Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g04650 Coffea canephora HOM05D035493 ORTHO05D154531 1.6e-82 309.3 153 100.0
Cc11_g06090 Coffea canephora HOM05D035493 ORTHO05D152978 4.7e-69 264.6 149 88.6
Cc11_g00670 Coffea canephora HOM05D035493 ORTHO05D153837 5.5e-62 241.1 153 82.4
DCAR_029395 Daucus carota HOM05D001137 ORTHO05D001967 2.7e-08 62.8 109 36.7
Manes.09G169100 Manihot esculenta HOM05D001137 ORTHO05D001967 1.7e-07 60.1 103 37.9
Nitab4.5_0002432g0050 Nicotiana tabacum HOM05D001137 ORTHO05D001967 3.0e-07 59.3 109 34.9
Dinv30786 Davidia involucrata HOM05D001137 ORTHO05D001967 3.9e-07 58.9 112 34.8
Peaxi162Scf00037g00923 Petunia axillaris HOM05D001137 ORTHO05D001967 3.9e-07 58.9 112 37.5
Sopen01g042910 Solanum pennellii HOM05D001137 ORTHO05D001967 5.1e-07 58.5 112 36.6
PGSC0003DMG400024701 Solanum tuberosum HOM05D001137 ORTHO05D001967 5.1e-07 58.5 112 36.6
CSS0049898 Camellia sinensis var. sinensis HOM05D001137 ORTHO05D001967 6.6e-07 58.2 109 34.9
Cc02_g31050 Coffea canephora HOM05D001137 ORTHO05D001967 6.6e-07 58.2 111 37.8
Manes.08G119300 Manihot esculenta HOM05D001137 ORTHO05D001967 6.6e-07 58.2 103 35.9
Nitab4.5_0002344g0120 Nicotiana tabacum HOM05D001137 ORTHO05D001967 6.6e-07 58.2 112 37.5
Solyc01g099350.3 Solanum lycopersicum HOM05D001137 ORTHO05D001967 6.6e-07 58.2 112 36.6
ClCG02G015540 Citrullus lanatus HOM05D001137 ORTHO05D001967 8.6e-07 57.8 115 33.0
Hma1.2p1_1334F.1_g276250 Hydrangea macrophylla HOM05D001137 ORTHO05D001967 1.1e-06 57.4 111 32.4
Sabra05G0032200 Salix brachista HOM05D001137 ORTHO05D001967 1.1e-06 57.4 111 35.1
CAN.G1034.50 Capsicum annuum HOM05D001137 ORTHO05D001967 1.5e-06 57.0 104 38.5
PSO170G2566 Papaver somniferum HOM05D001137 ORTHO05D001967 1.5e-06 57.0 113 34.5
Os03g0835600 Oryza sativa ssp. japonica HOM05D001137 ORTHO05D001967 1.9e-06 56.6 103 35.0
Sed0022056 Sechium edule HOM05D001137 ORTHO05D001967 1.9e-06 56.6 105 36.2
Dinv40308 Davidia involucrata HOM05D001137 ORTHO05D001967 2.5e-06 56.2 112 33.9
PSO210G0810 Papaver somniferum HOM05D001137 ORTHO05D001967 3.3e-06 55.8 113 33.6
Potri.005G026900 Populus trichocarpa HOM05D001137 ORTHO05D001967 3.3e-06 55.8 111 34.2
MSTRG.27988 Avicennia marina HOM05D001137 ORTHO05D001967 4.3e-06 55.5 104 36.5
Aqoxy5G00704 Aquilegia oxysepala HOM05D001137 ORTHO05D001967 5.6e-06 55.1 111 33.3
Actinidia05688 Actinidia chinensis HOM05D001137 ORTHO05D001967 7.3e-06 54.7 111 34.2
Nitab4.5_0004754g0030 Nicotiana tabacum HOM05D001137 ORTHO05D001967 7.3e-06 54.7 112 35.7
THA.LOC104821718 Tarenaya hassleriana HOM05D001137 ORTHO05D001967 9.6e-06 54.3 132 31.1


User provided reference genes

Program Settings