Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g04100 Coffea canephora HOM05D000361 ORTHO05D004243 4.4e-101 371.3 190 100.0
Cc05_g04720 Coffea canephora HOM05D000361 ORTHO05D004243 1.5e-93 346.3 192 95.3
Cc02_g26000 Coffea canephora HOM05D000361 ORTHO05D004243 4.6e-90 334.7 189 92.6
Cc04_g08620 Coffea canephora HOM05D000361 ORTHO05D004243 4.6e-90 334.7 189 92.6
Cc02_g33820 Coffea canephora HOM05D000361 ORTHO05D004243 1.0e-89 333.6 194 90.7
Cc01_g21390 Coffea canephora HOM05D000361 ORTHO05D004243 6.4e-84 314.3 188 89.9
Nitab4.5_0000363g0270 Nicotiana tabacum HOM05D000361 ORTHO05D004243 2.9e-68 262.3 188 75.5
Nitab4.5_0006144g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 4.9e-68 261.5 188 74.5
Peaxi162Scf00058g02630 Petunia axillaris HOM05D000361 ORTHO05D004243 8.4e-68 260.8 188 73.9
GSVIVG01028119001 Vitis vinifera HOM05D000361 ORTHO05D004243 1.4e-67 260.0 187 75.9
Rhsim01G0290600 Rhododendron simsii HOM05D000361 ORTHO05D004243 1.2e-66 256.9 188 73.9
Actinidia25847 Actinidia chinensis HOM05D000361 ORTHO05D004243 1.6e-66 256.5 188 75.5
Cpa.g.sc18.42 Carica papaya HOM05D000361 ORTHO05D004243 3.5e-66 255.4 188 72.9
Duzib133G0716 Durio zibethinus HOM05D000361 ORTHO05D004243 4.6e-66 255.0 188 73.4
Actinidia20995 Actinidia chinensis HOM05D000361 ORTHO05D004243 6.0e-66 254.6 188 75.0
ATR0796G177 Amborella trichopoda HOM05D000361 ORTHO05D004243 1.3e-65 253.4 188 71.3
Nn4g25601 Nelumbo nucifera HOM05D000361 ORTHO05D004243 1.3e-65 253.4 188 71.8
Solyc06g009650.3 Solanum lycopersicum HOM05D000361 ORTHO05D004243 1.3e-65 253.4 188 71.8
Sopen06g004290 Solanum pennellii HOM05D000361 ORTHO05D004243 1.7e-65 253.1 188 71.8
Dinv33114 Davidia involucrata HOM05D000361 ORTHO05D004243 2.3e-65 252.7 188 74.5
Hma1.2p1_0486F.1_g163260 Hydrangea macrophylla HOM05D000361 ORTHO05D004243 2.3e-65 252.7 188 72.9
PGR119G2139 Punica granatum HOM05D000361 ORTHO05D004243 2.3e-65 252.7 187 72.7
Thecc.01G313200 Theobroma cacao HOM05D000361 ORTHO05D004243 3.0e-65 252.3 188 71.3
CAN.G1280.26 Capsicum annuum HOM05D000361 ORTHO05D004243 3.9e-65 251.9 188 71.3
Eucgr.H00929 Eucalyptus grandis HOM05D000361 ORTHO05D004243 3.9e-65 251.9 187 71.7
Duzib138G1700 Durio zibethinus HOM05D000361 ORTHO05D004243 5.1e-65 251.5 188 72.9
Gohir.D12G128800 Gossypium hirsutum HOM05D000361 ORTHO05D004243 1.5e-64 250.0 188 71.3
Gorai.008G139800 Gossypium raimondii HOM05D000361 ORTHO05D004243 1.5e-64 250.0 188 71.3
MSTRG.21685 Avicennia marina HOM05D000361 ORTHO05D004243 1.9e-64 249.6 185 73.0
TWI36G0074 Tripterygium wilfordii HOM05D000361 ORTHO05D004243 1.9e-64 249.6 188 70.7
vmacro15111 Vaccinium macrocarpon HOM05D000361 ORTHO05D004243 2.5e-64 249.2 197 70.6
Gohir.A12G125100 Gossypium hirsutum HOM05D000361 ORTHO05D004243 3.3e-64 248.8 188 70.7
CSS0010179 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 4.3e-64 248.4 188 71.8
CSS0030911 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 4.3e-64 248.4 188 71.8
CsaV3_7G025080 Cucumis sativus L. HOM05D000361 ORTHO05D004243 9.6e-64 247.3 188 70.7
Prupe.5G007800 Prunus persica HOM05D000361 ORTHO05D004243 9.6e-64 247.3 188 71.3
Ciclev10018936m.g Citrus clementina HOM05D000361 ORTHO05D004243 1.2e-63 246.9 188 69.7
MD03G1295300 Malus domestica HOM05D000361 ORTHO05D004243 1.6e-63 246.5 188 70.7
Sed0012026 Sechium edule HOM05D000361 ORTHO05D004243 1.6e-63 246.5 188 70.2
MELO3C023707.2 Cucumis melo HOM05D000361 ORTHO05D004243 2.1e-63 246.1 185 71.4
PSO017G2448 Papaver somniferum HOM05D000361 ORTHO05D004243 2.8e-63 245.7 188 71.3
Haze_05039 Corylus avellana HOM05D000361 ORTHO05D004243 4.7e-63 245.0 186 71.0
Atru.chr5.1003 Acer truncatum HOM05D000361 ORTHO05D004243 6.2e-63 244.6 188 68.6
CSS0012467 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 1.1e-62 243.8 189 72.5
PSO063G6259 Papaver somniferum HOM05D000361 ORTHO05D004243 1.1e-62 243.8 188 70.7
Cfa005802 Carpinus fangiana HOM05D000361 ORTHO05D005006 3.1e-62 242.3 185 70.8
CANSAT25G2078 Cannabis sativa HOM05D000361 ORTHO05D004243 4.0e-62 241.9 188 69.7
arahy.Tifrunner.gnm1.ann1.G7NAMC Arachis hypogaea HOM05D000361 ORTHO05D004243 1.2e-61 240.4 185 69.2
Ciclev10010795m.g Citrus clementina HOM05D000361 ORTHO05D004243 4.4e-61 238.4 188 68.1
Gohir.A11G109900 Gossypium hirsutum HOM05D000361 ORTHO05D004243 5.8e-61 238.0 188 67.6
CiPaw.07G117400 Carya illinoinensis HOM05D000361 ORTHO05D004243 7.6e-61 237.7 185 69.7
Aqoxy3G01218 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 9.9e-61 237.3 188 69.1
Manes.01G227700 Manihot esculenta HOM05D000361 ORTHO05D004243 9.9e-61 237.3 188 68.1
Sopen01g031260 Solanum pennellii HOM05D000361 ORTHO05D004243 9.9e-61 237.3 188 70.7
QL12p019966 Quercus lobata HOM05D000361 ORTHO05D004243 1.3e-60 236.9 186 68.3
Solyc01g079490.2 Solanum lycopersicum HOM05D000361 ORTHO05D004243 1.3e-60 236.9 188 70.7
Aqoxy3G02976 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 1.7e-60 236.5 188 69.7
Gorai.007G122900 Gossypium raimondii HOM05D000361 ORTHO05D004243 2.2e-60 236.1 188 67.0
Manes.05G003200 Manihot esculenta HOM05D000361 ORTHO05D004243 4.9e-60 235.0 190 66.8
Nitab4.5_0011075g0020 Nicotiana tabacum HOM05D000361 ORTHO05D004243 6.4e-60 234.6 192 66.7
Gohir.D11G114600 Gossypium hirsutum HOM05D000361 ORTHO05D004243 2.4e-59 232.6 188 66.5
Psat6g161800 Pisum sativum HOM05D000361 ORTHO05D004243 2.4e-59 232.6 186 67.7
Potri.002G196300 Populus trichocarpa HOM05D000361 ORTHO05D004243 2.4e-59 232.6 188 67.6
Medtr1g087100 Medicago truncatula HOM05D000361 ORTHO05D004243 4.2e-59 231.9 186 67.7
Ca_10285_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 5.4e-59 231.5 185 67.0
TPR.G19758 Trifolium pratense HOM05D000361 ORTHO05D004243 5.4e-59 231.5 186 67.2
VMungo0720G0598 Vigna mungo HOM05D000361 ORTHO05D004243 7.1e-59 231.1 185 68.1
Glyma.02G012800 Glycine max HOM05D000361 ORTHO05D004243 2.7e-58 229.2 185 66.5
Glyma.10G013400 Glycine max HOM05D000361 ORTHO05D004243 2.7e-58 229.2 185 67.0
Potri.014G120900 Populus trichocarpa HOM05D000361 ORTHO05D004243 1.0e-57 227.3 188 67.0
Phvul.007G214400 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 1.3e-57 226.9 185 67.6
DCAR_012354 Daucus carota HOM05D000361 ORTHO05D004243 1.7e-57 226.5 188 66.5
Thhalv10028443m.g Eutrema salsugineum HOM05D000361 ORTHO05D004243 2.3e-57 226.1 187 65.8
arahy.Tifrunner.gnm1.ann1.N0EKR1 Arachis hypogaea HOM05D000361 ORTHO05D004243 3.0e-57 225.7 218 58.3
Carub.0006s3520 Capsella rubella HOM05D000361 ORTHO05D004243 3.0e-57 225.7 187 65.8
CDE11G0331 Ceratophyllum demersum HOM05D000361 ORTHO05D004243 3.0e-57 225.7 188 64.4
Lj5g0013347 Lotus japonicus HOM05D000361 ORTHO05D004243 3.0e-57 225.7 184 66.3
CARHR249640 Cardamine hirsuta HOM05D000361 ORTHO05D004243 1.1e-56 223.8 187 64.2
AT4G02030 Arabidopsis thaliana HOM05D000361 ORTHO05D004243 1.9e-56 223.0 187 64.2
Hund09630 Selenicereus undatus HOM05D000361 ORTHO05D004243 1.9e-56 223.0 173 67.6
AL6G51220 Arabidopsis lyrata HOM05D000361 ORTHO05D004243 3.3e-56 222.2 187 63.6
COL.COLO4_23233 Corchorus olitorius HOM05D000361 ORTHO05D004243 3.3e-56 222.2 188 63.8
FvH4_5g39210 Fragaria vesca HOM05D000361 ORTHO05D004243 3.3e-56 222.2 188 66.0
Sp6g01910 Schrenkiella parvula HOM05D000361 ORTHO05D004243 4.3e-56 221.9 187 65.2
Os03g0737800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D004243 7.3e-56 221.1 184 63.6
Oeu008471.2 Olea europaea HOM05D000361 ORTHO05D004243 1.3e-55 220.3 157 74.5
THA.LOC104799236 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 2.1e-55 219.5 188 67.0
Ah.10g031040 Amaranthus hybridus HOM05D000361 ORTHO05D004243 3.6e-55 218.8 188 64.4
THA.LOC104801306 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 6.2e-55 218.0 188 66.5
ClCG10G006350 Citrullus lanatus HOM05D000361 ORTHO05D004243 8.1e-55 217.6 188 62.8
ClCG07G000710 Citrullus lanatus HOM05D000361 ORTHO05D004243 1.8e-54 216.5 157 71.3
RcHm_v2.0_Chr7g0241471 Rosa chinensis HOM05D000361 ORTHO05D004243 3.1e-54 215.7 188 64.4
AUR62011807 Chenopodium quinoa HOM05D000361 ORTHO05D004243 4.0e-54 215.3 188 63.3
Peaxi162Scf00691g00222 Petunia axillaris HOM05D000361 ORTHO05D004243 5.3e-54 214.9 154 72.7
Aa31LG5G1680 Aethionema arabicum HOM05D000361 ORTHO05D004243 6.9e-54 214.5 188 62.8
Nitab4.5_0001301g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 6.9e-54 214.5 188 64.4
AUR62024653 Chenopodium quinoa HOM05D000361 ORTHO05D004243 2.6e-53 212.6 188 62.2
Lalb_Chr06g0166851 Lupinus albus HOM05D000361 ORTHO05D004243 2.6e-53 212.6 185 64.9
SGA_v2.0_scaffold36G14324 Striga asiatica HOM05D000361 ORTHO05D004243 2.2e-52 209.5 188 63.3
Sabra14G0089600 Salix brachista HOM05D000361 ORTHO05D005006 2.9e-52 209.1 188 63.3
EL10As5g23529 Beta vulgaris HOM05D000361 ORTHO05D004243 6.4e-52 208.0 188 62.8
SalBow2G3626 Salvia bowleyana HOM05D000361 ORTHO05D004243 6.4e-52 208.0 190 60.0
Migut.N00925 Erythranthe guttata HOM05D000361 ORTHO05D004243 5.4e-51 204.9 189 62.4
HanXRQChr15g0464131 Helianthus annuus HOM05D000361 ORTHO05D004243 2.1e-50 203.0 186 63.4
Aqoxy328s001 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 2.7e-50 202.6 186 61.8
ECA236G0422 Erigeron canadensis HOM05D000361 ORTHO05D005006 6.0e-50 201.4 185 62.7
FAN08G2818 Fragaria x ananassa HOM05D000361 ORTHO05D004243 1.3e-49 200.3 188 61.2
Sabra02G0160700 Salix brachista HOM05D000361 ORTHO05D004243 1.3e-49 200.3 158 66.5
A09p01480 Brassica napus HOM05D000361 ORTHO05D004243 1.7e-49 199.9 187 61.5
BraA09t35809Z Brassica rapa HOM05D000361 ORTHO05D004243 1.7e-49 199.9 187 61.5
BcaC04g24028 Brassica carinata HOM05D000361 ORTHO05D004243 6.6e-49 198.0 187 61.0
C09p01600 Brassica napus HOM05D000361 ORTHO05D004243 6.6e-49 198.0 187 61.0
BolC9t53093H Brassica oleracea HOM05D000361 ORTHO05D004243 6.6e-49 198.0 187 61.0
HPP92_004593 Vanilla planifolia HOM05D000361 ORTHO05D004243 1.9e-48 196.4 197 56.3
BcaB01g02087 Brassica carinata HOM05D000361 ORTHO05D004243 2.5e-48 196.1 187 61.0
Lj1g0012423 Lotus japonicus HOM05D000361 ORTHO05D004243 8.1e-47 191.0 188 58.0
Cc03_g12210 Coffea canephora HOM05D000361 ORTHO05D004243 1.4e-46 190.3 111 90.1
FAN18G4464 Fragaria x ananassa HOM05D000361 ORTHO05D004243 1.4e-46 190.3 157 65.0
Oeu041216.1 Olea europaea HOM05D000361 ORTHO05D004243 3.1e-46 189.1 157 65.6
arahy.Tifrunner.gnm1.ann1.KULZ0F Arachis hypogaea HOM05D000361 ORTHO05D004243 5.8e-45 184.9 181 59.7
FAN04G1824 Fragaria x ananassa HOM05D000361 ORTHO05D004243 2.9e-44 182.6 200 57.0
unitig_736.g22938 Utricularia gibba HOM05D000361 ORTHO05D004243 4.9e-44 181.8 157 62.4
arahy.Tifrunner.gnm1.ann1.66RZQ8 Arachis hypogaea HOM05D000361 ORTHO05D004243 4.2e-43 178.7 187 57.2
AagrBONN_evm.TU.Sc2ySwM_228.3730 Anthoceros agrestis HOM05D000361 ORTHO05D004243 2.7e-42 176.0 186 52.2
Psat3g020160 Pisum sativum HOM05D000361 ORTHO05D004243 1.3e-41 173.7 189 55.6
VMungo1383G3239 Vigna mungo HOM05D000361 ORTHO05D004243 4.3e-40 168.7 160 58.1
Cc00_g34370 Coffea canephora HOM05D000361 ORTHO05D004243 4.5e-37 158.7 94 88.3
TPR.G4118 Trifolium pratense HOM05D000361 ORTHO05D004243 4.9e-36 155.2 193 48.7
Lj2A1205T44 Lonicera japonica HOM05D000361 ORTHO05D004243 5.5e-35 151.8 244 45.1
Pp3c12_23510 Physcomitrium patens HOM05D000361 ORTHO05D004243 5.5e-35 151.8 191 44.5
Mapoly0167s0022 Marchantia polymorpha HOM05D000361 ORTHO05D004243 7.1e-35 151.4 194 45.4
CDE05G1119 Ceratophyllum demersum HOM05D001444 ORTHO05D003766 1.3e-33 147.1 155 54.2
Sc05g0000420 Simmondsia chinensis HOM05D000361 ORTHO05D004243 1.8e-33 146.7 108 66.7
Lsat_1_v5_gn_1_35460 Lactuca sativa HOM05D000361 ORTHO05D004243 5.1e-33 145.2 191 50.3
Zm00001eb056500 Zea mays HOM05D000361 ORTHO05D004243 5.1e-33 145.2 184 47.8
SMO116G0335 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 2.5e-32 142.9 187 47.1
SMO195G0031 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 2.5e-32 142.9 187 47.1
Pp3c3_36800 Physcomitrium patens HOM05D000361 ORTHO05D004243 8.4e-28 127.9 191 39.8
Lalb_Chr15g0078161 Lupinus albus HOM05D000361 ORTHO05D004243 1.2e-26 124.0 110 60.9
DCAR_005760 Daucus carota HOM05D000361 ORTHO05D004243 4.6e-26 122.1 115 56.5
Oeu049914.1 Olea europaea HOM05D000361 ORTHO05D004243 5.7e-24 115.2 117 53.0
Cc00_g34360 Coffea canephora HOM05D000361 ORTHO05D004243 7.4e-24 114.8 70 85.7
CBR_g48220 Chara braunii HOM05D000361 ORTHO05D004243 1.3e-23 114.0 240 32.5
COL.COLO4_26725 Corchorus olitorius HOM05D000361 ORTHO05D004243 3.1e-22 109.4 96 54.2
BcaC04g24029 Brassica carinata HOM05D000361 ORTHO05D004243 6.1e-18 95.1 116 50.9
Actinidia04687 Actinidia chinensis HOM05D000361 ORTHO05D004243 6.3e-15 85.1 68 66.2
Actinidia27762 Actinidia chinensis HOM05D000361 ORTHO05D004243 6.3e-15 85.1 68 66.2
SEGI_09541 Sequoiadendron giganteum HOM05D000361 ORTHO05D004243 4.1e-14 82.4 71 62.0
Lalb_Chr15g0078171 Lupinus albus HOM05D000361 ORTHO05D004243 6.9e-14 81.6 76 60.5
Glyma.19G216151 Glycine max HOM05D000361 ORTHO05D004243 9.1e-14 81.3 88 54.5
Dinv10096 Davidia involucrata HOM05D000361 ORTHO05D004243 1.2e-13 80.9 55 76.4
Actinidia04728 Actinidia chinensis HOM05D000361 ORTHO05D004243 7.2e-11 71.6 56 64.3
Phvul.001G212700 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 6.1e-10 68.6 66 56.1
SHI15042 Sapria himalayana HOM05D000361 ORTHO05D004243 1.1e-08 64.3 80 48.8
Dinv10095 Davidia involucrata HOM05D000361 ORTHO05D004243 1.1e-06 57.8 36 80.6
Cre09.g404650 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D004243 9.1e-06 54.7 130 29.2


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