Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 1.8e-293 1011.9 522 100.0
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 1.6e-57 228.0 460 36.3
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 4.8e-57 226.5 523 33.3
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 9.4e-53 212.2 454 37.4
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 1.3e-49 201.8 538 32.0
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 1.1e-48 198.7 498 33.3
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 2.0e-47 194.5 523 32.1
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 1.9e-45 188.0 522 31.8
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 4.2e-45 186.8 436 35.6
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 7.2e-45 186.0 524 30.5
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 1.2e-44 185.3 500 33.4
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 2.7e-44 184.1 527 29.8
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 4.7e-44 183.3 462 33.1
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 4.7e-44 183.3 549 31.0
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 3.0e-43 180.6 582 31.8
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 4.4e-42 176.8 400 34.5
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 5.7e-42 176.4 538 33.3
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 1.8e-40 171.4 518 29.2
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 2.4e-40 171.0 549 30.2
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 3.1e-40 170.6 604 30.8
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 5.3e-40 169.9 367 36.0
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 7.0e-40 169.5 508 32.1
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 7.0e-40 169.5 382 34.6
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 9.1e-40 169.1 518 29.7
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 2.6e-39 167.5 404 32.9
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 7.7e-39 166.0 368 32.9
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 1.0e-38 165.6 504 31.5
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 2.2e-38 164.5 381 32.5
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 5.0e-38 163.3 524 28.8
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 8.5e-38 162.5 525 30.9
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 3.2e-37 160.6 526 28.5
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 2.7e-36 157.5 518 28.8
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 6.1e-36 156.4 545 29.5
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 5.2e-35 153.3 506 28.7
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 8.8e-35 152.5 465 29.5
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 1.1e-34 152.1 478 31.0
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 1.3e-33 148.7 439 32.1
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 1.7e-33 148.3 547 29.3
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 2.8e-33 147.5 524 30.5
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 3.7e-33 147.1 247 39.3
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.8e-32 144.8 413 31.7
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 3.1e-32 144.1 378 32.5
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 2.0e-31 141.4 399 32.3
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 2.6e-31 141.0 485 30.1
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 1.5e-29 135.2 448 29.0
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 1.9e-29 134.8 263 37.6
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 5.5e-29 133.3 410 30.2
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 9.4e-29 132.5 441 28.3
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 1.2e-28 132.1 178 44.4
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 1.8e-27 128.3 177 44.6
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 1.8e-27 128.3 262 36.3
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 1.8e-27 128.3 267 33.0
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 2.3e-27 127.9 177 44.6
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 5.2e-27 126.7 452 26.8
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 1.5e-26 125.2 382 31.7
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 7.5e-26 122.9 214 39.3
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 1.7e-25 121.7 370 30.0
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 2.2e-25 121.3 387 31.0
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 4.8e-25 120.2 372 29.6
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 1.1e-24 119.0 348 31.0
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 2.4e-24 117.9 383 30.5
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 5.4e-24 116.7 236 33.5
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 1.2e-23 115.5 535 27.5
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 4.5e-23 113.6 264 35.2
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 1.3e-22 112.1 177 40.7
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 2.2e-22 111.3 204 39.7
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 3.8e-22 110.5 224 33.0
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 3.8e-22 110.5 209 38.3
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 4.7e-20 103.6 393 25.7
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 8.0e-20 102.8 238 33.6
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 6.8e-19 99.8 202 33.7
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 6.8e-19 99.8 209 35.4
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 6.8e-19 99.8 93 51.6
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 1.2e-18 99.0 389 24.9
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 3.4e-18 97.4 530 24.3
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 1.3e-17 95.5 387 25.3
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 2.2e-17 94.7 225 30.2
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 2.2e-17 94.7 383 25.6
DCAR_005809 Daucus carota HOM05D007164 ORTHO05D008802 2.8e-17 94.4 377 27.9
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 2.8e-17 94.4 338 29.0
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 4.9e-17 93.6 386 24.1
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 4.9e-17 93.6 235 29.8
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 4.9e-17 93.6 239 30.1
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 8.3e-17 92.8 200 32.0
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 1.8e-16 91.7 176 34.7
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 9.1e-16 89.4 138 37.7
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 2.7e-15 87.8 260 27.7
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 5.9e-15 86.7 206 36.9
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 1.0e-14 85.9 196 32.1
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 1.5e-13 82.0 245 29.0
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 6.1e-12 76.6 161 31.1
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 1.8e-11 75.1 361 24.4
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 3.0e-11 74.3 99 37.4
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 4.9e-09 67.0 283 27.2
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 7.0e-08 63.2 146 30.1
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 1.6e-07 62.0 151 33.1
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 2.9e-06 57.8 108 36.1
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 6.6e-06 56.6 174 24.7


User provided reference genes

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