Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g04430 Coffea canephora HOM05D006612 ORTHO05D009014 3.5e-97 358.2 171 100.0
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 8.4e-43 177.6 170 47.1
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.6e-41 171.8 172 48.3
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-38 163.3 170 45.9
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-38 163.3 170 45.9
Cc09_g02240 Coffea canephora HOM05D006612 ORTHO05D009014 8.4e-35 151.0 139 48.2
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-34 149.1 168 44.0
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-33 147.1 171 42.7
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-33 145.2 171 42.7
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 6.6e-32 141.4 174 41.4
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 6.6e-32 141.4 164 42.1
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 6.6e-32 141.4 171 42.1
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-31 139.4 170 41.2
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 1.6e-30 136.7 174 43.7
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-30 136.7 168 38.7
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-30 136.3 171 42.1
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 2.8e-30 136.0 139 47.5
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 1.8e-29 133.3 139 43.2
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 4.5e-28 128.6 163 38.0
SGA_v2.0_scaffold1G00633 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-27 125.6 121 49.6
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 4.9e-27 125.2 164 39.0
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 4.2e-26 122.1 138 43.5
SGA_v2.0_scaffold33G13377 Striga asiatica HOM05D006612 ORTHO05D009014 9.3e-26 120.9 170 39.4
SGA_v2.0_scaffold144G35921 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-24 117.5 121 45.5
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 5.1e-24 115.2 175 37.7
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 9.6e-23 110.9 129 41.9
SGA_v2.0_scaffold146G36211 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-21 106.3 96 46.9
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-21 106.3 144 40.3
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 6.9e-21 104.8 143 32.9
Lsat_1_v5_gn_8_167080 Lactuca sativa HOM05D006612 ORTHO05D009014 9.0e-21 104.4 127 37.8
SGA_v2.0_scaffold52G19153 Striga asiatica HOM05D006612 ORTHO05D009014 5.8e-20 101.7 89 47.2
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-19 100.1 164 35.4
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-19 99.8 125 41.6
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-18 97.1 88 45.5
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-18 96.3 96 46.9
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 4.2e-18 95.5 120 36.7
Cc02_g21340 Coffea canephora HOM05D006612 ORTHO05D009014 3.5e-17 92.4 170 35.9
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 3.0e-16 89.4 121 35.5
Cc00_g35160 Coffea canephora HOM05D006612 ORTHO05D009014 3.3e-15 85.9 166 28.3
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 1.6e-14 83.6 173 27.7
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 2.8e-14 82.8 93 44.1
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 6.2e-14 81.6 112 39.3
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-13 80.1 139 34.5
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.9e-13 78.2 167 26.3
SGA_v2.0_scaffold19G08855 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-12 76.3 66 48.5
SGA_v2.0_scaffold14G06973 Striga asiatica HOM05D006612 ORTHO05D009014 4.5e-12 75.5 90 40.0
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 5.8e-12 75.1 92 47.8
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 7.6e-12 74.7 154 25.3
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 7.6e-12 74.7 75 45.3
Cc03_g10290 Coffea canephora HOM05D006612 ORTHO05D009014 2.2e-11 73.2 125 27.2
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 3.8e-11 72.4 117 27.4
SGA_v2.0_scaffold134G34706 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-11 72.4 138 32.6
CANSAT01G1154 Cannabis sativa HOM05D000824 ORTHO05D010619 1.4e-10 70.5 173 25.4
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 2.5e-10 69.7 143 25.9
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 5.5e-10 68.6 166 25.9
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 1.6e-09 67.0 81 39.5
Oeu058483.1 Olea europaea HOM05D008860 ORTHO05D010619 1.0e-08 64.3 127 28.3
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 1.8e-08 63.5 154 23.4
SGA_v2.0_scaffold158G37500 Striga asiatica HOM05D006612 ORTHO05D009014 5.1e-08 62.0 58 43.1
SGA_v2.0_scaffold28G11832 Striga asiatica HOM05D006612 ORTHO05D009014 5.1e-08 62.0 138 29.0
Oeu032902.1 Olea europaea HOM05D008860 ORTHO05D010619 1.5e-07 60.5 108 32.4
Dinv03710 Davidia involucrata HOM05D015775 ORTHO05D010384 2.5e-07 59.7 105 24.8
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 9.7e-07 57.8 137 25.5
SGA_v2.0_scaffold2G01273 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-06 57.4 45 51.1
Dinv11979 Davidia involucrata HOM05D006612 ORTHO05D009014 3.7e-06 55.8 89 28.1
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 4.8e-06 55.5 105 23.8
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.8e-06 55.5 75 37.3
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 6.3e-06 55.1 105 23.8
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 6.3e-06 55.1 105 23.8
vmacro17288 Vaccinium macrocarpon HOM05D008860 ORTHO05D010619 8.2e-06 54.7 174 21.3


User provided reference genes

Program Settings