Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g01070 Coffea canephora HOM05D007813 ORTHO05D009861 3.4e-96 355.1 199 100.0
MSTRG.2075 Avicennia marina HOM05D007813 ORTHO05D009861 4.4e-27 125.6 186 47.8
Peaxi162Scf00643g00047 Petunia axillaris HOM05D007813 ORTHO05D009861 4.1e-25 119.0 203 47.8
Thhalv10026382m.g Eutrema salsugineum HOM05D007813 ORTHO05D009861 7.0e-25 118.2 154 48.1
C01p19700 Brassica napus HOM05D007813 ORTHO05D009861 1.7e-23 113.6 150 48.0
BolC1t01897H Brassica oleracea HOM05D007813 ORTHO05D009861 1.7e-23 113.6 150 48.0
Oeu039115.1 Olea europaea HOM05D007813 ORTHO05D009861 1.7e-23 113.6 194 43.8
BraA01t01511Z Brassica rapa HOM05D007813 ORTHO05D009861 3.8e-23 112.5 149 47.7
A01p15750 Brassica napus HOM05D007813 ORTHO05D009861 1.5e-22 110.5 150 47.3
CARHR231780 Cardamine hirsuta HOM05D007813 ORTHO05D009861 4.3e-22 109.0 149 48.3
Carub.0007s1668 Capsella rubella HOM05D007813 ORTHO05D009861 5.6e-22 108.6 152 47.4
Sc06g0009980 Simmondsia chinensis HOM05D007813 ORTHO05D009861 5.6e-22 108.6 187 46.5
PGSC0003DMG400031169 Solanum tuberosum HOM05D007813 ORTHO05D009861 5.6e-22 108.6 155 54.8
AT4G24370 Arabidopsis thaliana HOM05D007813 ORTHO05D009861 6.1e-21 105.1 168 43.5
Sp7g22350 Schrenkiella parvula HOM05D007813 ORTHO05D009861 6.1e-21 105.1 162 48.1
Actinidia04359 Actinidia chinensis HOM05D007813 ORTHO05D009861 8.0e-21 104.8 172 40.1
EL10Ac9g22652 Beta vulgaris HOM05D000001 ORTHO05D000003 1.0e-20 104.4 211 41.7
Sopen01g035700 Solanum pennellii HOM05D007813 ORTHO05D009861 1.0e-20 104.4 195 48.2
DCAR_023485 Daucus carota HOM05D007813 ORTHO05D009861 1.4e-20 104.0 162 45.1
AL7G28850 Arabidopsis lyrata HOM05D007813 ORTHO05D009861 5.2e-20 102.1 150 46.0
Nitab4.5_0000146g0130 Nicotiana tabacum HOM05D007813 ORTHO05D009861 5.2e-20 102.1 154 45.5
Aa31LG4G9500 Aethionema arabicum HOM05D007813 ORTHO05D009861 8.9e-20 101.3 166 42.2
Hund21950 Selenicereus undatus HOM05D007813 ORTHO05D009861 2.6e-19 99.8 178 43.3
Nitab4.5_0003448g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 3.4e-19 99.4 157 51.0
Nitab4.5_0006894g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 9.8e-19 97.8 157 47.8
Nitab4.5_0008487g0020 Nicotiana tabacum HOM05D007813 ORTHO05D009861 2.2e-18 96.7 157 50.3
Atru.chr11.1262 Acer truncatum HOM05D007813 ORTHO05D009861 3.7e-18 95.9 163 42.9
ClCG01G008030 Citrullus lanatus HOM05D007813 ORTHO05D009861 3.7e-18 95.9 167 41.3
unitig_699.g19640 Utricularia gibba HOM05D007813 ORTHO05D009861 3.7e-18 95.9 153 45.8
Ciclev10032850m.g Citrus clementina HOM05D007813 ORTHO05D009861 4.9e-18 95.5 165 43.0
Duzib248G1033 Durio zibethinus HOM05D007813 ORTHO05D009861 4.9e-18 95.5 175 41.1
Lj9P278T15 Lonicera japonica HOM05D007813 ORTHO05D009861 1.1e-17 94.4 167 43.7
MELO3C005074.2 Cucumis melo HOM05D007813 ORTHO05D009861 1.4e-17 94.0 170 41.8
Ah.01g003370 Amaranthus hybridus HOM05D007813 ORTHO05D009861 1.8e-17 93.6 172 40.7
TWI53G2082 Tripterygium wilfordii HOM05D007813 ORTHO05D009861 1.8e-17 93.6 169 42.0
CsaV3_5G021820 Cucumis sativus L. HOM05D007813 ORTHO05D009861 2.4e-17 93.2 161 42.9
FAN07G2714 Fragaria x ananassa HOM05D007813 ORTHO05D009861 4.1e-17 92.4 156 45.5
Nitab4.5_0001077g0010 Nicotiana tabacum HOM05D007813 ORTHO05D009861 5.4e-17 92.0 156 44.2
Thecc.02G153800 Theobroma cacao HOM05D007813 ORTHO05D009861 7.0e-17 91.7 178 39.9
SGA_v2.0_scaffold5G02767 Striga asiatica HOM05D007813 ORTHO05D009861 9.2e-17 91.3 194 39.2
FAN17G2972 Fragaria x ananassa HOM05D007813 ORTHO05D009861 1.2e-16 90.9 152 44.7
FvH4_4g37240 Fragaria vesca HOM05D007813 ORTHO05D009861 1.6e-16 90.5 157 40.8
Cpa.g.sc30.28 Carica papaya HOM05D007813 ORTHO05D009861 2.7e-16 89.7 169 42.6
Migut.E00672 Erythranthe guttata HOM05D007813 ORTHO05D009861 2.7e-16 89.7 140 46.4
Aqoxy7G00887 Aquilegia oxysepala HOM05D007813 ORTHO05D009861 4.6e-16 89.0 164 43.3
HanXRQChr11g0332791 Helianthus annuus HOM05D007813 ORTHO05D009861 5.9e-16 88.6 163 39.9
BcaC09g50873 Brassica carinata HOM05D007813 ORTHO05D009861 7.8e-16 88.2 136 44.9
Lsat_1_v5_gn_6_66140 Lactuca sativa HOM05D007813 ORTHO05D009861 1.3e-15 87.4 175 40.0
Manes.11G001000 Manihot esculenta HOM05D007813 ORTHO05D009861 1.7e-15 87.0 178 40.4
COL.COLO4_33123 Corchorus olitorius HOM05D007813 ORTHO05D009861 2.3e-15 86.7 168 40.5
PSO717G0067 Papaver somniferum HOM05D007813 ORTHO05D009861 2.3e-15 86.7 153 41.8
Nn3g16575 Nelumbo nucifera HOM05D007813 ORTHO05D009861 3.0e-15 86.3 156 48.1
AUR62014985 Chenopodium quinoa HOM05D007813 ORTHO05D009861 3.9e-15 85.9 161 41.6
CANSAT78G1292 Cannabis sativa HOM05D007813 ORTHO05D009861 1.1e-14 84.3 174 42.5
MD13G1002400 Malus domestica HOM05D007813 ORTHO05D009861 1.1e-14 84.3 151 46.4
PSO675G5803 Papaver somniferum HOM05D007813 ORTHO05D009861 1.5e-14 84.0 167 40.1
Solyc01g089857.1 Solanum lycopersicum HOM05D007813 ORTHO05D009861 1.5e-14 84.0 110 50.9
CiPaw.16G001800 Carya illinoinensis HOM05D007813 ORTHO05D009861 2.5e-14 83.2 172 44.8
QL01p000818 Quercus lobata HOM05D007813 ORTHO05D009861 3.3e-14 82.8 152 45.4
Sed0004061 Sechium edule HOM05D007813 ORTHO05D009861 3.3e-14 82.8 166 39.2
RcHm_v2.0_Chr4g0447031 Rosa chinensis HOM05D007813 ORTHO05D009861 4.3e-14 82.4 153 44.4
TAR374G1573 Trochodendron aralioides HOM05D007813 ORTHO05D009861 5.6e-14 82.0 155 43.2
Gohir.A03G167400 Gossypium hirsutum HOM05D007813 ORTHO05D009861 7.3e-14 81.6 184 38.0
Gohir.D02G190500 Gossypium hirsutum HOM05D007813 ORTHO05D009861 7.3e-14 81.6 188 37.2
RhsimUnG0102800 Rhododendron simsii HOM05D007813 ORTHO05D009861 7.3e-14 81.6 156 40.4
Gorai.005G213200 Gossypium raimondii HOM05D007813 ORTHO05D009861 9.5e-14 81.3 184 38.6
Prupe.1G350000 Prunus persica HOM05D007813 ORTHO05D009861 9.5e-14 81.3 161 41.0
CDE02G1922 Ceratophyllum demersum HOM05D000644 ORTHO05D000504 2.8e-13 79.7 171 38.0
Nitab4.5_0004221g0010 Nicotiana tabacum HOM05D007813 ORTHO05D009861 2.8e-13 79.7 136 44.9
ECA233G3331 Erigeron canadensis HOM05D007813 ORTHO05D009861 4.7e-13 79.0 173 37.6
Sabra07G0000100 Salix brachista HOM05D007813 ORTHO05D009861 8.0e-13 78.2 174 36.8
Dinv01363 Davidia involucrata HOM05D007813 ORTHO05D009861 1.8e-12 77.0 191 37.7
Haze_17409 Corylus avellana HOM05D001339 ORTHO05D003609 3.1e-12 76.3 160 39.4
Lj2g0017100 Lotus japonicus HOM05D007813 ORTHO05D009861 7.5e-11 71.6 161 36.6
Lalb_Chr04g0259041 Lupinus albus HOM05D007813 ORTHO05D009861 9.8e-11 71.2 169 37.3
HPP92_002530 Vanilla planifolia HOM05D007813 ORTHO05D009861 2.9e-10 69.7 165 34.5
Lju470C5T0 Lonicera japonica HOM05D007813 ORTHO05D009861 4.9e-10 68.9 167 40.1
AUR62029135 Chenopodium quinoa HOM05D007813 ORTHO05D009861 4.1e-09 65.9 170 35.3
Psat4g167360 Pisum sativum HOM05D007813 ORTHO05D009861 3.5e-08 62.8 174 35.6
Nitab4.5_0007508g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 3.9e-07 59.3 68 51.5
Nitab4.5_0003697g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 6.6e-07 58.5 73 52.1
Glyma.09G285400 Glycine max HOM05D007813 ORTHO05D009861 3.3e-06 56.2 169 33.7


User provided reference genes

Program Settings