Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g02380 Coffea canephora HOM05D008552 ORTHO05D010745 1.2e-130 469.9 259 100.0
Actinidia12231 Actinidia chinensis HOM05D008552 ORTHO05D010745 2.7e-53 213.0 252 51.2
Potri.005G135700 Populus trichocarpa HOM05D008552 ORTHO05D010745 2.5e-51 206.5 250 50.4
Manes.13G125700 Manihot esculenta HOM05D008552 ORTHO05D010745 3.3e-51 206.1 220 55.0
Hma1.2p1_0047F.1_g027720 Hydrangea macrophylla HOM05D008552 ORTHO05D010745 1.1e-46 191.0 224 53.1
Prupe.7G137300 Prunus persica HOM05D008552 ORTHO05D010745 9.4e-46 188.0 250 46.8
ECA246G1147 Erigeron canadensis HOM05D008552 ORTHO05D010745 1.6e-45 187.2 216 51.9
FAN26G2968 Fragaria x ananassa HOM05D008552 ORTHO05D010745 1.4e-44 184.1 238 46.6
Thecc.01G051600 Theobroma cacao HOM05D008552 ORTHO05D010745 1.4e-44 184.1 213 49.8
FAN19G2593 Fragaria x ananassa HOM05D008552 ORTHO05D010745 5.1e-44 182.2 238 46.6
FvH4_1g15570 Fragaria vesca HOM05D008552 ORTHO05D010745 1.1e-43 181.0 238 46.6
FAN28G1904 Fragaria x ananassa HOM05D008552 ORTHO05D010745 5.7e-43 178.7 243 44.9
FAN23G0622 Fragaria x ananassa HOM05D008552 ORTHO05D010745 2.2e-42 176.8 238 45.8
COL.COLO4_11369 Corchorus olitorius HOM05D008552 ORTHO05D010745 4.8e-42 175.6 210 49.5
Lsat_1_v5_gn_3_91661 Lactuca sativa HOM05D008552 ORTHO05D010745 3.1e-41 172.9 251 45.0
MBI06_g07361_MAGBIO Magnolia biondii HOM05D008552 ORTHO05D010745 5.3e-41 172.2 240 45.0
DCAR_010919 Daucus carota HOM05D008552 ORTHO05D010745 9.1e-41 171.4 209 47.8
HanXRQChr12g0379281 Helianthus annuus HOM05D008552 ORTHO05D010745 3.2e-38 162.9 251 44.6
Oeu050753.1 Olea europaea HOM05D008552 ORTHO05D010745 1.2e-37 161.0 208 48.1
Lj4g0011398 Lotus japonicus HOM05D008552 ORTHO05D010745 2.1e-37 160.2 224 43.3
Migut.H00461 Erythranthe guttata HOM05D008552 ORTHO05D010745 1.5e-35 154.1 216 45.4
Psat0s3507g0040 Pisum sativum HOM05D008552 ORTHO05D010745 4.4e-35 152.5 252 38.9
Phvul.003G246300 Phaseolus vulgaris HOM05D008552 ORTHO05D010745 1.7e-34 150.6 238 41.6
Actinidia16511 Actinidia chinensis HOM05D008552 ORTHO05D010745 2.2e-34 150.2 230 43.0
PGR102G2623 Punica granatum HOM05D008552 ORTHO05D010745 3.7e-34 149.4 236 42.4
DCAR_010918 Daucus carota HOM05D008552 ORTHO05D010745 8.2e-34 148.3 218 43.1
VMungo0251G1275 Vigna mungo HOM05D008552 ORTHO05D010745 8.2e-34 148.3 238 41.2
Manes.13G125400 Manihot esculenta HOM05D008552 ORTHO05D010745 1.6e-32 144.1 228 43.0
Ca_22194_v3 Cicer arietinum L. HOM05D008552 ORTHO05D010745 1.1e-30 137.9 225 39.1
TPR.G19004 Trifolium pratense HOM05D008552 ORTHO05D010745 1.9e-30 137.1 220 41.4
DCAR_025711 Daucus carota HOM05D000369 ORTHO05D000253 5.5e-30 135.6 250 37.2
Atru.chr3.410 Acer truncatum HOM05D008552 ORTHO05D010745 9.4e-30 134.8 244 41.4
Gohir.D12G089000 Gossypium hirsutum HOM05D008552 ORTHO05D010745 8.0e-29 131.7 248 37.9
Gorai.008G074000 Gossypium raimondii HOM05D008552 ORTHO05D010745 1.0e-28 131.3 248 37.9
Dinv36925 Davidia involucrata HOM05D008552 ORTHO05D010745 2.0e-27 127.1 137 56.2
Gohir.A12G082600 Gossypium hirsutum HOM05D008552 ORTHO05D010745 2.2e-26 123.6 248 36.7
Aqoxy5G01300 Aquilegia oxysepala HOM05D008552 ORTHO05D010745 2.4e-25 120.2 229 37.1
Cfa003989 Carpinus fangiana HOM05D008552 ORTHO05D010745 9.1e-25 118.2 251 39.8
Cpa.g.sc6.385 Carica papaya HOM05D008552 ORTHO05D010745 1.7e-23 114.0 232 37.5
Haze_15435 Corylus avellana HOM05D008552 ORTHO05D010745 2.9e-23 113.2 212 40.1
Dinv29960 Davidia involucrata HOM05D008552 ORTHO05D010745 7.2e-22 108.6 142 49.3
Eucgr.H01996 Eucalyptus grandis HOM05D008552 ORTHO05D010745 2.7e-21 106.7 224 36.6
Dinv24942 Davidia involucrata HOM05D008552 ORTHO05D000073 5.2e-20 102.4 124 47.6
Medtr8g079700 Medicago truncatula HOM05D008552 ORTHO05D010745 4.1e-17 92.8 210 32.4
QL03p002405 Quercus lobata HOM05D008552 ORTHO05D010745 3.5e-16 89.7 252 32.1
Dinv39883 Davidia involucrata HOM05D008552 ORTHO05D010745 3.8e-15 86.3 221 33.9
CiPaw.01G022400 Carya illinoinensis HOM05D008552 ORTHO05D010745 1.1e-14 84.7 256 31.6
Glyma.05G080700 Glycine max HOM05D008552 ORTHO05D010745 5.5e-14 82.4 249 30.1
Ciclev10027149m.g Citrus clementina HOM05D008552 ORTHO05D010745 2.0e-11 73.9 229 33.2
arahy.Tifrunner.gnm1.ann1.A84CEX Arachis hypogaea HOM05D008552 ORTHO05D010745 3.7e-10 69.7 225 31.6
Actinidia16510 Actinidia chinensis HOM05D000369 ORTHO05D010745 4.5e-08 62.8 71 54.9


User provided reference genes

Program Settings