Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 3.8e-42 174.5 91 100.0
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 3.3e-38 161.4 91 90.1
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 7.4e-38 160.2 91 91.2
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 6.2e-37 157.1 86 95.3
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 8.1e-37 156.8 83 95.2
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 2.4e-36 155.2 95 86.3
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 3.1e-36 154.8 86 94.2
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 5.3e-36 154.1 86 93.0
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 5.3e-36 154.1 90 88.9
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 5.3e-36 154.1 83 92.8
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 9.0e-36 153.3 83 92.8
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 1.2e-35 152.9 90 86.7
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 1.5e-35 152.5 95 85.3
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 1.5e-35 152.5 86 91.9
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 2.0e-35 152.1 90 86.7
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.0e-35 152.1 87 86.2
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.6e-35 151.8 86 91.9
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.6e-35 151.8 86 91.9
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 2.6e-35 151.8 86 91.9
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 2.6e-35 151.8 89 86.5
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 4.5e-35 151.0 86 91.9
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 5.8e-35 150.6 90 86.7
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 5.8e-35 150.6 90 84.4
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 7.6e-35 150.2 83 90.4
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 7.6e-35 150.2 90 86.7
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 7.6e-35 150.2 90 86.7
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 9.9e-35 149.8 85 88.2
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.3e-34 149.4 83 91.6
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 1.7e-34 149.1 83 91.6
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.7e-34 149.1 83 88.0
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 2.2e-34 148.7 90 85.6
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 2.9e-34 148.3 90 85.6
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 2.9e-34 148.3 86 90.7
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 3.8e-34 147.9 96 80.2
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 3.8e-34 147.9 84 91.7
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 3.8e-34 147.9 84 85.7
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 3.8e-34 147.9 86 88.4
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 4.9e-34 147.5 86 84.9
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 6.4e-34 147.1 96 82.3
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 8.4e-34 146.7 81 90.1
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 8.4e-34 146.7 86 89.5
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 1.4e-33 146.0 82 89.0
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 1.9e-33 145.6 95 81.1
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 1.9e-33 145.6 90 82.2
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 3.2e-33 144.8 91 83.5
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 3.2e-33 144.8 90 84.4
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.2e-33 144.8 89 83.1
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 4.2e-33 144.4 79 92.4
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 4.2e-33 144.4 81 88.9
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 4.2e-33 144.4 83 86.7
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 5.5e-33 144.1 95 80.0
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 5.5e-33 144.1 90 83.3
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 7.1e-33 143.7 90 80.0
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 7.1e-33 143.7 88 83.0
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 1.2e-32 142.9 85 88.2
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 1.2e-32 142.9 83 89.2
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 1.6e-32 142.5 90 83.3
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 2.1e-32 142.1 86 81.4
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 2.7e-32 141.7 84 81.0
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 2.7e-32 141.7 85 81.2
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 2.7e-32 141.7 92 79.3
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 3.5e-32 141.4 86 84.9
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 4.6e-32 141.0 95 77.9
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.0e-31 139.8 105 74.3
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 1.3e-31 139.4 84 81.0
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.8e-31 139.0 90 80.0
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 2.3e-31 138.7 91 78.0
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.3e-31 138.7 91 78.0
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.0e-31 138.3 104 75.0
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 3.0e-31 138.3 85 84.7
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 3.0e-31 138.3 93 79.6
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 8.7e-31 136.7 90 80.0
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 1.5e-30 136.0 91 76.9
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 4.3e-30 134.4 74 87.8
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 5.6e-30 134.0 87 79.3
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 9.6e-30 133.3 84 79.8
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 9.6e-30 133.3 90 75.6
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 9.6e-30 133.3 91 75.8
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.3e-29 132.9 90 73.3
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.3e-29 132.9 90 73.3
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.3e-29 132.9 90 73.3
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 1.6e-29 132.5 107 69.2
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 2.1e-29 132.1 91 73.6
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 2.1e-29 132.1 91 73.6
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 2.1e-29 132.1 91 73.6
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 3.7e-29 131.3 83 79.5
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 6.2e-29 130.6 99 71.7
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 6.2e-29 130.6 109 67.0
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 6.2e-29 130.6 72 91.7
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-28 129.8 86 76.7
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 1.1e-28 129.8 86 75.6
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.4e-28 129.4 84 77.4
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 1.4e-28 129.4 86 74.4
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 5.3e-28 127.5 146 53.4
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.0e-27 125.6 93 69.9
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 2.6e-27 125.2 90 68.9
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 2.6e-27 125.2 93 75.3
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 3.4e-27 124.8 77 77.9
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 3.4e-27 124.8 90 68.9
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 4.5e-27 124.4 90 68.9
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 4.5e-27 124.4 90 68.9
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 4.5e-27 124.4 90 68.9
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 4.5e-27 124.4 90 68.9
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 7.6e-27 123.6 78 85.9
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 1.0e-26 123.2 91 70.3
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 1.0e-26 123.2 78 84.6
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 1.7e-26 122.5 72 91.7
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 1.7e-26 122.5 76 75.0
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 1.7e-26 122.5 76 82.9
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 2.2e-26 122.1 86 72.1
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 2.2e-26 122.1 79 82.3
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.1e-25 119.8 76 81.6
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 1.4e-25 119.4 82 78.0
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.9e-25 119.0 93 66.7
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 7.1e-25 117.1 64 89.1
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 1.0e-23 113.2 67 82.1
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 3.3e-22 108.2 66 78.8
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 2.8e-21 105.1 69 76.8
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 1.0e-18 96.7 85 64.7
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 2.2e-18 95.5 84 60.7
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 5.0e-18 94.4 83 67.5
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 3.6e-16 88.2 57 80.7
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 2.5e-14 82.0 68 57.4
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 4.3e-14 81.3 47 83.0
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 1.3e-13 79.7 62 59.7
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 6.9e-12 73.9 60 65.0
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 4.5e-11 71.2 64 54.7
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 2.2e-10 68.9 61 59.0
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 1.0e-07 60.1 48 60.4
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 1.0e-07 60.1 48 60.4
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 1.0e-07 60.1 48 60.4


User provided reference genes

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