Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 1.9e-137 492.7 274 100.0
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 7.5e-86 321.2 222 73.9
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 1.1e-84 317.4 222 73.9
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 2.4e-84 316.2 219 79.9
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 5.4e-84 315.1 241 69.7
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 9.2e-84 314.3 220 74.5
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 1.2e-83 313.9 222 73.9
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 1.6e-83 313.5 220 74.1
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 2.7e-83 312.8 207 78.7
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 3.5e-83 312.4 218 72.9
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 4.6e-83 312.0 222 73.0
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 4.6e-83 312.0 222 73.4
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 5.9e-83 311.6 221 74.7
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 1.3e-82 310.5 222 73.0
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 1.7e-82 310.1 222 72.1
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 6.6e-82 308.1 222 77.9
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 1.1e-81 307.4 220 72.7
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 1.5e-81 307.0 222 73.0
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 1.5e-81 307.0 222 72.5
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 1.9e-81 306.6 224 71.9
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 3.3e-81 305.8 222 73.0
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 3.3e-81 305.8 221 72.4
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 3.3e-81 305.8 220 71.4
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 4.3e-81 305.4 231 68.0
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 5.6e-81 305.1 221 71.0
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 7.3e-81 304.7 228 71.9
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 9.5e-81 304.3 212 74.1
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.2e-80 303.9 217 70.5
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 2.1e-80 303.1 222 71.2
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 2.8e-80 302.8 222 69.8
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 3.6e-80 302.4 223 71.7
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 3.6e-80 302.4 198 78.8
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 4.7e-80 302.0 217 74.2
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 4.7e-80 302.0 217 76.0
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 4.7e-80 302.0 217 74.2
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 4.7e-80 302.0 217 74.2
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 1.1e-79 300.8 222 76.6
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 1.4e-79 300.4 217 73.7
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 1.4e-79 300.4 217 75.6
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 1.4e-79 300.4 226 70.8
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 1.4e-79 300.4 228 69.3
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 4.0e-79 298.9 225 68.9
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 6.8e-79 298.1 218 73.9
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 8.9e-79 297.7 219 69.9
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 8.9e-79 297.7 224 71.0
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 8.9e-79 297.7 219 69.4
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 1.5e-78 297.0 217 68.7
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 1.5e-78 297.0 222 69.4
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 3.4e-78 295.8 217 68.7
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 4.4e-78 295.4 222 70.3
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 5.8e-78 295.0 184 82.1
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 7.5e-78 294.7 218 71.1
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 9.8e-78 294.3 225 68.0
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 9.8e-78 294.3 221 70.6
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 9.8e-78 294.3 218 71.1
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.3e-77 293.9 227 68.7
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 1.7e-77 293.5 220 66.8
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 1.7e-77 293.5 221 69.2
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 3.7e-77 292.4 228 68.9
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 4.9e-77 292.0 222 67.6
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 8.3e-77 291.2 222 70.3
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 1.1e-76 290.8 230 67.8
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.1e-76 290.8 221 68.3
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 1.4e-76 290.4 226 68.6
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 2.4e-76 289.7 214 70.6
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 2.4e-76 289.7 227 69.2
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 2.4e-76 289.7 235 65.5
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 3.2e-76 289.3 199 75.4
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 9.2e-76 287.7 202 70.8
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 9.2e-76 287.7 221 70.6
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 3.5e-75 285.8 224 68.3
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 6.0e-75 285.0 202 70.3
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 7.8e-75 284.6 221 67.9
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 1.7e-74 283.5 262 65.3
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 3.0e-74 282.7 214 68.7
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 1.9e-73 280.0 258 67.4
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.6e-72 276.9 245 61.6
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 8.9e-71 271.2 178 74.2
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 1.2e-70 270.8 199 72.4
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 1.5e-70 270.4 222 63.5
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 3.4e-70 269.2 221 63.8
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 9.9e-70 267.7 222 67.1
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 9.2e-68 261.2 246 59.8
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.6e-67 260.4 222 63.5
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 3.9e-66 255.8 211 65.9
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 6.6e-66 255.0 193 67.9
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 2.5e-65 253.1 222 60.4
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 5.2e-63 245.4 228 61.8
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 9.9e-62 241.1 220 58.2
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 1.7e-61 240.4 220 59.1
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 8.4e-61 238.0 207 61.4
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 1.1e-60 237.7 227 58.1
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 4.1e-60 235.7 243 56.8
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 9.2e-60 234.6 271 59.4
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 2.1e-59 233.4 221 60.2
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 1.1e-55 221.1 206 61.2
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 4.9e-53 212.2 217 54.4
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 3.2e-52 209.5 153 76.5
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 8.7e-50 201.4 208 55.3
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 6.9e-47 191.8 153 66.0
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 1.5e-46 190.7 223 50.7
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 5.8e-46 188.7 157 62.4
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 9.9e-46 188.0 227 50.7
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 1.2e-38 164.5 218 46.3
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 1.3e-37 161.0 143 56.6
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 3.2e-36 156.4 201 51.2
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 3.2e-36 156.4 120 66.7
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.1e-33 147.9 122 76.2
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 1.1e-31 141.4 199 44.7
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 3.4e-30 136.3 131 53.4
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 1.4e-28 131.0 390 30.3
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 4.6e-27 125.9 85 77.6
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 1.8e-26 124.0 84 69.0
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 3.8e-21 106.3 141 44.7
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 2.5e-20 103.6 70 71.4
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 2.3e-18 97.1 51 90.2
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 2.3e-18 97.1 64 81.2
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 7.4e-17 92.0 51 86.3
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 6.3e-16 89.0 62 71.0
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 6.3e-16 89.0 68 69.1
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 3.1e-15 86.7 65 70.8
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 7.2e-12 75.5 91 51.6
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.2e-11 74.7 187 30.5
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.6e-11 74.3 58 69.0
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 4.4e-09 66.2 81 44.4
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 5.3e-07 59.3 50 60.0
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.5e-06 57.8 40 70.0


User provided reference genes

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