Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g06750 Coffea canephora HOM05D006160 ORTHO05D007674 2.3e-82 308.9 162 100.0
Cc11_g06840 Coffea canephora HOM05D006160 ORTHO05D007674 1.2e-43 180.3 101 95.0
Cc11_g06740 Coffea canephora HOM05D006160 ORTHO05D007674 5.7e-41 171.4 101 91.1
Cc07_g02680 Coffea canephora HOM05D006160 ORTHO05D007674 4.8e-40 168.3 101 90.1
Oeu050236.1 Olea europaea HOM05D006160 ORTHO05D007674 4.0e-18 95.5 101 61.4
Cfa007476 Carpinus fangiana HOM05D006160 ORTHO05D007674 2.8e-16 89.4 104 56.7
Dinv35018 Davidia involucrata HOM05D006160 ORTHO05D007674 3.7e-16 89.0 101 55.4
Sopen02g032010 Solanum pennellii HOM05D006160 ORTHO05D007674 3.7e-16 89.0 101 51.5
Haze_14622 Corylus avellana HOM05D006160 ORTHO05D007674 6.3e-16 88.2 104 56.7
Solyc02g087260.1 Solanum lycopersicum HOM05D006160 ORTHO05D007674 6.3e-16 88.2 101 51.5
QL02p078501 Quercus lobata HOM05D006160 ORTHO05D007674 4.1e-15 85.5 128 46.9
Nitab4.5_0007185g0010 Nicotiana tabacum HOM05D006160 ORTHO05D007674 1.6e-14 83.6 101 49.5
MSTRG.15499 Avicennia marina HOM05D006160 ORTHO05D007674 2.0e-14 83.2 107 49.5
Lj7P407T47 Lonicera japonica HOM05D006160 ORTHO05D007674 2.0e-14 83.2 102 51.0
Cpa.g.c29962.2 Carica papaya HOM05D006160 ORTHO05D007674 2.7e-14 82.8 101 48.5
PGSC0003DMG400001293 Solanum tuberosum HOM05D006160 ORTHO05D007674 2.7e-14 82.8 101 48.5
CSS0008843 Camellia sinensis var. sinensis HOM05D006160 ORTHO05D007674 3.5e-14 82.4 101 48.5
CSS0046343 Camellia sinensis var. sinensis HOM05D006160 ORTHO05D007674 1.7e-13 80.1 101 47.5
PGR083G2234 Punica granatum HOM05D006160 ORTHO05D007674 1.7e-13 80.1 103 47.6
Migut.K01355 Erythranthe guttata HOM05D006160 ORTHO05D007674 6.5e-13 78.2 101 48.5
CiPaw.04G022200 Carya illinoinensis HOM05D006160 ORTHO05D007674 1.5e-12 77.0 125 43.2
unitig_32.g10741 Utricularia gibba HOM05D006160 ORTHO05D007674 4.2e-12 75.5 102 44.1
Hma1.2p1_0849F.1_g228140 Hydrangea macrophylla HOM05D006160 ORTHO05D007674 7.2e-12 74.7 100 46.0
CiPaw.03G033700 Carya illinoinensis HOM05D006160 ORTHO05D007674 9.5e-12 74.3 131 44.3
TAR629G0883 Trochodendron aralioides HOM05D006160 ORTHO05D007674 9.5e-12 74.3 101 45.5
unitig_748.g8439 Utricularia gibba HOM05D006160 ORTHO05D007674 1.6e-11 73.6 101 47.5
Manes.11G038900 Manihot esculenta HOM05D006160 ORTHO05D007674 2.1e-11 73.2 102 46.1
DCAR_013983 Daucus carota HOM05D006160 ORTHO05D007674 6.1e-11 71.6 143 37.8
Potri.005G122800 Populus trichocarpa HOM05D006160 ORTHO05D007674 8.0e-11 71.2 101 46.5
Sabra05G0101000 Salix brachista HOM05D006160 ORTHO05D007674 1.8e-10 70.1 103 45.6
TAR622G0926 Trochodendron aralioides HOM05D006160 ORTHO05D007674 1.8e-10 70.1 105 43.8
CsaV3_3G042010 Cucumis sativus L. HOM05D006160 ORTHO05D007674 4.0e-10 68.9 100 45.0
MELO3C009921.2 Cucumis melo HOM05D006160 ORTHO05D007674 5.2e-10 68.6 100 45.0
TWI56G1459 Tripterygium wilfordii HOM05D006160 ORTHO05D007674 5.2e-10 68.6 109 46.8
GSVIVG01032544001 Vitis vinifera HOM05D006160 ORTHO05D007674 5.2e-10 68.6 106 46.2
CAN.G206.64 Capsicum annuum HOM05D006160 ORTHO05D007674 8.8e-10 67.8 101 43.6
Rhsim08G0057500 Rhododendron simsii HOM05D006160 ORTHO05D007674 1.2e-09 67.4 101 45.5
Rhsim08G0061700 Rhododendron simsii HOM05D006160 ORTHO05D007674 1.2e-09 67.4 101 45.5
SalBow1G6035 Salvia bowleyana HOM05D006160 ORTHO05D007674 1.2e-09 67.4 104 43.3
ClCG10G014570 Citrullus lanatus HOM05D006160 ORTHO05D007674 1.5e-09 67.0 106 44.3
PSO591G0049 Papaver somniferum HOM05D006160 ORTHO05D007674 2.0e-09 66.6 102 41.2
Sed0020076 Sechium edule HOM05D006160 ORTHO05D007674 2.6e-09 66.2 100 46.0
Duzib264G1011 Durio zibethinus HOM05D006160 ORTHO05D007674 3.4e-09 65.9 101 46.5
Thecc.04G002600 Theobroma cacao HOM05D006160 ORTHO05D007674 3.4e-09 65.9 102 45.1
Thecc.04G002700 Theobroma cacao HOM05D006160 ORTHO05D007674 3.4e-09 65.9 102 45.1
Atru.chr8.2408 Acer truncatum HOM05D006160 ORTHO05D007674 7.5e-09 64.7 113 43.4
Aqoxy3G03111 Aquilegia oxysepala HOM05D006160 ORTHO05D007674 9.8e-09 64.3 101 41.6
Actinidia33976 Actinidia chinensis HOM05D006160 ORTHO05D007674 1.7e-08 63.5 101 40.6
COL.COLO4_34360 Corchorus olitorius HOM05D006160 ORTHO05D007674 3.7e-08 62.4 103 42.7
PSO832G1329 Papaver somniferum HOM05D006160 ORTHO05D007674 3.7e-08 62.4 102 39.2
Gohir.A05G361800 Gossypium hirsutum HOM05D006160 ORTHO05D007674 8.3e-08 61.2 101 42.6
Prupe.3G278200 Prunus persica HOM05D006160 ORTHO05D007674 8.3e-08 61.2 103 41.7
RcHm_v2.0_Chr2g0170271 Rosa chinensis HOM05D006160 ORTHO05D007674 1.1e-07 60.8 101 41.6
FAN09G3358 Fragaria x ananassa HOM05D006160 ORTHO05D007674 3.1e-07 59.3 125 40.8
FAN14G4363 Fragaria x ananassa HOM05D006160 ORTHO05D007674 7.0e-07 58.2 125 39.2
FvH4_6g50020 Fragaria vesca HOM05D006160 ORTHO05D007674 9.2e-07 57.8 125 40.8
AL3G10850 Arabidopsis lyrata HOM05D006160 ORTHO05D007674 1.2e-06 57.4 103 35.0
FAN05G0598 Fragaria x ananassa HOM05D006160 ORTHO05D007674 1.2e-06 57.4 125 36.8
MD17G1040800 Malus domestica HOM05D006160 ORTHO05D007674 2.7e-06 56.2 106 41.5


User provided reference genes

Program Settings