Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g14960 Coffea canephora HOM05D002879 ORTHO05D002930 2.0e-19 99.4 120 100.0
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.3e-10 69.3 95 72.6
Cc10_g14940 Coffea canephora HOM05D002879 ORTHO05D002930 5.0e-10 68.2 94 80.9
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.1e-09 67.0 97 67.0
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 5.5e-09 64.7 84 69.0
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 5.5e-09 64.7 84 69.0
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 7.2e-09 64.3 97 75.3
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 7.2e-09 64.3 98 43.9
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 9.5e-09 63.9 94 62.8
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.2e-08 63.5 97 77.3
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.2e-08 63.5 97 77.3
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.2e-08 63.5 84 71.4
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.1e-08 62.8 88 55.7
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 2.8e-08 62.4 98 60.2
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.6e-08 62.0 88 55.7
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 6.1e-08 61.2 87 85.1
Oeu046050.1 Olea europaea HOM05D002879 ORTHO05D002930 1.4e-07 60.1 66 86.4
QL02p029925 Quercus lobata HOM05D002879 ORTHO05D002930 1.4e-07 60.1 63 73.0
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 2.3e-07 59.3 93 44.1
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 3.0e-07 58.9 66 77.3
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.0e-07 58.5 88 80.7
AUR62040592 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.0e-07 58.5 88 86.4
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 5.2e-07 58.2 66 74.2
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 6.8e-07 57.8 68 85.3
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 6.8e-07 57.8 64 65.6
COL.COLO4_29859 Corchorus olitorius HOM05D002879 ORTHO05D002930 1.2e-06 57.0 66 80.3
arahy.Tifrunner.gnm1.ann1.HFKS8W Arachis hypogaea HOM05D002879 ORTHO05D002930 1.5e-06 56.6 62 85.5
arahy.Tifrunner.gnm1.ann1.MR10IA Arachis hypogaea HOM05D002879 ORTHO05D002930 1.5e-06 56.6 62 85.5
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 1.5e-06 56.6 88 79.5
FAN15G0525 Fragaria x ananassa HOM05D002879 ORTHO05D002930 2.0e-06 56.2 68 82.4
Prupe.8G034200 Prunus persica HOM05D002879 ORTHO05D002930 2.0e-06 56.2 66 83.3
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.0e-06 56.2 92 65.2
Ca_12311_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 2.6e-06 55.8 65 84.6
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 3.4e-06 55.5 97 58.8
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 3.4e-06 55.5 88 63.6
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 3.4e-06 55.5 66 68.2
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 3.4e-06 55.5 92 56.5
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.4e-06 55.1 64 79.7
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 4.4e-06 55.1 64 76.6
Sopen04g027610 Solanum pennellii HOM05D002879 ORTHO05D002930 5.7e-06 54.7 66 80.3
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 7.5e-06 54.3 68 82.4
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.5e-06 54.3 88 63.6
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.5e-06 54.3 88 63.6
Lj2g0004069 Lotus japonicus HOM05D002879 ORTHO05D002930 9.8e-06 53.9 63 71.4


User provided reference genes

Program Settings