279 57.7
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.0e-67 260.8 233 55.4
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.3e-66 258.1 278 52.2
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 3.9e-63 246.5 223 56.1
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.6e-61 241.1 189 66.1
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 2.9e-58 230.3 191 63.9
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.5e-54 218.0 290 42.8
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.2e-51 208.4 280 40.0
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 2.6e-51 207.2 182 54.9
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 6.7e-47 192.6 203 51.7
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 1.0e-39 168.7 197 52.8
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 9.7e-38 162.2 188 47.3
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 6.3e-37 159.5 146 52.1
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 1.2e-35 155.2 111 63.1
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 1.7e-34 151.4 234 40.2
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 2.4e-28 131.0 215 42.8
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.0e-26 125.6 229 37.6
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 2.9e-26 124.0 82 65.9
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 8.5e-26 122.5 340 29.1
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 3.2e-25 120.6 393 28.5
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 4.2e-25 120.2 196 38.3
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 7.2e-25 119.4 193 42.5
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 9.4e-25 119.0 189 41.3
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 4.7e-24 116.7 78 74.4
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 7.9e-24 115.9 106 63.2
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 7.9e-24 115.9 206 35.4
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 6.7e-23 112.8 104 57.7
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 1.3e-21 108.6 104 56.7
Mapoly0003s0267 Marchantia polymorpha HOM05D032652 ORTHO05D005510 1.4e-20 105.1 298 29.5
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 3.1e-20 104.0 168 35.1
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 7.0e-20 102.8 107 52.3
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 9.1e-20 102.4 63 76.2
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 1.5e-19 101.7 144 43.8
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.4e-15 88.6 360 26.7
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 1.8e-15 88.2 321 26.5
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 3.0e-15 87.4 104 51.0
SMO263G0001 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 3.9e-15 87.0 270 25.6
SMO118G0092 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 2.6e-14 84.3 304 25.0
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 9.7e-14 82.4 56 64.3
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 1.7e-13 81.6 281 24.9
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 4.8e-13 80.1 71 57.7
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 2.4e-12 77.8 257 27.2
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 1.5e-09 68.6 192 27.6
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.6e-08 65.1 62 46.8
MCO15G091 Micromonas commoda HOM05D036318 ORTHO05D005510 7.5e-06 56.2 337 23.1


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