Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g02820 Coffea canephora HOM05D007144 ORTHO05D008709 8.1e-45 184.1 154 100.0
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 5.1e-23 111.7 154 76.6
Dinv36172 Davidia involucrata HOM05D007144 ORTHO05D008709 1.9e-22 109.8 96 63.5
SalBow5G2895 Salvia bowleyana HOM05D007144 ORTHO05D008709 4.3e-22 108.6 75 74.7
Duzib168G0692 Durio zibethinus HOM05D007144 ORTHO05D008709 5.3e-20 101.7 87 67.8
MD03G1167000 Malus domestica HOM05D007144 ORTHO05D008709 5.3e-20 101.7 85 64.7
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 2.6e-19 99.4 68 79.4
THA.LOC104799122 Tarenaya hassleriana HOM05D007144 ORTHO05D008709 2.6e-19 99.4 82 64.6
SGA_v2.0_scaffold43G16444 Striga asiatica HOM05D007144 ORTHO05D008709 4.4e-19 98.6 71 70.4
Nitab4.5_0003882g0010 Nicotiana tabacum HOM05D007144 ORTHO05D008709 5.8e-19 98.2 154 71.4
CiPaw.13G151300 Carya illinoinensis HOM05D007144 ORTHO05D008709 7.6e-19 97.8 73 72.6
HPP92_013978 Vanilla planifolia HOM05D007144 ORTHO05D008709 1.3e-18 97.1 87 62.1
Solyc04g008580.3 Solanum lycopersicum HOM05D007144 ORTHO05D008709 4.9e-18 95.1 154 72.1
Nitab4.5_0000129g0400 Nicotiana tabacum HOM05D007144 ORTHO05D008709 8.4e-18 94.4 154 69.5
Sopen04g003740 Solanum pennellii HOM05D007144 ORTHO05D008709 8.4e-18 94.4 154 71.4
PGSC0003DMG400031376 Solanum tuberosum HOM05D007144 ORTHO05D008709 8.4e-18 94.4 154 71.4
Migut.O00557 Erythranthe guttata HOM05D007144 ORTHO05D008709 1.1e-17 94.0 156 71.2
Gohir.D07G124200 Gossypium hirsutum HOM05D007144 ORTHO05D008709 1.1e-17 94.0 73 71.2
Gorai.001G134000 Gossypium raimondii HOM05D007144 ORTHO05D008709 1.1e-17 94.0 73 71.2
Peaxi162Scf00329g00929 Petunia axillaris HOM05D007144 ORTHO05D008709 1.4e-17 93.6 73 68.5
Prupe.4G267400 Prunus persica HOM05D007144 ORTHO05D008709 1.4e-17 93.6 71 67.6
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 1.9e-17 93.2 69 73.9
Potri.009G070700 Populus trichocarpa HOM05D007144 ORTHO05D008709 4.2e-17 92.0 72 68.1
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 4.2e-17 92.0 73 68.5
Atru.chr3.2764 Acer truncatum HOM05D007144 ORTHO05D008709 1.2e-16 90.5 73 68.5
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 1.6e-16 90.1 79 67.1
CAN.G880.2 Capsicum annuum HOM05D007144 ORTHO05D008709 2.7e-16 89.4 75 64.0
MBI13_g27793_MAGBIO Magnolia biondii HOM05D007144 ORTHO05D008709 2.7e-16 89.4 72 68.1
Thecc.09G249300 Theobroma cacao HOM05D007144 ORTHO05D008709 3.5e-16 89.0 73 68.5
Ah.06g194530 Amaranthus hybridus HOM05D007144 ORTHO05D008709 4.6e-16 88.6 87 59.8
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 4.6e-16 88.6 58 72.4
Potri.001G276100 Populus trichocarpa HOM05D007144 ORTHO05D008709 4.6e-16 88.6 71 67.6
MD11G1186200 Malus domestica HOM05D007144 ORTHO05D008709 6.0e-16 88.2 52 84.6
Hund07439 Selenicereus undatus HOM05D007144 ORTHO05D008709 6.0e-16 88.2 73 64.4
Ciclev10017489m.g Citrus clementina HOM05D007144 ORTHO05D008709 7.9e-16 87.8 60 73.3
Actinidia06960 Actinidia chinensis HOM05D007144 ORTHO05D008709 1.0e-15 87.4 63 73.0
Manes.02G140201 Manihot esculenta HOM05D007144 ORTHO05D008709 1.3e-15 87.0 66 72.7
Haze_23224 Corylus avellana HOM05D007144 ORTHO05D008709 2.3e-15 86.3 65 72.3
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 3.0e-15 85.9 68 70.6
Aqoxy1G00362 Aquilegia oxysepala HOM05D007144 ORTHO05D008709 5.1e-15 85.1 72 66.7
Haze_03594 Corylus avellana HOM05D007144 ORTHO05D008709 6.6e-15 84.7 65 70.8
HanXRQChr17g0535301 Helianthus annuus HOM05D007144 ORTHO05D008709 6.6e-15 84.7 72 63.9
Cfa010657 Carpinus fangiana HOM05D007144 ORTHO05D008709 8.7e-15 84.3 65 72.3
Thhalv10014957m.g Eutrema salsugineum HOM05D007144 ORTHO05D008709 8.7e-15 84.3 59 71.2
FAN19G1536 Fragaria x ananassa HOM05D007144 ORTHO05D008709 8.7e-15 84.3 56 73.2
Sabra09G0053500 Salix brachista HOM05D007144 ORTHO05D008709 8.7e-15 84.3 71 64.8
Sc06g0004670 Simmondsia chinensis HOM05D007144 ORTHO05D008709 8.7e-15 84.3 73 63.0
EL10Ac4g10148 Beta vulgaris HOM05D007144 ORTHO05D008709 1.5e-14 83.6 73 61.6
Carub.0006s1083 Capsella rubella HOM05D007144 ORTHO05D008709 1.5e-14 83.6 56 73.2
FvH4_1g25870 Fragaria vesca HOM05D007144 ORTHO05D008709 1.5e-14 83.6 71 64.8
FAN23G1846 Fragaria x ananassa HOM05D007144 ORTHO05D008709 1.5e-14 83.6 71 64.8
unitig_749.g14354 Utricularia gibba HOM05D007144 ORTHO05D008709 1.5e-14 83.6 62 64.5
RcHm_v2.0_Chr3g0485011 Rosa chinensis HOM05D007144 ORTHO05D008709 1.9e-14 83.2 71 63.4
Manes.01G179700 Manihot esculenta HOM05D007144 ORTHO05D008709 2.5e-14 82.8 64 71.9
AL6G23120 Arabidopsis lyrata HOM05D007144 ORTHO05D008709 3.3e-14 82.4 73 61.6
DCAR_023846 Daucus carota HOM05D007144 ORTHO05D008709 3.3e-14 82.4 71 60.6
FAN26G3363 Fragaria x ananassa HOM05D007144 ORTHO05D008709 3.3e-14 82.4 71 63.4
Sp6g31320 Schrenkiella parvula HOM05D007144 ORTHO05D008709 4.3e-14 82.0 55 74.5
AT5G12320 Arabidopsis thaliana HOM05D007144 ORTHO05D008709 5.6e-14 81.6 73 61.6
Lsat_1_v5_gn_2_34061 Lactuca sativa HOM05D007144 ORTHO05D008709 5.6e-14 81.6 69 65.2
AUR62006537 Chenopodium quinoa HOM05D007144 ORTHO05D008709 7.3e-14 81.3 73 58.9
CARHR200790 Cardamine hirsuta HOM05D007144 ORTHO05D008709 1.3e-13 80.5 55 72.7
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 1.6e-13 80.1 66 68.2
Medtr3g088410 Medicago truncatula HOM05D007144 ORTHO05D008709 1.6e-13 80.1 71 56.3
TAR623G0360 Trochodendron aralioides HOM05D007144 ORTHO05D008709 1.6e-13 80.1 66 72.7
ATR0745G069 Amborella trichopoda HOM05D007144 ORTHO05D008709 2.1e-13 79.7 66 59.1
arahy.Tifrunner.gnm1.ann1.FNNB0Q Arachis hypogaea HOM05D007144 ORTHO05D008709 2.1e-13 79.7 69 65.2
arahy.Tifrunner.gnm1.ann1.J3HRR4 Arachis hypogaea HOM05D007144 ORTHO05D008709 2.1e-13 79.7 69 65.2
Atru.chr4.1901 Acer truncatum HOM05D007144 ORTHO05D008709 2.8e-13 79.3 87 55.2
Sed0028076 Sechium edule HOM05D007144 ORTHO05D008709 2.8e-13 79.3 61 67.2
arahy.Tifrunner.gnm1.ann1.A9WCXI Arachis hypogaea HOM05D007144 ORTHO05D008709 3.6e-13 79.0 71 62.0
A10p25500 Brassica napus HOM05D007144 ORTHO05D008709 3.6e-13 79.0 56 67.9
C09p64580 Brassica napus HOM05D007144 ORTHO05D008709 3.6e-13 79.0 56 67.9
BolC9t59291H Brassica oleracea HOM05D007144 ORTHO05D008709 3.6e-13 79.0 56 67.9
BraA10t44614Z Brassica rapa HOM05D007144 ORTHO05D008709 3.6e-13 79.0 56 67.9
ECA236G5047 Erigeron canadensis HOM05D007144 ORTHO05D008709 6.2e-13 78.2 79 51.9
TPR.G13466 Trifolium pratense HOM05D007144 ORTHO05D008709 8.1e-13 77.8 71 60.6
CDE04G3392 Ceratophyllum demersum HOM05D000144 ORTHO05D007336 1.4e-12 77.0 60 65.0
Ca_03986_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 1.8e-12 76.6 65 63.1
Zm00001eb329760 Zea mays HOM05D007144 ORTHO05D008709 2.4e-12 76.3 75 52.0
Glyma.08G150200 Glycine max HOM05D007144 ORTHO05D008709 3.1e-12 75.9 66 62.1
CsaV3_6G039020 Cucumis sativus L. HOM05D007144 ORTHO05D008709 4.0e-12 75.5 71 53.5
Lj6g0012120 Lotus japonicus HOM05D007144 ORTHO05D008709 4.0e-12 75.5 65 61.5
Rhsim13G0210700 Rhododendron simsii HOM05D007144 ORTHO05D008709 4.0e-12 75.5 63 71.4
Eucgr.B03730 Eucalyptus grandis HOM05D007144 ORTHO05D008709 1.5e-11 73.6 63 61.9
AUR62000186 Chenopodium quinoa HOM05D007144 ORTHO05D008709 2.6e-11 72.8 73 56.2
MELO3C014563.2 Cucumis melo HOM05D007144 ORTHO05D008709 2.6e-11 72.8 68 54.4
Aa31LG3G14910 Aethionema arabicum HOM05D007144 ORTHO05D008709 7.6e-11 71.2 49 71.4
Ca_12164_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 1.7e-10 70.1 56 66.1
CANSAT54G2482 Cannabis sativa HOM05D007144 ORTHO05D008709 1.9e-09 66.6 65 58.5
GSVIVG01037268001 Vitis vinifera HOM05D007144 ORTHO05D008709 3.2e-09 65.9 51 64.7
ClCG02G022890 Citrullus lanatus HOM05D007144 ORTHO05D008709 9.3e-09 64.3 165 59.4
QL01p017309 Quercus lobata HOM05D007144 ORTHO05D008709 9.3e-09 64.3 68 54.4
CBR_g48945 Chara braunii HOM05D007144 ORTHO05D008709 1.6e-08 63.5 69 49.3
Phvul.006G021300 Phaseolus vulgaris HOM05D007144 ORTHO05D008709 2.7e-08 62.8 41 68.3
Psat1g051560 Pisum sativum HOM05D007144 ORTHO05D008709 3.5e-08 62.4 62 59.7
TWI23G1223 Tripterygium wilfordii HOM05D007144 ORTHO05D008709 7.9e-08 61.2 60 61.7
Nn7g36693 Nelumbo nucifera HOM05D007144 ORTHO05D008709 1.8e-07 60.1 52 61.5
SMO164G0043 Selaginella moellendorffii HOM05D007144 ORTHO05D008709 2.3e-07 59.7 83 42.2
Mapoly0026s0092 Marchantia polymorpha HOM05D007144 ORTHO05D008709 5.1e-07 58.5 56 51.8
PGR102G1924 Punica granatum HOM05D007144 ORTHO05D008709 1.5e-06 57.0 59 52.5
Lj1A285T18 Lonicera japonica HOM05D007144 ORTHO05D008709 9.6e-06 54.3 32 84.4
Lalb_Chr18g0054451 Lupinus albus HOM05D007144 ORTHO05D008709 9.6e-06 54.3 42 64.3


User provided reference genes

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