Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 2.6e-115 418.7 207 100.0
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 3.1e-15 86.3 49 81.6
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 6.8e-15 85.1 134 45.5
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.5e-14 84.0 111 47.7
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 2.0e-14 83.6 118 45.8
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 2.0e-14 83.6 54 68.5
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 2.6e-14 83.2 125 43.2
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 3.4e-14 82.8 126 42.9
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 4.4e-14 82.4 104 43.3
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 1.3e-13 80.9 95 45.3
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 2.2e-13 80.1 57 70.2
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 2.2e-13 80.1 112 42.0
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 2.9e-13 79.7 82 50.0
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 2.9e-13 79.7 99 43.4
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 4.9e-13 79.0 85 44.7
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 1.1e-12 77.8 86 46.5
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 1.4e-12 77.4 114 44.7
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.4e-12 77.4 114 41.2
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 1.4e-12 77.4 72 54.2
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 4.2e-12 75.9 125 41.6
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 5.4e-12 75.5 114 43.9
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 5.4e-12 75.5 73 50.7
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 7.1e-12 75.1 122 42.6
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 9.2e-12 74.7 122 42.6
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 9.2e-12 74.7 70 54.3
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 1.2e-11 74.3 69 50.7
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 1.2e-11 74.3 78 47.4
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 1.6e-11 73.9 116 44.8
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 2.1e-11 73.6 47 68.1
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 2.7e-11 73.2 130 34.6
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.7e-11 73.2 120 40.0
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 2.7e-11 73.2 86 43.0
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 3.5e-11 72.8 72 50.0
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 3.5e-11 72.8 94 45.7
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 4.6e-11 72.4 119 37.8
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 4.6e-11 72.4 75 50.7
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 4.6e-11 72.4 52 61.5
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 6.0e-11 72.0 127 39.4
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 6.0e-11 72.0 103 44.7
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 1.0e-10 71.2 98 42.9
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 1.3e-10 70.9 72 48.6
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 1.7e-10 70.5 49 63.3
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 1.7e-10 70.5 113 43.4
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 1.7e-10 70.5 108 42.6
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 2.3e-10 70.1 68 50.0
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 5.1e-10 68.9 76 43.4
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.5e-09 67.4 116 36.2
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 1.5e-09 67.4 67 49.3
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 1.5e-09 67.4 137 35.8
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 2.5e-09 66.6 69 47.8
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 2.5e-09 66.6 121 40.5
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 3.3e-09 66.2 121 34.7
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 5.6e-09 65.5 131 37.4
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 7.3e-09 65.1 116 34.5
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 1.2e-08 64.3 68 48.5
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 2.8e-08 63.2 97 44.3
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 4.7e-08 62.4 66 47.0
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 4.7e-08 62.4 68 47.1
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 4.7e-08 62.4 68 47.1
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 4.7e-08 62.4 62 53.2
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 1.4e-07 60.8 69 46.4
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 1.8e-07 60.5 68 45.6
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 1.8e-07 60.5 63 49.2
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 1.8e-07 60.5 75 40.0
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 2.4e-07 60.1 68 45.6
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 2.4e-07 60.1 68 45.6
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 3.1e-07 59.7 68 45.6
Hma1.2p1_0933F.1_g238390 Hydrangea macrophylla HOM05D006757 ORTHO05D034208 3.1e-07 59.7 86 43.0
vmacro10766 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 5.3e-07 58.9 40 70.0
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 9.0e-07 58.2 91 39.6
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 9.0e-07 58.2 135 37.0
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 2.0e-06 57.0 63 49.2
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 2.6e-06 56.6 76 39.5
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 3.4e-06 56.2 68 41.2
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 4.4e-06 55.8 63 47.6
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 7.6e-06 55.1 90 38.9


User provided reference genes

Program Settings