Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g14940 Coffea canephora HOM05D002879 ORTHO05D002930 9.2e-30 133.7 114 100.0
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.8e-10 68.9 89 59.6
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.8e-10 68.2 98 65.3
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 4.8e-10 68.2 98 65.3
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.4e-09 65.9 98 65.3
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.1e-09 65.5 89 58.4
Cc10_g14960 Coffea canephora HOM05D002879 ORTHO05D002930 6.9e-09 64.3 94 80.9
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 1.2e-08 63.5 114 56.1
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 1.2e-08 63.5 111 45.9
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.2e-08 63.5 89 46.1
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.6e-08 62.4 97 69.1
TAR381G1351 Trochodendron aralioides HOM05D002879 ORTHO05D002930 2.6e-08 62.4 116 69.8
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 3.4e-08 62.0 111 44.1
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 3.4e-08 62.0 88 52.3
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 4.5e-08 61.6 85 58.8
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 5.8e-08 61.2 93 44.1
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.3e-07 60.1 94 72.3
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 2.9e-07 58.9 114 66.7
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 3.8e-07 58.5 91 78.0
arahy.Tifrunner.gnm1.ann1.HFKS8W Arachis hypogaea HOM05D002879 ORTHO05D002930 8.4e-07 57.4 89 82.0
arahy.Tifrunner.gnm1.ann1.MR10IA Arachis hypogaea HOM05D002879 ORTHO05D002930 8.4e-07 57.4 89 83.1
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 8.4e-07 57.4 89 74.2
QL02p029925 Quercus lobata HOM05D002879 ORTHO05D002930 8.4e-07 57.4 60 71.7
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.1e-06 57.0 85 63.5
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 1.1e-06 57.0 88 60.2
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.4e-06 56.6 89 77.5
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.4e-06 56.6 99 71.7
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.4e-06 56.6 92 62.0
PGR044G2207 Punica granatum HOM05D002879 ORTHO05D002930 1.9e-06 56.2 144 56.9
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 2.4e-06 55.8 98 59.2
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 7.1e-06 54.3 89 50.6
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 9.3e-06 53.9 91 62.6
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 9.3e-06 53.9 98 69.4
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 9.3e-06 53.9 98 69.4
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 9.3e-06 53.9 86 55.8
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 9.3e-06 53.9 111 53.2


User provided reference genes

Program Settings